Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d033987_P001 | Maize | nucleus | 87.06 | 87.06 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 65.77 | 65.77 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 64.96 | 64.78 |
| TraesCS5D01G393200.1 | Wheat | nucleus | 65.77 | 64.72 |
| Solyc06g053960.2.1 | Tomato | nucleus | 22.91 | 59.86 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 39.35 | 50.34 |
| EER94213 | Sorghum | nucleus | 47.44 | 48.62 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 42.59 | 47.31 |
| CDX95313 | Canola | nucleus | 33.69 | 46.64 |
| EER95463 | Sorghum | nucleus | 48.52 | 46.04 |
| EER93298 | Sorghum | nucleus | 42.05 | 46.02 |
| AT3G51910.1 | Thale cress | nucleus | 33.42 | 45.59 |
| Bra012829.1-P | Field mustard | nucleus | 30.46 | 45.56 |
| EER95940 | Sorghum | nucleus | 45.28 | 45.16 |
| VIT_00s0179g00150.t01 | Wine grape | nucleus | 43.13 | 44.32 |
| KRG91367 | Soybean | nucleus | 43.13 | 43.72 |
| Bra012828.1-P | Field mustard | nucleus | 31.54 | 43.49 |
| CDX90626 | Canola | nucleus | 31.54 | 43.49 |
| CDY29054 | Canola | nucleus | 31.0 | 43.4 |
| KRH32059 | Soybean | nucleus | 39.62 | 43.11 |
| KRH31657 | Soybean | nucleus | 39.08 | 43.03 |
| KRG95588 | Soybean | nucleus | 42.86 | 42.97 |
| VIT_05s0020g04090.t01 | Wine grape | nucleus | 39.62 | 41.76 |
| CDX90627 | Canola | nucleus | 32.08 | 41.46 |
| KRH67266 | Soybean | nucleus | 42.86 | 41.19 |
| Solyc09g082670.2.1 | Tomato | nucleus | 38.81 | 40.45 |
| KRH35452 | Soybean | nucleus | 39.89 | 40.44 |
| PGSC0003DMT400049793 | Potato | nucleus | 39.62 | 40.38 |
| PGSC0003DMT400041944 | Potato | nucleus | 37.2 | 40.12 |
| AT3G63350.1 | Thale cress | nucleus | 30.46 | 40.07 |
| Solyc09g065660.2.1 | Tomato | nucleus | 39.89 | 39.78 |
| PGSC0003DMT400049795 | Potato | nucleus | 38.54 | 39.72 |
| PGSC0003DMT400016511 | Potato | nucleus | 38.54 | 39.5 |
| CDY11470 | Canola | nucleus | 30.19 | 39.3 |
| Bra007739.1-P | Field mustard | nucleus | 30.19 | 39.3 |
| CDX94887 | Canola | nucleus | 28.57 | 39.26 |
| CDX76693 | Canola | nucleus | 29.92 | 38.95 |
| CDY14893 | Canola | nucleus | 27.22 | 38.55 |
| CDY10674 | Canola | nucleus | 40.16 | 38.3 |
| AT5G43840.1 | Thale cress | nucleus | 29.11 | 38.3 |
| Bra035993.1-P | Field mustard | nucleus | 28.3 | 37.37 |
| CDY34229 | Canola | nucleus | 38.01 | 37.2 |
| CDY10311 | Canola | nucleus | 38.54 | 36.86 |
| Bra033913.1-P | Field mustard | nucleus | 40.43 | 36.85 |
| AT3G22830.1 | Thale cress | nucleus | 40.16 | 36.7 |
| CDY46606 | Canola | nucleus | 37.74 | 36.55 |
| KXG29862 | Sorghum | nucleus | 26.15 | 36.33 |
| CDY46607 | Canola | nucleus | 35.85 | 35.85 |
| Bra023800.1-P | Field mustard | nucleus | 38.27 | 35.68 |
| Bra001885.1-P | Field mustard | nucleus | 37.47 | 35.55 |
| CDX94884 | Canola | nucleus | 27.22 | 35.19 |
| CDX92958 | Canola | nucleus | 31.81 | 34.3 |
| KXG33312 | Sorghum | nucleus | 23.45 | 33.46 |
| EER89919 | Sorghum | nucleus | 24.53 | 32.62 |
| EES00942 | Sorghum | plastid | 32.34 | 30.46 |
| KXG20211 | Sorghum | nucleus | 32.61 | 29.02 |
| EER95242 | Sorghum | nucleus | 30.19 | 26.99 |
| EES01103 | Sorghum | nucleus | 26.15 | 26.58 |
| EES06898 | Sorghum | nucleus | 34.5 | 25.81 |
| EER93074 | Sorghum | nucleus | 36.66 | 25.81 |
| EES05094 | Sorghum | nucleus | 30.46 | 23.3 |
| EES01479 | Sorghum | nucleus | 25.88 | 22.12 |
| EES18551 | Sorghum | nucleus | 26.68 | 20.8 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | EntrezGene:8085952 | UniProt:C5X177 | ncoils:Coil | EnsemblPlants:EER90889 |
| ProteinID:EER90889 | ProteinID:EER90889.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | ProteinID:OQU91007.1 | PFAM:PF00447 | PRINTS:PR00056 |
| ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF186 | SMART:SM00415 | EnsemblPlantsGene:SORBI_3001G093200 | SUPFAM:SSF46785 |
| UniParc:UPI0001A82393 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | RefSeq:XP_002463891.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:+:7170916..7173378
Molecular Weight (calculated)
40680.6 Da
IEP (calculated)
4.684
GRAVY (calculated)
-0.498
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPFHGGIVK EEEFDFDFDF TGVSAGDAAV AAAASSWAVA LPELPRPMEG LGEVGPTPFL TKTYDVVDDP NTDTVVSWGF AGNSFVVWDA NAFATVILPR
101: YFKHSNFSSF VRQLNTYGFR KVDPDRWEFA NEGFQRGQKE LLRTIKRRRP PSSPSAQQGQ APSSCLEMGR FGLDGEVHRL QRDKRILLAE VVKLRQEQQA
201: TRAQMQAMEE RITTAEQKQL QMTVFLARAL KNPSFIRMLV DRQGLGGRRR ELEDALSKKR RRPIEYHLPP DGESSGTATE AAVNDYICGL PVGVNGVAEA
301: DDDGSRLEGS GGGGDTESFW VELLSLGLEE KHLEGGGGSE EGSGADVDDD VDVLVQSIYH LNPNPGSPSG K
101: YFKHSNFSSF VRQLNTYGFR KVDPDRWEFA NEGFQRGQKE LLRTIKRRRP PSSPSAQQGQ APSSCLEMGR FGLDGEVHRL QRDKRILLAE VVKLRQEQQA
201: TRAQMQAMEE RITTAEQKQL QMTVFLARAL KNPSFIRMLV DRQGLGGRRR ELEDALSKKR RRPIEYHLPP DGESSGTATE AAVNDYICGL PVGVNGVAEA
301: DDDGSRLEGS GGGGDTESFW VELLSLGLEE KHLEGGGGSE EGSGADVDDD VDVLVQSIYH LNPNPGSPSG K
001: MEELKVEMEE ETVTFTGSVA ASSSVGSSSS PRPMEGLNET GPPPFLTKTY EMVEDPATDT VVSWSNGRNS FVVWDSHKFS TTLLPRYFKH SNFSSFIRQL
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
Arabidopsis Description
HSFA2Heat stress transcription factor A-2 [Source:UniProtKB/Swiss-Prot;Acc:O80982]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.