Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34229 | Canola | nucleus | 90.84 | 88.92 |
| CDY46606 | Canola | nucleus | 90.84 | 87.99 |
| Bra023800.1-P | Field mustard | nucleus | 90.57 | 84.42 |
| CDX94887 | Canola | nucleus | 56.33 | 77.41 |
| CDY10674 | Canola | nucleus | 75.74 | 72.24 |
| CDY10311 | Canola | nucleus | 75.2 | 71.91 |
| AT3G22830.1 | Thale cress | nucleus | 76.28 | 69.7 |
| CDX94884 | Canola | nucleus | 52.83 | 68.29 |
| CDX92958 | Canola | nucleus | 61.99 | 66.86 |
| Solyc06g053960.2.1 | Tomato | nucleus | 24.26 | 63.38 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 40.7 | 52.07 |
| KRG91367 | Soybean | nucleus | 50.94 | 51.64 |
| KRH31657 | Soybean | nucleus | 46.63 | 51.34 |
| Solyc09g082670.2.1 | Tomato | nucleus | 47.44 | 49.44 |
| KRH35452 | Soybean | nucleus | 48.52 | 49.18 |
| PGSC0003DMT400016511 | Potato | nucleus | 47.98 | 49.17 |
| CDX95313 | Canola | nucleus | 35.31 | 48.88 |
| CDX90626 | Canola | nucleus | 34.5 | 47.58 |
| PGSC0003DMT400041944 | Potato | nucleus | 43.94 | 47.38 |
| CDY29054 | Canola | nucleus | 33.42 | 46.79 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 41.51 | 46.11 |
| Os10t0419300-00 | Rice | nucleus | 44.47 | 46.09 |
| Zm00001d032923_P002 | Maize | nucleus | 43.94 | 45.66 |
| TraesCS4B01G278100.1 | Wheat | nucleus | 41.51 | 45.16 |
| TraesCS4D01G276500.1 | Wheat | nucleus | 41.51 | 45.16 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 37.2 | 44.81 |
| EER94213 | Sorghum | nucleus | 43.67 | 44.75 |
| CDX90627 | Canola | nucleus | 34.5 | 44.6 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 40.97 | 44.57 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 40.43 | 43.6 |
| VIT_05s0020g04090.t01 | Wine grape | nucleus | 41.24 | 43.47 |
| EER93298 | Sorghum | nucleus | 39.62 | 43.36 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 38.54 | 42.94 |
| HORVU1Hr1G083420.2 | Barley | nucleus | 42.59 | 42.47 |
| EER95940 | Sorghum | nucleus | 42.32 | 42.2 |
| CDY14893 | Canola | nucleus | 29.65 | 41.98 |
| Os03t0161900-02 | Rice | nucleus | 42.86 | 41.95 |
| TraesCS1A01G375600.2 | Wheat | nucleus | 41.51 | 41.85 |
| TraesCS1B01G396000.1 | Wheat | nucleus | 40.16 | 41.62 |
| CDX76693 | Canola | nucleus | 31.81 | 41.4 |
| Zm00001d018941_P001 | Maize | nucleus | 41.78 | 41.33 |
| TraesCS1D01G382900.1 | Wheat | nucleus | 40.43 | 41.21 |
| CDY11470 | Canola | nucleus | 31.54 | 41.05 |
| Os07t0178600-01 | Rice | nucleus | 40.97 | 40.86 |
| TraesCS5D01G445100.1 | Wheat | nucleus | 38.27 | 40.8 |
| TraesCS5A01G437900.1 | Wheat | nucleus | 38.01 | 40.75 |
| TraesCS5B01G440700.1 | Wheat | nucleus | 37.74 | 39.66 |
| EER95463 | Sorghum | nucleus | 41.24 | 39.13 |
| Zm00001d027757_P001 | Maize | nucleus | 40.43 | 39.06 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 38.01 | 38.01 |
| TraesCS2B01G105100.1 | Wheat | nucleus | 41.24 | 37.78 |
| TraesCS5D01G393200.1 | Wheat | nucleus | 38.01 | 37.4 |
| TraesCS2D01G087400.1 | Wheat | nucleus | 41.51 | 37.38 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 37.47 | 37.37 |
| HORVU2Hr1G014590.1 | Barley | nucleus | 41.78 | 37.08 |
| TraesCS2A01G089300.1 | Wheat | nucleus | 41.24 | 37.05 |
| CDY21503 | Canola | nucleus | 34.77 | 36.96 |
| CDY43158 | Canola | nucleus | 29.92 | 36.27 |
| Zm00001d033987_P001 | Maize | nucleus | 35.85 | 35.85 |
| EER90889 | Sorghum | nucleus | 35.85 | 35.85 |
| TraesCS3A01G405200.1 | Wheat | nucleus | 38.01 | 35.52 |
| CDX83217 | Canola | nucleus | 35.04 | 34.85 |
| TraesCS3B01G438900.1 | Wheat | nucleus | 37.74 | 32.33 |
| CDX78797 | Canola | nucleus | 36.93 | 31.86 |
| CDY60785 | Canola | nucleus | 36.93 | 31.35 |
| CDY38085 | Canola | nucleus | 33.96 | 28.7 |
| CDY13041 | Canola | nucleus | 23.72 | 28.66 |
| CDX85486 | Canola | nucleus | 33.96 | 28.51 |
| CDX93024 | Canola | nucleus | 23.45 | 28.43 |
| CDX77420 | Canola | nucleus | 23.99 | 28.34 |
| CDY50608 | Canola | nucleus | 23.99 | 28.25 |
| CDY09259 | Canola | nucleus | 27.49 | 28.18 |
| CDY39545 | Canola | nucleus | 23.72 | 28.03 |
| CDX76506 | Canola | nucleus | 27.49 | 27.87 |
| HORVU5Hr1G105770.2 | Barley | nucleus | 39.08 | 27.83 |
| CDY58547 | Canola | nucleus | 33.15 | 27.09 |
| CDY23108 | Canola | nucleus | 24.8 | 27.06 |
| CDY16977 | Canola | nucleus | 32.08 | 26.98 |
| CDY28731 | Canola | nucleus | 31.54 | 26.83 |
| CDY01288 | Canola | nucleus | 35.31 | 26.63 |
| CDX92026 | Canola | nucleus | 32.08 | 26.56 |
| CDX93842 | Canola | nucleus | 34.77 | 26.49 |
| CDX99415 | Canola | nucleus | 27.22 | 26.3 |
| CDX74228 | Canola | nucleus | 32.08 | 26.15 |
| CDY69818 | Canola | nucleus | 27.49 | 26.15 |
| CDY01562 | Canola | nucleus | 27.49 | 25.95 |
| CDX69418 | Canola | nucleus | 33.69 | 25.67 |
| CDX70290 | Canola | nucleus | 25.07 | 25.62 |
| CDY10361 | Canola | nucleus | 27.22 | 25.19 |
| Zm00001d034433_P003 | Maize | nucleus | 39.35 | 23.51 |
| CDY44649 | Canola | nucleus | 28.03 | 21.89 |
| CDY12723 | Canola | nucleus | 26.95 | 21.05 |
| CDY01180 | Canola | nucleus | 26.95 | 20.96 |
| CDX78902 | Canola | nucleus | 26.15 | 18.76 |
| CDY43157 | Canola | cytosol | 2.43 | 10.0 |
| CDX84097 | Canola | nucleus | 6.74 | 9.29 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | GO:A0A078I950 | UniProt:A0A078I950 | EnsemblPlants:CDY46607 | ProteinID:CDY46607 |
| ProteinID:CDY46607.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00085882001 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 |
| PANTHER:PTHR10015 | PANTHER:PTHR10015:SF139 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0004EEF3DC | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : | : |
Description
BnaCnng14290DBnaCnng14290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I950]
Coordinates
chrLK032678:+:152079..153948
Molecular Weight (calculated)
43134.7 Da
IEP (calculated)
5.681
GRAVY (calculated)
-0.887
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPPYRFIKE EFPTGFNDSP SPPSSNLYTT SMAPNDPTTT LSSPQPIEGL HESGPPPFLT KTYDLVEDSR TNHVVSWSQA NNSFIVWDQE YFSMTLLPIF
101: FKHNNLSSFV RQLNTYVSTN LNTYVKLSRF YYTLHPLGFR KVNPDRWEFA NEGFLRGQKH LLKTIRRRKT NNCCIEVGRR DKQVLMMELV KVRQQQQSTK
201: MDLTLLEDKL KKTESKQKQM MRFLARAMQN PDFLQQLIEQ KEKSKDTEEA IDKKRQRPID QGKRHDAGSS SAFFDMKQET YGDMSELDRL AMHIQGLGDQ
301: CNKKDVVLDV GKGNEEQQHK ERYQDENNEI YGEGFWEDLL NEGQNFDLQG DDEENVDVLI EQLGYLGSSG H
101: FKHNNLSSFV RQLNTYVSTN LNTYVKLSRF YYTLHPLGFR KVNPDRWEFA NEGFLRGQKH LLKTIRRRKT NNCCIEVGRR DKQVLMMELV KVRQQQQSTK
201: MDLTLLEDKL KKTESKQKQM MRFLARAMQN PDFLQQLIEQ KEKSKDTEEA IDKKRQRPID QGKRHDAGSS SAFFDMKQET YGDMSELDRL AMHIQGLGDQ
301: CNKKDVVLDV GKGNEEQQHK ERYQDENNEI YGEGFWEDLL NEGQNFDLQG DDEENVDVLI EQLGYLGSSG H
001: MDPSFRFIKE EFPAGFSDSP SPPSSSSYLY SSSMAEAAIN DPTTLSYPQP LEGLHESGPP PFLTKTYDLV EDSRTNHVVS WSKSNNSFIV WDPQAFSVTL
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN
Arabidopsis Description
HSFA6BHeat stress transcription factor A-6b [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.