Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G083800.1 | Wheat | nucleus | 95.82 | 95.2 |
| TraesCS6A01G098800.1 | Wheat | nucleus | 94.29 | 93.67 |
| HORVU6Hr1G017910.1 | Barley | nucleus | 92.53 | 92.12 |
| Os02t0496100-01 | Rice | nucleus | 76.92 | 73.68 |
| EES05094 | Sorghum | nucleus | 71.65 | 67.22 |
| Zm00001d016520_P001 | Maize | nucleus | 70.77 | 60.98 |
| GSMUA_Achr9P01640_001 | Banana | nucleus | 46.59 | 55.64 |
| GSMUA_Achr6P27750_001 | Banana | nucleus | 47.47 | 54.96 |
| GSMUA_Achr8P28330_001 | Banana | nucleus | 36.04 | 50.15 |
| PGSC0003DMT400011871 | Potato | nucleus | 46.37 | 44.14 |
| Solyc12g098520.1.1 | Tomato | nucleus | 46.15 | 43.93 |
| AT4G13980.1 | Thale cress | nucleus | 43.96 | 42.92 |
| KRH58845 | Soybean | nucleus | 45.05 | 42.8 |
| KRH42748 | Soybean | nucleus | 44.18 | 42.14 |
| CDY01180 | Canola | nucleus | 42.42 | 40.46 |
| CDY12723 | Canola | nucleus | 42.2 | 40.42 |
| Bra032752.1-P | Field mustard | nucleus | 42.2 | 40.25 |
| VIT_05s0029g00350.t01 | Wine grape | mitochondrion, nucleus | 36.26 | 37.5 |
| TraesCS1B01G396000.1 | Wheat | nucleus | 27.47 | 34.92 |
| TraesCS3B01G314600.1 | Wheat | nucleus | 17.36 | 34.8 |
| TraesCS4B01G383200.1 | Wheat | nucleus | 17.58 | 34.63 |
| TraesCS5B01G440700.1 | Wheat | nucleus | 26.59 | 34.28 |
| TraesCS4B01G383400.1 | Wheat | nucleus | 19.56 | 33.21 |
| TraesCS4B01G385800.1 | Wheat | nucleus | 19.78 | 32.97 |
| TraesCS4B01G383300.1 | Wheat | nucleus | 19.78 | 32.73 |
| TraesCS3B01G568200.1 | Wheat | nucleus | 16.26 | 32.31 |
| TraesCS4B01G278100.1 | Wheat | nucleus | 24.18 | 32.26 |
| TraesCS7B01G272500.1 | Wheat | nucleus | 18.46 | 31.94 |
| TraesCS3B01G568300.1 | Wheat | nucleus | 19.12 | 31.75 |
| TraesCS3B01G323800.1 | Wheat | nucleus | 29.23 | 30.16 |
| TraesCS2B01G105100.1 | Wheat | nucleus | 26.81 | 30.12 |
| TraesCS7B01G267300.1 | Wheat | nucleus | 22.64 | 29.18 |
| TraesCS3B01G255600.1 | Wheat | nucleus | 19.34 | 27.08 |
| TraesCS3B01G425200.1 | Wheat | nucleus | 18.02 | 26.97 |
| TraesCS5B01G556200.1 | Wheat | nucleus | 30.33 | 26.09 |
| TraesCS4B01G239700.1 | Wheat | nucleus | 21.76 | 25.78 |
| TraesCS3B01G438900.1 | Wheat | nucleus | 24.18 | 25.4 |
| TraesCS2B01G232000.2 | Wheat | nucleus | 22.86 | 21.89 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 |
| ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF157 | SMART:SM00415 | SUPFAM:SSF46785 | EnsemblPlantsGene:TraesCS6B01G127000 |
| EnsemblPlants:TraesCS6B01G127000.1 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chr6B:-:122679756..122682792
Molecular Weight (calculated)
49925.0 Da
IEP (calculated)
5.241
GRAVY (calculated)
-0.689
Length
455 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSGTAGAR GGGGGGPAPF LLKTYEMVDD PSTDAVVSWS DASDTSFVVW NSPEFAARLL PAYFKHSNFS SFIRQLNTYG FRKIDPERWE FGNEYFVKGQ
101: KHLLKNIYRR KPIHSHSHQP GALPDNERSF FEDEIDRLAR EKANLQAELW KSKQQESGTM FQIEALERRA VDMEQRQGKM IAFLQQASKN PHFVGKLVKM
201: AEASSMFADA LHKKRRLSGL DYAVEATETA SFCDDHSPTS RQETGNLLNQ HFSDKLKLGL CSAAAESNLV TLSTQSSHED NCSPHGRHPP GHEGMGTGRL
301: PLVPQMMELS DTGTSICPSK SSFFTPAVND EGLSPCHLSL TLASCSMDVD RGQASNADGS TTVDEGSDNP PEATTAAMGV NQKASVDAGT AEALRPREDM
401: RVATEPAAPV KANDNFWEQF LTERPGDASS GPRDPSMDKE QTERGEKDDT EQLKL
101: KHLLKNIYRR KPIHSHSHQP GALPDNERSF FEDEIDRLAR EKANLQAELW KSKQQESGTM FQIEALERRA VDMEQRQGKM IAFLQQASKN PHFVGKLVKM
201: AEASSMFADA LHKKRRLSGL DYAVEATETA SFCDDHSPTS RQETGNLLNQ HFSDKLKLGL CSAAAESNLV TLSTQSSHED NCSPHGRHPP GHEGMGTGRL
301: PLVPQMMELS DTGTSICPSK SSFFTPAVND EGLSPCHLSL TLASCSMDVD RGQASNADGS TTVDEGSDNP PEATTAAMGV NQKASVDAGT AEALRPREDM
401: RVATEPAAPV KANDNFWEQF LTERPGDASS GPRDPSMDKE QTERGEKDDT EQLKL
001: MNGALGNSSA SVSGGEGAGG PAPFLVKTYE MVDDSSTDQI VSWSANNNSF IVWNHAEFSR LLLPTYFKHN NFSSFIRQLN TYGFRKIDPE RWEFLNDDFI
101: KDQKHLLKNI HRRKPIHSHS HPPASSTDQE RAVLQEQMDK LSREKAAIEA KLLKFKQQKV VAKHQFEEMT EHVDDMENRQ KKLLNFLETA IRNPTFVKNF
201: GKKVEQLDIS AYNKKRRLPE VEQSKPPSED SHLDNSSGSS RRESGNIFHQ NFSNKLRLEL SPADSDMNMV SHSIQSSNEE GASPKGILSG GDPNTTLTKR
301: EGLPFAPEAL ELADTGTCPR RLLLNDNTRV ETLQQRLTSS EETDGSFSCH LNLTLASAPL PDKTASQIAK TTLKSQELNF NSIETSASEK NRGRQEIAVG
401: GSQANAAPPA RVNDVFWEQF LTERPGSSDN EEASSTYRGN PYEEQEEKRN GSMMLRNTKN IEQLTL
101: KDQKHLLKNI HRRKPIHSHS HPPASSTDQE RAVLQEQMDK LSREKAAIEA KLLKFKQQKV VAKHQFEEMT EHVDDMENRQ KKLLNFLETA IRNPTFVKNF
201: GKKVEQLDIS AYNKKRRLPE VEQSKPPSED SHLDNSSGSS RRESGNIFHQ NFSNKLRLEL SPADSDMNMV SHSIQSSNEE GASPKGILSG GDPNTTLTKR
301: EGLPFAPEAL ELADTGTCPR RLLLNDNTRV ETLQQRLTSS EETDGSFSCH LNLTLASAPL PDKTASQIAK TTLKSQELNF NSIETSASEK NRGRQEIAVG
401: GSQANAAPPA RVNDVFWEQF LTERPGSSDN EEASSTYRGN PYEEQEEKRN GSMMLRNTKN IEQLTL
Arabidopsis Description
HSFA5Heat stress transcription factor A-5 [Source:UniProtKB/Swiss-Prot;Acc:Q94BZ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.