Factsheet for TraesCS2A01G089300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G087400.1	Wheat	nucleus	97.09	97.33
TraesCS2B01G105100.1	Wheat	nucleus	91.04	92.84
HORVU2Hr1G014590.1	Barley	nucleus	92.49	91.39
TraesCS3A01G405200.1	Wheat	nucleus	71.67	74.56
Os07t0178600-01	Rice	nucleus	65.38	72.58
EER95940	Sorghum	nucleus	64.16	71.24
Zm00001d018941_P001	Maize	nucleus	64.41	70.93
TraesCS5A01G437900.1	Wheat	nucleus	52.3	62.43
Solyc06g053960.2.1	Tomato	nucleus	20.34	59.15
AT3G51910.1	Thale cress	nucleus	33.66	51.1
TraesCS1A01G375600.2	Wheat	nucleus	44.79	50.27
CDX95313	Canola	nucleus	32.2	49.63
TraesCS4A01G027700.1	Wheat	nucleus	40.68	49.27
KRG95588	Soybean	nucleus	43.34	48.38
KRH31657	Soybean	nucleus	39.47	48.37
KRG91367	Soybean	nucleus	42.86	48.36
VIT_00s0179g00150.t01	Wine grape	nucleus	42.13	48.2
Bra012829.1-P	Field mustard	nucleus	28.81	47.98
CDY29054	Canola	nucleus	30.02	46.79
CDX90626	Canola	nucleus	30.27	46.47
Bra012828.1-P	Field mustard	nucleus	30.27	46.47
KRH35452	Soybean	nucleus	41.16	46.45
KRH67266	Soybean	nucleus	43.34	46.37
Solyc09g082670.2.1	Tomato	nucleus	39.71	46.07
KRH32059	Soybean	nucleus	38.01	46.04
CDX94887	Canola	nucleus	29.54	45.19
VIT_05s0020g04090.t01	Wine grape	nucleus	38.26	44.89
TraesCS5A01G383800.1	Wheat	nucleus	40.19	44.62
PGSC0003DMT400049793	Potato	nucleus	39.23	44.51
PGSC0003DMT400016511	Potato	nucleus	38.98	44.48
CDX90627	Canola	nucleus	30.75	44.25
Solyc09g065660.2.1	Tomato	nucleus	39.71	44.09
CDY10674	Canola	nucleus	41.4	43.96
PGSC0003DMT400049795	Potato	nucleus	37.77	43.33
CDY34229	Canola	nucleus	39.71	43.27
PGSC0003DMT400041944	Potato	nucleus	35.35	42.44
CDY10311	Canola	nucleus	39.71	42.27
Bra033913.1-P	Field mustard	nucleus	41.65	42.26
CDY46606	Canola	nucleus	38.98	42.04
Bra023800.1-P	Field mustard	nucleus	39.95	41.46
CDY46607	Canola	nucleus	37.05	41.24
AT3G22830.1	Thale cress	nucleus	40.44	41.13
CDX94884	Canola	nucleus	28.57	41.12
CDY14893	Canola	nucleus	25.91	40.84
AT3G63350.1	Thale cress	nucleus	27.6	40.43
Bra001885.1-P	Field mustard	nucleus	38.26	40.41
AT5G43840.1	Thale cress	nucleus	27.36	40.07
Bra007739.1-P	Field mustard	nucleus	27.12	39.3
CDY11470	Canola	nucleus	27.12	39.3
Bra035993.1-P	Field mustard	nucleus	26.39	38.79
CDX76693	Canola	nucleus	26.63	38.6
CDX92958	Canola	nucleus	31.96	38.37
TraesCS7A01G355300.1	Wheat	nucleus	23.49	36.47
TraesCS3A01G280800.1	Wheat	nucleus	20.58	36.02
TraesCS5A01G550700.1	Wheat	nucleus	23.49	35.53
TraesCS5A01G548700.1	Wheat	nucleus	23.0	34.67
TraesCS5A01G524000.1	Wheat	nucleus	21.55	33.97
TraesCS7A01G360400.1	Wheat	nucleus	29.06	33.52
TraesCS3A01G393100.1	Wheat	nucleus	21.79	31.91
TraesCS3A01G393200.1	Wheat	nucleus	23.73	31.21
TraesCS4A01G062800.1	Wheat	nucleus	28.57	30.81
TraesCS3A01G229000.1	Wheat	nucleus	23.73	30.15
TraesCS4A01G322300.1	Wheat	nucleus	37.29	29.56
TraesCS6A01G098800.1	Wheat	nucleus	30.02	27.07
TraesCS2A01G204500.1	Wheat	nucleus	31.72	26.25
TraesCS1A01G350400.2	Wheat	nucleus	26.88	25.06
TraesCS3A01G289200.1	Wheat	nucleus	25.42	24.31

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388	PFAM:PF00447	PRINTS:PR00056
ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF139	SMART:SM00415	SUPFAM:SSF46785	EnsemblPlantsGene:TraesCS2A01G089300
EnsemblPlants:TraesCS2A01G089300.1	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	:	:	:

Description

No Description!

Coordinates

chr2A:+:42470945..42476145

Molecular Weight (calculated)

45603.8 Da

IEP (calculated)

4.749

GRAVY (calculated)

-0.527

Length

413 amino acids

Sequence
(BLAST)

001: MDPVPGLVKE EEEEGAHGRG DSPAVGAAPR PMEGLHDAGP PPFLTKTYDM VDDPNTDSIM SWSAGNNSFV VWDPHAFATV LLPRHFKHSN FSSFVRQLNT
101: YGFRKVDPDR WEFANEGFLR GQRHLLKNIR RRKPPAHTAS NQQSLGSYLE VGHFGYDAEI DRLKRDKQLL MAEVVKLRQE QQNTKARLKA MEDRLRGTEQ
201: KQQQMTSFMA RILRNPEFLK QLIAKNGMRK ELHDAISKKR RRRIDGGPEA YAVGASSSSL EQELPVVFDS HGSVELLAEG SVPVELLADG IPPDLEGSVE
301: LLADEIPPGL EGSVALLADG LEGSVELLVD GIPSDLDGSG IDSNGVTEPQ DYGLGTCEAQ QNRALGLFHD NFWEELLNKG LSVENDEPVN VDGMDVLSEK
401: MGYLIPNSPT LST

Best Arabidopsis Sequence Match ( AT2G26150.4 )
(BLAST)

001: MEELKVEMEE ETVTFTGSVA ASSSVGSSSS PRPMEGLNET GPPPFLTKTY EMVEDPATDT VVSWSNGRNS FVVWDSHKFS TTLLPRYFKH SNFSSFIRQL
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP

Arabidopsis Description

HSFA2Heat stress transcription factor A-2 [Source:UniProtKB/Swiss-Prot;Acc:O80982]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.