Factsheet for Os01t0571300-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

plastid 3
nucleus 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0571300-01
Os04t0107900-02
Os06t0565200-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26150.1	Os01t0571300-01	AT2G26150.1	21510947
AT2G26150.1	Os06t0565200-00	AT2G26150.1	21510947
AT2G26150.1	Os04t0107900-02	AT5G52640.1	19366428

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00942	Sorghum	plastid	60.45	61.68
Zm00001d044259_P001	Maize	plastid	53.23	56.76
GSMUA_Achr2P16660_001	Banana	nucleus	27.11	39.93
AT2G26150.1	Thale cress	nucleus	32.34	37.68
Bra000557.1-P	Field mustard	nucleus	31.84	36.78
GSMUA_Achr6P00960_001	Banana	nucleus	28.36	36.42
CDY21503	Canola	nucleus	31.59	36.39
Os06t0565200-00	Rice	nucleus	28.86	35.05
Os10t0419300-00	Rice	nucleus	31.09	34.92
CDX83217	Canola	nucleus	32.09	34.58
Os01t0733200-01	Rice	nucleus	21.39	34.4
Os07t0178600-01	Rice	nucleus	31.59	34.14
Os03t0161900-02	Rice	nucleus	31.59	33.51
PGSC0003DMT400021234	Potato	nucleus	29.1	33.14
VIT_04s0008g01110.t01	Wine grape	nucleus	31.84	32.99
KRH05436	Soybean	nucleus	29.1	32.96
KRH15573	Soybean	nucleus	28.36	31.32
KRH61515	Soybean	nucleus	28.86	31.18
Os02t0232000-01	Rice	nucleus	22.64	30.54
Os03t0224700-01	Rice	nucleus	28.11	27.56
Os01t0625300-01	Rice	nucleus	22.89	27.14
Os03t0854500-01	Rice	nucleus	29.85	23.72
Os05t0530400-01	Rice	nucleus	26.37	23.09
Os02t0496100-01	Rice	nucleus	27.11	22.95
Os02t0527300-01	Rice	nucleus	28.11	22.69
Os01t0749300-02	Rice	nucleus	22.89	20.91

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	EntrezGene:4326351	EMBL:AK064271	ProteinID:BAD45089.1	ProteinID:BAF05292.1
ProteinID:BAS72792.1	ncoils:Coil	ProteinID:EAZ12398.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388	EnsemblPlantsGene:Os01g0571300
EnsemblPlants:Os01t0571300-01	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF195
UniProt:Q657C0	SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI000043A1AC	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf
RefSeq:XP_015631502.1	SEG:seg	:	:	:	:

Description

HEAT STRESS TRANSCRIPTION FACTOR A7Similar to Heat shock transcription factor 31 (Fragment). (Os01t0571300-01)

Coordinates

chr1:+:21938865..21941797

Molecular Weight (calculated)

43914.5 Da

IEP (calculated)

7.473

GRAVY (calculated)

-0.386

Length

402 amino acids

Sequence
(BLAST)

001: MLKPQTPRAR RAAHPNSHMA SSSSSSSLCR LLIPRPTTRR FSGGGGEGGM AAAAPVKREV KPEAGEGWGG GDLGVVPPPP RPMEGLGEAG PAPFVAKTYE
101: MVADAATDAV VSWGPGGSGA SFVVWDPHAL AAGVLPRFFK HANFSSFVRQ LNTYGFRKVT PDRWEFANEA FLAGQKHLLK NIKRRRVSKP LVDSQLRNKA
201: SVVFGQPEAP GEVVSLKRDR AALRAEVIML KQQYNACKSQ LIAMEEMVRN IERRQQQTIG FFAKVLTNPA FVQQVLLNYV NKNGLRGAAK RQRLMENEEQ
301: HADSPLNKGM EAASVMEADV SPGSTGCGTV GKVETTPMCN FQNIENMCDD VWEELDALPE TGMEQEEKAG IGSFDVEEFV GRPCGWVDDC PYLVEPMQFV
401: EH

Best Arabidopsis Sequence Match ( AT3G63350.1 )
(BLAST)

001: MDPSSSSRAR SMPPPVPMEG LQEAGPSPFL TKTFEMVGDP NTNHIVSWNR GGISFVVWDP HSFSATILPL YFKHNNFSSF VRQLNTYGFR KIEAERWEFM
101: NEGFLMGQRD LLKSIKRRTS SSSPPSLNYS QSQPEAHDPG VELPQLREER HVLMMEISTL RQEEQRARGY VQAMEQRING AEKKQRHMMS FLRRAVENPS
201: LLQQIFEQKR DREEAAMIDQ AGLIKMEEVE HLSELEALAL EMQGYGRQRT DGVERELDDG FWEELLMNNE NSDEEEANVK QD

Arabidopsis Description

HSFA7BHeat stress transcription factor A-7b [Source:UniProtKB/Swiss-Prot;Acc:Q9M1V5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.