CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 5
plastid 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES00942
EES11741
KXG20211

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26150.1	EES00942	AT2G26150.1	21510947
AT2G26150.1	KXG20211	AT2G26150.1	21510947
AT2G26150.1	EES11741	AT5G52640.1	19366428

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044259_P001	Maize	plastid	77.92	81.43
Os01t0571300-01	Rice	mitochondrion, nucleus	61.68	60.45
GSMUA_Achr2P16660_001	Banana	nucleus	26.65	38.46
AT2G26150.1	Thale cress	nucleus	31.47	35.94
Bra000557.1-P	Field mustard	nucleus	30.96	35.06
CDY21503	Canola	nucleus	30.71	34.67
GSMUA_Achr6P00960_001	Banana	nucleus	27.41	34.5
KXG33312	Sorghum	nucleus	22.34	33.85
EER94213	Sorghum	nucleus	30.71	33.43
EER93298	Sorghum	nucleus	28.43	33.04
CDX83217	Canola	nucleus	31.22	32.98
KXG29862	Sorghum	nucleus	22.08	32.58
PGSC0003DMT400021234	Potato	nucleus	29.19	32.58
VIT_04s0008g01110.t01	Wine grape	nucleus	31.98	32.47
KRH05436	Soybean	nucleus	29.19	32.39
EER90889	Sorghum	nucleus	30.46	32.34
EER95940	Sorghum	nucleus	30.2	31.99
KRH15573	Soybean	nucleus	28.68	31.04
EER89919	Sorghum	nucleus	21.32	30.11
KRH61515	Soybean	nucleus	28.17	29.84
EER95463	Sorghum	nucleus	29.44	29.67
EER95242	Sorghum	nucleus	30.46	28.92
KXG20211	Sorghum	nucleus	26.65	25.18
EES01103	Sorghum	nucleus	21.07	22.74
EER93074	Sorghum	nucleus	30.2	22.58
EES01479	Sorghum	nucleus	24.11	21.89
EES05094	Sorghum	nucleus	26.9	21.86
EES06898	Sorghum	nucleus	27.16	21.57
EES18551	Sorghum	nucleus	24.87	20.59

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	EntrezGene:8078621	UniProt:C5XNS0	ncoils:Coil	EnsemblPlants:EES00942
ProteinID:EES00942	ProteinID:EES00942.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434
PANTHER:PTHR10015	PANTHER:PTHR10015:SF195	SMART:SM00415	EnsemblPlantsGene:SORBI_3003G194400	SUPFAM:SSF46785	UniParc:UPI0001A84887
InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	RefSeq:XP_002455822.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:51702125..51705116

Molecular Weight (calculated)

42739.4 Da

IEP (calculated)

7.092

GRAVY (calculated)

-0.443

Length

394 amino acids

Sequence
(BLAST)

001: MGSSSCPLSG SPGPSGSNSK PRTTARASGV GFGGVAMARS VAVAAVKLEP KPEPWAAGAE EASSVVPRSM EGPPLPAPFV SKTYEMVADA ATDAVVSWAP
101: GGAGNSFVVW DPRALAAGIL PRFFKHANFA SFIRQLNIYG FRKVNPDRWE FANESFLAGQ KHLLKNIKRR RASKPQMEAK PRNCAGACLG SPKDPSEVES
201: LKRDRAALRA EVITLRQQYN ICKSQLVALE ERILNNERNQ QRAIAFFAKV LSNPGFVQQV LLNYAKEKEL RGASKRQRLM ENEEHRHGDL PLRSGTEAAF
301: ATVAAGVGVS AGSSHGGTAA KQEPGPELNG QEMDSIWYDV WDELDAIPGA EMDRREADKG VAGFDVEDFS GRPCGWDDDC SYLAEPMQFV EHYD

Best Arabidopsis Sequence Match ( AT2G26150.1 )
(BLAST)

001: MEELKVEMEE ETVTFTGSVA ASSSVGSSSS PRPMEGLNET GPPPFLTKTY EMVEDPATDT VVSWSNGRNS FVVWDSHKFS TTLLPRYFKH SNFSSFIRQL
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP

Arabidopsis Description

HSFA2Heat stress transcription factor A-2 [Source:UniProtKB/Swiss-Prot;Acc:O80982]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.