Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21503 | Canola | nucleus | 88.99 | 87.97 |
| Bra000557.1-P | Field mustard | nucleus | 87.25 | 86.49 |
| CDX83217 | Canola | nucleus | 87.25 | 80.7 |
| KRH05436 | Soybean | nucleus | 54.78 | 53.24 |
| KRH15573 | Soybean | nucleus | 55.36 | 52.47 |
| KRH61515 | Soybean | nucleus | 55.07 | 51.08 |
| VIT_04s0008g01110.t01 | Wine grape | nucleus | 57.1 | 50.77 |
| GSMUA_Achr2P16660_001 | Banana | nucleus | 39.71 | 50.18 |
| PGSC0003DMT400021234 | Potato | nucleus | 51.01 | 49.86 |
| GSMUA_Achr6P00960_001 | Banana | nucleus | 41.74 | 46.01 |
| AT3G51910.1 | Thale cress | nucleus | 35.65 | 45.22 |
| AT5G43840.1 | Thale cress | nucleus | 32.46 | 39.72 |
| AT3G63350.1 | Thale cress | nucleus | 31.59 | 38.65 |
| Os06t0565200-00 | Rice | nucleus | 36.81 | 38.37 |
| TraesCS7B01G267300.1 | Wheat | nucleus | 35.94 | 35.13 |
| AT3G22830.1 | Thale cress | nucleus | 41.16 | 34.98 |
| Zm00001d046204_P001 | Maize | nucleus | 36.52 | 34.52 |
| TraesCS7A01G360400.1 | Wheat | nucleus | 35.07 | 33.8 |
| Os01t0571300-01 | Rice | mitochondrion, nucleus | 37.68 | 32.34 |
| HORVU7Hr1G087690.1 | Barley | nucleus | 34.2 | 32.33 |
| EES00942 | Sorghum | plastid | 35.94 | 31.47 |
| AT5G54070.1 | Thale cress | nucleus | 28.7 | 29.91 |
| KXG20211 | Sorghum | nucleus | 35.07 | 29.02 |
| AT3G24520.1 | Thale cress | nucleus | 27.25 | 28.48 |
| AT5G16820.2 | Thale cress | nucleus | 39.13 | 28.07 |
| Zm00001d044259_P001 | Maize | plastid | 30.43 | 27.85 |
| AT3G02990.1 | Thale cress | nucleus | 37.1 | 27.35 |
| AT1G32330.1 | Thale cress | nucleus | 38.26 | 27.22 |
| AT4G17750.1 | Thale cress | nucleus | 38.26 | 26.67 |
| AT5G45710.3 | Thale cress | nucleus | 25.8 | 25.8 |
| AT5G03720.1 | Thale cress | nucleus | 29.86 | 25.0 |
| AT4G18880.1 | Thale cress | nucleus | 28.99 | 24.94 |
| AT4G13980.1 | Thale cress | nucleus | 29.57 | 21.89 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | EntrezGene:817155 | ProteinID:AAC31222.1 | ProteinID:AEC07800.1 | EMBL:AK118744 |
| ProteinID:ANM62674.1 | ArrayExpress:AT2G26150 | EnsemblPlantsGene:AT2G26150 | RefSeq:AT2G26150 | TAIR:AT2G26150 | RefSeq:AT2G26150-TAIR-G |
| EnsemblPlants:AT2G26150.1 | TAIR:AT2G26150.1 | Symbol:ATHSFA2 | GO:GO:0001666 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009408 | GO:GO:0009628 |
| GO:GO:0009644 | GO:GO:0009719 | GO:GO:0009987 | GO:GO:0010200 | GO:GO:0010286 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0034605 | GO:GO:0034620 | GO:GO:0042542 | GO:GO:0043565 | GO:GO:0044212 |
| GO:GO:0045893 | GO:GO:0071456 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | RefSeq:NP_001324815.1 |
| RefSeq:NP_180184.1 | UniProt:O80982 | PFAM:PF00447 | PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001185 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025281 | PRINTS:PR00056 | ScanProsite:PS00434 | PANTHER:PTHR10015 |
| PANTHER:PTHR10015:SF186 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0000052A12 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf |
| SEG:seg | : | : | : | : | : |
Description
HSFA2Heat stress transcription factor A-2 [Source:UniProtKB/Swiss-Prot;Acc:O80982]
Coordinates
chr2:+:11135624..11137792
Molecular Weight (calculated)
39116.4 Da
IEP (calculated)
4.898
GRAVY (calculated)
-0.580
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MEELKVEMEE ETVTFTGSVA ASSSVGSSSS PRPMEGLNET GPPPFLTKTY EMVEDPATDT VVSWSNGRNS FVVWDSHKFS TTLLPRYFKH SNFSSFIRQL
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.