Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11470 | Canola | nucleus | 79.08 | 78.25 |
| Bra007739.1-P | Field mustard | nucleus | 79.08 | 78.25 |
| CDX76693 | Canola | nucleus | 78.72 | 77.89 |
| AT3G51910.1 | Thale cress | nucleus | 58.16 | 60.29 |
| VIT_00s0179g00150.t01 | Wine grape | nucleus | 50.0 | 39.06 |
| PGSC0003DMT400049795 | Potato | nucleus | 49.65 | 38.89 |
| Solyc09g065660.2.1 | Tomato | nucleus | 51.06 | 38.71 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 39.72 | 38.62 |
| PGSC0003DMT400049793 | Potato | nucleus | 49.65 | 38.46 |
| KRG95588 | Soybean | nucleus | 50.0 | 38.11 |
| KRH32059 | Soybean | nucleus | 45.39 | 37.54 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 40.78 | 37.34 |
| KRH67266 | Soybean | nucleus | 50.0 | 36.53 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 43.62 | 36.07 |
| TraesCS4B01G278100.1 | Wheat | nucleus | 43.62 | 36.07 |
| TraesCS4D01G276500.1 | Wheat | nucleus | 43.62 | 36.07 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 43.97 | 36.05 |
| AT5G43840.1 | Thale cress | nucleus | 35.11 | 35.11 |
| Os10t0419300-00 | Rice | nucleus | 43.97 | 34.64 |
| EER94213 | Sorghum | nucleus | 43.62 | 33.98 |
| Zm00001d027757_P001 | Maize | nucleus | 46.1 | 33.85 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 39.72 | 33.63 |
| Zm00001d032923_P002 | Maize | nucleus | 42.55 | 33.61 |
| EER95463 | Sorghum | nucleus | 45.74 | 32.99 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 39.01 | 32.93 |
| Os03t0161900-02 | Rice | nucleus | 43.26 | 32.19 |
| HORVU1Hr1G083420.2 | Barley | nucleus | 42.2 | 31.99 |
| AT2G26150.1 | Thale cress | nucleus | 38.65 | 31.59 |
| TraesCS1B01G396000.1 | Wheat | nucleus | 40.07 | 31.56 |
| TraesCS5A01G437900.1 | Wheat | nucleus | 38.65 | 31.5 |
| TraesCS1D01G382900.1 | Wheat | nucleus | 40.43 | 31.32 |
| EER93298 | Sorghum | nucleus | 37.59 | 31.27 |
| Zm00001d033987_P001 | Maize | nucleus | 41.13 | 31.27 |
| TraesCS5B01G440700.1 | Wheat | nucleus | 39.01 | 31.16 |
| TraesCS5D01G445100.1 | Wheat | nucleus | 38.3 | 31.03 |
| TraesCS1A01G375600.2 | Wheat | nucleus | 40.43 | 30.98 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 40.07 | 30.46 |
| EER90889 | Sorghum | nucleus | 40.07 | 30.46 |
| AT3G22830.1 | Thale cress | nucleus | 43.62 | 30.3 |
| Os07t0178600-01 | Rice | nucleus | 39.72 | 30.11 |
| EER95940 | Sorghum | nucleus | 39.01 | 29.57 |
| Zm00001d018941_P001 | Maize | nucleus | 39.01 | 29.33 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 38.65 | 29.3 |
| TraesCS5D01G393200.1 | Wheat | nucleus | 39.01 | 29.18 |
| TraesCS2B01G105100.1 | Wheat | nucleus | 41.13 | 28.64 |
| TraesCS2D01G087400.1 | Wheat | nucleus | 41.13 | 28.16 |
| TraesCS3A01G405200.1 | Wheat | nucleus | 39.36 | 27.96 |
| HORVU2Hr1G014590.1 | Barley | nucleus | 41.13 | 27.75 |
| TraesCS2A01G089300.1 | Wheat | nucleus | 40.43 | 27.6 |
| TraesCS3B01G438900.1 | Wheat | nucleus | 37.23 | 24.25 |
| AT3G24520.1 | Thale cress | nucleus | 28.37 | 24.24 |
| AT5G45710.3 | Thale cress | nucleus | 28.01 | 22.9 |
| AT5G54070.1 | Thale cress | nucleus | 26.24 | 22.36 |
| AT4G18880.1 | Thale cress | nucleus | 30.85 | 21.7 |
| HORVU5Hr1G105770.2 | Barley | nucleus | 40.07 | 21.69 |
| AT5G03720.1 | Thale cress | nucleus | 31.56 | 21.6 |
| AT3G02990.1 | Thale cress | nucleus | 35.82 | 21.58 |
| AT1G32330.1 | Thale cress | nucleus | 36.17 | 21.03 |
| AT4G17750.1 | Thale cress | nucleus | 36.17 | 20.61 |
| AT5G16820.2 | Thale cress | nucleus | 34.75 | 20.37 |
| AT4G13980.1 | Thale cress | nucleus | 30.5 | 18.45 |
| Zm00001d034433_P003 | Maize | nucleus | 38.3 | 17.39 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | EntrezGene:825510 | ProteinID:AEE80470.1 | Symbol:AT-HSFA7B | ArrayExpress:AT3G63350 |
| EnsemblPlantsGene:AT3G63350 | RefSeq:AT3G63350 | TAIR:AT3G63350 | RefSeq:AT3G63350-TAIR-G | EnsemblPlants:AT3G63350.1 | TAIR:AT3G63350.1 |
| ProteinID:CAB86436.1 | ncoils:Coil | EMBL:DQ446784 | EMBL:DQ653166 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009408 | GO:GO:0009628 | GO:GO:0009644 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0043565 | InterPro:HSF_DNA-bd | InterPro:HSF_fam |
| InterPro:IPR036388 | RefSeq:NP_191894.1 | PFAM:PF00447 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009030 | PO:PO:0009052 | PRINTS:PR00056 | ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF260 |
| UniProt:Q9M1V5 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI00000A06CE | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf |
| SEG:seg | : | : | : | : | : |
Description
HSFA7BHeat stress transcription factor A-7b [Source:UniProtKB/Swiss-Prot;Acc:Q9M1V5]
Coordinates
chr3:+:23399236..23400812
Molecular Weight (calculated)
32625.5 Da
IEP (calculated)
4.869
GRAVY (calculated)
-0.790
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPSSSSRAR SMPPPVPMEG LQEAGPSPFL TKTFEMVGDP NTNHIVSWNR GGISFVVWDP HSFSATILPL YFKHNNFSSF VRQLNTYGFR KIEAERWEFM
101: NEGFLMGQRD LLKSIKRRTS SSSPPSLNYS QSQPEAHDPG VELPQLREER HVLMMEISTL RQEEQRARGY VQAMEQRING AEKKQRHMMS FLRRAVENPS
201: LLQQIFEQKR DREEAAMIDQ AGLIKMEEVE HLSELEALAL EMQGYGRQRT DGVERELDDG FWEELLMNNE NSDEEEANVK QD
101: NEGFLMGQRD LLKSIKRRTS SSSPPSLNYS QSQPEAHDPG VELPQLREER HVLMMEISTL RQEEQRARGY VQAMEQRING AEKKQRHMMS FLRRAVENPS
201: LLQQIFEQKR DREEAAMIDQ AGLIKMEEVE HLSELEALAL EMQGYGRQRT DGVERELDDG FWEELLMNNE NSDEEEANVK QD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.