Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12723 | Canola | nucleus | 86.91 | 85.26 |
| CDY01180 | Canola | nucleus | 86.91 | 84.91 |
| Bra032752.1-P | Field mustard | nucleus | 86.91 | 84.91 |
| KRH58845 | Soybean | nucleus | 57.73 | 56.16 |
| KRH42748 | Soybean | nucleus | 57.3 | 55.97 |
| Solyc12g098520.1.1 | Tomato | nucleus | 54.08 | 52.72 |
| PGSC0003DMT400011871 | Potato | nucleus | 53.86 | 52.51 |
| VIT_05s0029g00350.t01 | Wine grape | mitochondrion, nucleus | 46.57 | 49.32 |
| GSMUA_Achr6P27750_001 | Banana | nucleus | 41.42 | 49.11 |
| GSMUA_Achr9P01640_001 | Banana | nucleus | 40.13 | 49.08 |
| Os02t0496100-01 | Rice | nucleus | 47.0 | 46.11 |
| GSMUA_Achr8P28330_001 | Banana | nucleus | 31.33 | 44.65 |
| EES05094 | Sorghum | nucleus | 46.35 | 44.54 |
| TraesCS6B01G127000.1 | Wheat | nucleus | 42.92 | 43.96 |
| HORVU6Hr1G017910.1 | Barley | nucleus | 42.92 | 43.76 |
| TraesCS6D01G083800.1 | Wheat | nucleus | 42.92 | 43.67 |
| TraesCS6A01G098800.1 | Wheat | nucleus | 42.7 | 43.45 |
| Zm00001d016520_P001 | Maize | nucleus | 45.92 | 40.53 |
| AT5G45710.3 | Thale cress | nucleus | 26.82 | 36.23 |
| AT3G51910.1 | Thale cress | nucleus | 19.96 | 34.19 |
| AT4G18880.1 | Thale cress | nucleus | 28.11 | 32.67 |
| AT5G43840.1 | Thale cress | nucleus | 19.53 | 32.27 |
| AT3G63350.1 | Thale cress | nucleus | 18.45 | 30.5 |
| AT2G26150.1 | Thale cress | nucleus | 21.89 | 29.57 |
| AT3G22830.1 | Thale cress | nucleus | 23.39 | 26.85 |
| AT5G54070.1 | Thale cress | nucleus | 18.45 | 25.98 |
| AT1G32330.1 | Thale cress | nucleus | 26.61 | 25.57 |
| AT4G17750.1 | Thale cress | nucleus | 26.61 | 25.05 |
| AT3G24520.1 | Thale cress | nucleus | 17.6 | 24.85 |
| AT3G02990.1 | Thale cress | nucleus | 24.68 | 24.57 |
| AT5G16820.2 | Thale cress | nucleus | 25.32 | 24.53 |
| AT5G03720.1 | Thale cress | nucleus | 18.03 | 20.39 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | EntrezGene:827033 | ProteinID:AEE83355.1 | EMBL:AK221877 | Symbol:AT-HSFA5 |
| ArrayExpress:AT4G13980 | EnsemblPlantsGene:AT4G13980 | RefSeq:AT4G13980 | TAIR:AT4G13980 | RefSeq:AT4G13980-TAIR-G | EnsemblPlants:AT4G13980.1 |
| TAIR:AT4G13980.1 | EMBL:AY039528 | Unigene:At.4244 | EMBL:BT001056 | ProteinID:CAB10177.1 | ProteinID:CAB78440.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | RefSeq:NP_567415.1 | PFAM:PF00447 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00056 | ScanProsite:PS00434 |
| PANTHER:PTHR10015 | PANTHER:PTHR10015:SF157 | UniProt:Q94BZ5 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI00000AC1AC |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : |
Description
HSFA5Heat stress transcription factor A-5 [Source:UniProtKB/Swiss-Prot;Acc:Q94BZ5]
Coordinates
chr4:-:8076903..8079408
Molecular Weight (calculated)
52357.9 Da
IEP (calculated)
6.586
GRAVY (calculated)
-0.835
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGALGNSSA SVSGGEGAGG PAPFLVKTYE MVDDSSTDQI VSWSANNNSF IVWNHAEFSR LLLPTYFKHN NFSSFIRQLN TYGFRKIDPE RWEFLNDDFI
101: KDQKHLLKNI HRRKPIHSHS HPPASSTDQE RAVLQEQMDK LSREKAAIEA KLLKFKQQKV VAKHQFEEMT EHVDDMENRQ KKLLNFLETA IRNPTFVKNF
201: GKKVEQLDIS AYNKKRRLPE VEQSKPPSED SHLDNSSGSS RRESGNIFHQ NFSNKLRLEL SPADSDMNMV SHSIQSSNEE GASPKGILSG GDPNTTLTKR
301: EGLPFAPEAL ELADTGTCPR RLLLNDNTRV ETLQQRLTSS EETDGSFSCH LNLTLASAPL PDKTASQIAK TTLKSQELNF NSIETSASEK NRGRQEIAVG
401: GSQANAAPPA RVNDVFWEQF LTERPGSSDN EEASSTYRGN PYEEQEEKRN GSMMLRNTKN IEQLTL
101: KDQKHLLKNI HRRKPIHSHS HPPASSTDQE RAVLQEQMDK LSREKAAIEA KLLKFKQQKV VAKHQFEEMT EHVDDMENRQ KKLLNFLETA IRNPTFVKNF
201: GKKVEQLDIS AYNKKRRLPE VEQSKPPSED SHLDNSSGSS RRESGNIFHQ NFSNKLRLEL SPADSDMNMV SHSIQSSNEE GASPKGILSG GDPNTTLTKR
301: EGLPFAPEAL ELADTGTCPR RLLLNDNTRV ETLQQRLTSS EETDGSFSCH LNLTLASAPL PDKTASQIAK TTLKSQELNF NSIETSASEK NRGRQEIAVG
401: GSQANAAPPA RVNDVFWEQF LTERPGSSDN EEASSTYRGN PYEEQEEKRN GSMMLRNTKN IEQLTL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.