Factsheet for Os02t0496100-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G017910.1	Barley	nucleus	74.11	77.02
TraesCS6B01G127000.1	Wheat	nucleus	73.68	76.92
TraesCS6D01G083800.1	Wheat	nucleus	73.68	76.42
TraesCS6A01G098800.1	Wheat	nucleus	73.68	76.42
EES05094	Sorghum	nucleus	73.26	71.75
Zm00001d016520_P001	Maize	nucleus	71.37	64.2
GSMUA_Achr9P01640_001	Banana	nucleus	46.74	58.27
GSMUA_Achr6P27750_001	Banana	nucleus	46.95	56.74
GSMUA_Achr8P28330_001	Banana	nucleus	34.53	50.15
PGSC0003DMT400011871	Potato	nucleus	48.84	48.54
Solyc12g098520.1.1	Tomato	nucleus	48.63	48.33
AT4G13980.1	Thale cress	nucleus	46.11	47.0
KRH58845	Soybean	nucleus	46.11	45.72
KRH42748	Soybean	nucleus	45.47	45.28
CDY12723	Canola	nucleus	44.84	44.84
Bra032752.1-P	Field mustard	nucleus	44.84	44.65
CDY01180	Canola	nucleus	44.84	44.65
VIT_05s0029g00350.t01	Wine grape	mitochondrion, nucleus	38.95	42.05
Os01t0749300-02	Rice	nucleus	31.79	34.32
Os10t0419300-00	Rice	nucleus	25.68	34.08
Os07t0178600-01	Rice	nucleus	26.32	33.6
Os01t0733200-01	Rice	nucleus	17.05	32.4
Os06t0565200-00	Rice	nucleus	22.53	32.33
Os05t0530400-01	Rice	nucleus	31.16	32.24
Os03t0161900-02	Rice	nucleus	24.0	30.08
Os02t0232000-01	Rice	nucleus	18.74	29.87
Os03t0854500-01	Rice	nucleus	31.37	29.45
Os01t0571300-01	Rice	mitochondrion, nucleus	22.95	27.11
Os01t0625300-01	Rice	nucleus	19.16	26.84
Os03t0224700-01	Rice	nucleus	21.89	25.37
Os02t0527300-01	Rice	nucleus	22.53	21.49

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	EntrezGene:4329405	EMBL:AK065643	ProteinID:BAD23142.1	ProteinID:BAF08803.1
ProteinID:BAS78768.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388	EnsemblPlantsGene:Os02g0496100
EnsemblPlants:Os02t0496100-01	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF157
UniProt:Q6K6S5	SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI00003B0553	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf
RefSeq:XP_015622576.1	SEG:seg	:	:	:	:

Description

HEAT STRESS TRANSCRIPTION FACTOR A5Heat shock factor (HSF)-type, DNA-binding domain containing protein. (Os02t0496100-01)

Coordinates

chr2:+:17428031..17431216

Molecular Weight (calculated)

52887.4 Da

IEP (calculated)

5.174

GRAVY (calculated)

-0.739

Length

475 amino acids

Sequence
(BLAST)

001: MEVAAGARGG GAGGGGGGPA PFLLKTYEMV DDPSTDAVVS WSDASDASFV VWNHPEFAAR LLPAYFKHSN FSSFIRQLNT YGFRKIDPER WEFANEYFIK
101: GQKHLLKNIH RRKPIHSHSH PPGALPDNER AIFEDEIERL SREKSNLQAD LWKSKQQQSG TMNQIEDLER RVLGMEQRQT KMIAFLQQAS KNPQFVNKLV
201: KMAEASSIFT DAFNKKRRLP GLDYSIENTE TTSFYDDHSS TSKQETGNLL NQHFSDKLRL GLCPAMTESN IITLSTQSSN EDNRSPHGKH PECDMMGREC
301: LPLVPQMMEL SDTGTSICPS KSSCFAPPIS DEGLLTCHLS LTLASCSMDV DKSQGLNANG TTIDNPTEAA TATMEKDDTI DRSFDDNQKK SADSRTADAT
401: TPRADARVAS EAPAAPAAVV NDKFWEQFLT ERPGCSETEE ASSGLRTDTS REQMENRQAY DHSRNDREDV EQLKL

Best Arabidopsis Sequence Match ( AT4G13980.1 )
(BLAST)

001: MNGALGNSSA SVSGGEGAGG PAPFLVKTYE MVDDSSTDQI VSWSANNNSF IVWNHAEFSR LLLPTYFKHN NFSSFIRQLN TYGFRKIDPE RWEFLNDDFI
101: KDQKHLLKNI HRRKPIHSHS HPPASSTDQE RAVLQEQMDK LSREKAAIEA KLLKFKQQKV VAKHQFEEMT EHVDDMENRQ KKLLNFLETA IRNPTFVKNF
201: GKKVEQLDIS AYNKKRRLPE VEQSKPPSED SHLDNSSGSS RRESGNIFHQ NFSNKLRLEL SPADSDMNMV SHSIQSSNEE GASPKGILSG GDPNTTLTKR
301: EGLPFAPEAL ELADTGTCPR RLLLNDNTRV ETLQQRLTSS EETDGSFSCH LNLTLASAPL PDKTASQIAK TTLKSQELNF NSIETSASEK NRGRQEIAVG
401: GSQANAAPPA RVNDVFWEQF LTERPGSSDN EEASSTYRGN PYEEQEEKRN GSMMLRNTKN IEQLTL

Arabidopsis Description

HSFA5Heat stress transcription factor A-5 [Source:UniProtKB/Swiss-Prot;Acc:Q94BZ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.