Factsheet for TraesCS5A01G437900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G440700.1	Wheat	nucleus	95.09	93.2
TraesCS5D01G445100.1	Wheat	nucleus	93.64	93.1
EER93298	Sorghum	nucleus	74.86	76.4
HORVU5Hr1G105770.2	Barley	nucleus	94.22	62.57
Solyc06g053960.2.1	Tomato	nucleus	22.54	54.93
TraesCS2A01G089300.1	Wheat	nucleus	62.43	52.3
TraesCS3A01G405200.1	Wheat	nucleus	58.96	51.39
TraesCS4A01G027700.1	Wheat	nucleus	47.69	48.39
AT3G51910.1	Thale cress	nucleus	37.57	47.79
CDX95313	Canola	nucleus	36.42	47.01
VIT_00s0179g00150.t01	Wine grape	nucleus	48.84	46.81
Bra012829.1-P	Field mustard	nucleus	33.53	46.77
KRH32059	Soybean	nucleus	45.95	46.63
KRH31657	Soybean	nucleus	45.38	46.59
KRG95588	Soybean	nucleus	48.84	45.68
TraesCS1A01G375600.2	Wheat	nucleus	47.98	45.11
KRG91367	Soybean	nucleus	47.11	44.54
KRH67266	Soybean	nucleus	49.42	44.3
PGSC0003DMT400049793	Potato	nucleus	46.24	43.96
VIT_05s0020g04090.t01	Wine grape	nucleus	44.51	43.75
CDX90626	Canola	nucleus	33.81	43.49
Bra012828.1-P	Field mustard	nucleus	33.81	43.49
CDY29054	Canola	nucleus	33.24	43.4
KRH35452	Soybean	nucleus	45.66	43.17
Solyc09g065660.2.1	Tomato	nucleus	46.24	43.01
PGSC0003DMT400049795	Potato	nucleus	44.22	42.5
Solyc09g082670.2.1	Tomato	nucleus	43.64	42.42
Zm00001d034433_P003	Maize	nucleus	76.01	42.35
CDX90627	Canola	nucleus	34.97	42.16
PGSC0003DMT400016511	Potato	nucleus	43.64	41.71
TraesCS5A01G383800.1	Wheat	nucleus	44.8	41.67
PGSC0003DMT400041944	Potato	nucleus	41.33	41.57
CDY14893	Canola	nucleus	30.64	40.46
AT5G43840.1	Thale cress	nucleus	32.95	40.43
Bra035993.1-P	Field mustard	nucleus	32.37	39.86
CDY34229	Canola	nucleus	43.64	39.84
Bra007739.1-P	Field mustard	nucleus	32.66	39.65
CDY11470	Canola	nucleus	32.66	39.65
CDY10674	Canola	nucleus	43.93	39.07
AT3G63350.1	Thale cress	nucleus	31.5	38.65
CDY46606	Canola	nucleus	42.77	38.64
CDX76693	Canola	nucleus	31.79	38.6
Bra023800.1-P	Field mustard	nucleus	43.93	38.19
AT3G22830.1	Thale cress	nucleus	44.8	38.18
CDX94887	Canola	nucleus	29.77	38.15
CDY46607	Canola	nucleus	40.75	38.01
CDY10311	Canola	nucleus	42.49	37.89
TraesCS5A01G550700.1	Wheat	nucleus	29.77	37.73
TraesCS7A01G355300.1	Wheat	nucleus	28.9	37.59
Bra033913.1-P	Field mustard	nucleus	44.22	37.59
TraesCS3A01G280800.1	Wheat	nucleus	25.43	37.29
TraesCS5A01G548700.1	Wheat	nucleus	28.61	36.13
Bra001885.1-P	Field mustard	nucleus	40.75	36.06
CDX94884	Canola	nucleus	28.9	34.84
TraesCS3A01G393100.1	Wheat	nucleus	27.17	33.33
TraesCS7A01G360400.1	Wheat	nucleus	34.1	32.96
CDX92958	Canola	nucleus	32.66	32.85
TraesCS5A01G524000.1	Wheat	nucleus	24.86	32.82
TraesCS3A01G393200.1	Wheat	nucleus	29.77	32.8
TraesCS3A01G229000.1	Wheat	nucleus	29.48	31.38
TraesCS4A01G062800.1	Wheat	nucleus	34.39	31.07
TraesCS4A01G322300.1	Wheat	nucleus	43.64	28.98
TraesCS6A01G098800.1	Wheat	nucleus	34.97	26.42
TraesCS3A01G289200.1	Wheat	nucleus	29.48	23.61
TraesCS1A01G350400.2	Wheat	nucleus	30.06	23.48
TraesCS2A01G204500.1	Wheat	nucleus	33.53	23.25

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388	PFAM:PF00447	PRINTS:PR00056
ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF139	SMART:SM00415	SUPFAM:SSF46785	EnsemblPlantsGene:TraesCS5A01G437900
EnsemblPlants:TraesCS5A01G437900.1	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chr5A:+:619689655..619692635

Molecular Weight (calculated)

38986.9 Da

IEP (calculated)

5.446

GRAVY (calculated)

-0.698

Length

346 amino acids

Sequence
(BLAST)

001: MSHRMMMNPV KVEGDGRAGG GGAPRPMDGL GDAGPTPFLA KTYDMVDDPA TDAVVSWSAT NNSFVVWDPH LFATVLLPRY FKHGNFSSFV RQLNTYGFRK
101: VDPDRWEFAN EGFLRGQRHL LRNIKRRKPT HGSQNQQSLG SYLEVGNFGH DVEIDHLKRD RQLLMAEVVK LRQEQQNTRS DLQAMEKRLQ GTEQKQQQMM
201: SFLARVMQNP MFIHHLLSQS EMRKELEDAI SNKRRRRIDQ GPEAVDSMGT GSTLEQGSQV MFEQQEPVDS LVNGVISDLE SSSVDTKGAE VQQSVASSRS
301: EQLRGRPSGE LNDDFWEDLL HEGGLGEEAS NLVVPDDMNL LAEKLD

Best Arabidopsis Sequence Match ( AT4G17750.1 )
(BLAST)

001: MFVNFKYFSF FIRTKMDGVT GGGTNIGEAV TAPPPRNPHP ATLLNANSLP PPFLSKTYDM VEDPATDAIV SWSPTNNSFI VWDPPEFSRD LLPKYFKHNN
101: FSSFVRQLNT YGFRKVDPDR WEFANEGFLR GQKHLLKKIS RRKSVQGHGS SSSNPQSQQL SQGQGSMAAL SSCVEVGKFG LEEEVEQLKR DKNVLMQELV
201: KLRQQQQTTD NKLQVLVKHL QVMEQRQQQI MSFLAKAVQN PTFLSQFIQK QTDSNMHVTE ANKKRRLRED STAATESNSH SHSLEASDGQ IVKYQPLRND
301: SMMWNMMKTD DKYPFLDGFS SPNQVSGVTL QEVLPITSGQ SQAYASVPSG QPLSYLPSTS TSLPDTIMPE TSQIPQLTRE SINDFPTENF MDTEKNVPEA
401: FISPSPFLDG GSVPIQLEGI PEDPEIDELM SNFEFLEEYM PESPVFGDAT TLENNNNNNN NNNNNNNNNN NNNTNGRHMD KLIEELGLLT SETEH

Arabidopsis Description

HSFA1AHeat stress transcription factor A-1a [Source:UniProtKB/Swiss-Prot;Acc:P41151]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.