Factsheet for Os03t0854500-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
nucleus 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0840100-01
Os03t0276500-01
Os03t0366200-01
Os03t0657000-01
Os05t0460000-01
Os07t0619800-02
Os07t0641200-01
Os12t0580300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G17750.1	Os03t0657000-01	AT1G55520.1	9801140
AT4G17750.1	Os12t0580300-01	AT1G55520.1	9801140
AT4G17750.1	Os03t0366200-01	AT2G41140.1	18466301
AT4G17750.1	Os07t0641200-01	AT2G41140.1	18466301
AT4G17750.1	Os01t0840100-01	AT3G12580.1	11807141
AT4G17750.1	Os03t0276500-01	AT3G12580.1	11807141
AT4G17750.1	Os05t0460000-01	AT3G12580.1	11807141
AT4G17750.1	Os03t0657000-01	AT3G13445.1	9801140
AT4G17750.1	Os12t0580300-01	AT3G13445.1	9801140
AT4G17750.1	Os07t0619800-02	AT3G19100.1	18466301

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93074	Sorghum	nucleus	82.21	78.94
TraesCS4A01G322300.1	Wheat	nucleus	78.85	76.58
TraesCS5D01G553300.1	Wheat	nucleus	78.66	76.25
TraesCS5B01G556200.1	Wheat	nucleus	78.66	75.24
Zm00001d034886_P001	Maize	nucleus	78.06	74.95
HORVU5Hr1G123770.1	Barley	nucleus	78.26	68.99
Zm00001d012823_P001	Maize	nucleus	74.31	67.63
GSMUA_Achr4P04500_001	Banana	nucleus	52.37	60.36
GSMUA_Achr3P27600_001	Banana	nucleus	47.83	56.81
VIT_02s0012g01810.t01	Wine grape	nucleus	51.19	52.22
VIT_16s0039g01840.t01	Wine grape	nucleus, plastid	52.57	51.95
PGSC0003DMT400046000	Potato	nucleus	50.79	50.59
KRH07474	Soybean	nucleus	50.99	50.59
KRH74387	Soybean	nucleus	48.81	50.41
CDX85486	Canola	nucleus	43.48	49.77
KRH39566	Soybean	nucleus	49.01	49.6
KRH77766	Soybean	nucleus	45.06	49.14
Bra023584.1-P	Field mustard	nucleus	42.89	49.09
CDY38085	Canola	nucleus	42.49	48.97
AT5G16820.2	Thale cress	nucleus	46.44	48.86
Solyc08g005170.2.1	Tomato	nucleus	50.4	48.39
Solyc03g097120.2.1	Tomato	nucleus	46.84	48.27
Bra021381.1-P	Field mustard	nucleus	43.08	48.02
PGSC0003DMT400008199	Potato	nucleus	46.64	47.97
CDY58547	Canola	nucleus	42.89	47.8
KRH27709	Soybean	nucleus	43.68	47.63
AT1G32330.1	Thale cress	nucleus	45.06	47.01
Solyc08g076590.2.1	Tomato	nucleus	45.45	46.94
Bra001071.1-P	Field mustard	nucleus	41.7	46.58
Bra040179.1-P	Field mustard	nucleus	39.72	46.53
CDX78797	Canola	nucleus	39.53	46.51
PGSC0003DMT400038381	Potato	nucleus	45.65	46.39
AT3G02990.1	Thale cress	nucleus	42.89	46.37
Bra032023.1-P	Field mustard	nucleus	41.7	46.27
CDX92026	Canola	nucleus	40.91	46.21
CDX74228	Canola	nucleus	41.5	46.15
CDY60785	Canola	nucleus	39.33	45.54
Bra023258.1-P	Field mustard	nucleus	43.48	45.17
CDX93842	Canola	nucleus	43.28	44.97
CDY01288	Canola	nucleus	43.48	44.72
CDY28731	Canola	nucleus	38.14	44.27
PGSC0003DMT400069550	Potato	nucleus	41.5	43.66
Solyc06g072750.2.1	Tomato	nucleus	41.5	43.57
CDY16977	Canola	nucleus	37.55	43.08
AT4G17750.1	Thale cress	nucleus	41.9	42.83
Os07t0178600-01	Rice	nucleus	31.42	42.74
Os10t0419300-00	Rice	nucleus	30.24	42.74
Bra008593.1-P	Field mustard	nucleus	40.12	42.03
CDX69418	Canola	nucleus	40.12	41.68
Bra035507.1-P	Field mustard	nucleus	34.78	41.22
CDY44649	Canola	nucleus	36.56	38.95
Os01t0733200-01	Rice	nucleus	18.97	38.4
Os03t0161900-02	Rice	nucleus	27.27	36.41
Os06t0565200-00	Rice	nucleus	23.12	35.35
Os03t0224700-01	Rice	nucleus	26.88	33.17
CDX84097	Canola	nucleus	17.39	32.71
Os01t0749300-02	Rice	nucleus	28.06	32.27
Os02t0232000-01	Rice	nucleus	18.97	32.21
Os02t0496100-01	Rice	nucleus	29.45	31.37
Os01t0625300-01	Rice	nucleus	20.95	31.27
Os05t0530400-01	Rice	nucleus	27.87	30.72
Os01t0571300-01	Rice	mitochondrion, nucleus	23.72	29.85
Os02t0527300-01	Rice	nucleus	28.26	28.71

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	MapMan:26.4.2.1	EntrezGene:4334826	ProteinID:AAO66547.1	ProteinID:ABF99963.1
EMBL:AK100430	EMBL:AK106118	EMBL:AY344485	UniProt:B7EQF4	ProteinID:BAF13852.1	ProteinID:BAS87428.1
ncoils:Coil	EMBL:EU846983	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388	EnsemblPlantsGene:Os03g0854500	EnsemblPlants:Os03t0854500-01
PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF162	UniProt:Q84T61
SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI0000056187	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	RefSeq:XP_015630421.1
SEG:seg	:	:	:	:	:

Description

HEAT STRESS TRANSCRIPTION FACTOR A1Similar to Heat shock transcription factor 31 (Fragment). (Os03t0854500-01);Similar to Heat shock transcription factor 31 (Fragment). (Os03t0854500-02)

Coordinates

chr3:+:35989130..35992565

Molecular Weight (calculated)

55280.3 Da

IEP (calculated)

4.727

GRAVY (calculated)

-0.434

Length

506 amino acids

Sequence
(BLAST)

001: MEAAVAAAAA AAGAVTTAVA PPPGAAVSNG VATAPPPFLM KTYEMVDDPA TDAVVSWGPG NNSFVVWNTP EFARDLLPKY FKHSNFSSFV RQLNTYGFRK
101: VDPDRWEFAN EGFLRGQKHL LKTINRRKPT HGNNQVQQPQ LPAAPVPACV EVGKFGMEEE IEMLKRDKNV LMQELVRLRQ QQQTTDHQLQ TLGKRLQGME
201: QRQQQMMSFL AKAMHSPGFL AQFVQQNENS RRRIVASNKK RRLPKQDGSL DSESASLDGQ IVKYQPMINE AAKAMLRKIL KLDSSHRFES MGNSDNFLLE
301: NYMPNGQGLD SSSSTRNSGV TLAEVPANSG LPYVATSSGL SAICSTSTPQ IQCPVVLDNG IPKEVPNMSA VPSVPKAVAP GPTDINILEF PDLQDIVAEE
401: NVDIPGGGFE MPGPEGVFSL PEEGDDSVPI ETDEILYNDD TQKLPAIIDS FWEQFLVASP LSVDNDEVDS GVLDQKETQQ GNGWTKAENM ANLTEQMGLL
501: SSHHTG

Best Arabidopsis Sequence Match ( AT1G32330.2 )
(BLAST)

001: MDVSKVTTSD GGGDSMETKP SPQPQPAAIL SSNAPPPFLS KTYDMVDDHN TDSIVSWSAN NNSFIVWKPP EFARDLLPKN FKHNNFSSFV RQLNTYGFRK
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SR

Arabidopsis Description

HSFA1DHeat stress transcription factor A-1d [Source:UniProtKB/Swiss-Prot;Acc:Q9LQM7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.