Factsheet for Bra035507.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44649	Canola	nucleus	85.95	77.26
CDX84097	Canola	nucleus	40.98	65.06
Bra023258.1-P	Field mustard	nucleus	70.96	62.22
AT1G32330.1	Thale cress	nucleus	64.64	56.91
VIT_02s0012g01810.t01	Wine grape	nucleus	48.24	41.53
KRH74387	Soybean	nucleus	45.2	39.39
KRH39566	Soybean	nucleus	45.9	39.2
Bra040179.1-P	Field mustard	nucleus	39.58	39.12
KRH07474	Soybean	nucleus	46.6	39.02
GSMUA_Achr4P04500_001	Banana	nucleus	38.64	37.59
PGSC0003DMT400046000	Potato	nucleus	44.26	37.2
Solyc08g005170.2.1	Tomato	nucleus	45.9	37.19
Bra021381.1-P	Field mustard	nucleus	38.17	35.9
Bra012829.1-P	Field mustard	nucleus	20.84	35.89
Os03t0854500-01	Rice	nucleus	41.22	34.78
Bra001071.1-P	Field mustard	nucleus	36.53	34.44
GSMUA_Achr4P17040_001	Banana	nucleus	39.11	34.29
Bra023584.1-P	Field mustard	nucleus	35.36	34.16
Bra032023.1-P	Field mustard	nucleus	36.3	33.99
Solyc08g076590.2.1	Tomato	nucleus	38.41	33.47
PGSC0003DMT400038381	Potato	nucleus	38.41	32.93
EER93074	Sorghum	nucleus	40.52	32.83
Bra012828.1-P	Field mustard	nucleus	20.61	32.71
Zm00001d034886_P001	Maize	nucleus	40.05	32.45
TraesCS4A01G322300.1	Wheat	nucleus	39.58	32.44
Bra035993.1-P	Field mustard	nucleus	21.31	32.38
TraesCS5D01G553300.1	Wheat	nucleus	39.34	32.18
GSMUA_Achr3P27600_001	Banana	nucleus	32.08	32.16
TraesCS5B01G556200.1	Wheat	nucleus	39.34	31.76
Bra008593.1-P	Field mustard	nucleus	35.13	31.06
Bra000557.1-P	Field mustard	nucleus	25.29	31.03
Zm00001d012823_P001	Maize	nucleus	38.88	29.86
Bra007739.1-P	Field mustard	nucleus	19.67	29.47
HORVU5Hr1G123770.1	Barley	nucleus	39.11	29.09
Bra001885.1-P	Field mustard	nucleus	25.06	27.37
Bra023800.1-P	Field mustard	nucleus	25.29	27.14
Bra033913.1-P	Field mustard	nucleus	25.29	26.54
Bra009515.1-P	Field mustard	nucleus	21.31	25.07
Bra015050.1-P	Field mustard	nucleus	17.56	24.27
Bra013253.1-P	Field mustard	nucleus	15.93	24.2
Bra017595.1-P	Field mustard	nucleus	18.03	22.65
Bra032752.1-P	Field mustard	nucleus	22.01	19.71
Bra012571.1-P	Field mustard	nucleus	17.33	18.97
Bra020988.1-P	Field mustard	nucleus	15.22	18.62
Bra013358.1-P	Field mustard	nucleus	18.03	14.89

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	MapMan:26.4.2.1	EnsemblPlantsGene:Bra035507	EnsemblPlants:Bra035507.1	EnsemblPlants:Bra035507.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HSF_DNA-bd
InterPro:HSF_fam	InterPro:IPR036388	UniProt:M4F357	PFAM:PF00447	PANTHER:PTHR10015	PANTHER:PTHR10015:SF162
SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI00025461A9	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg

Description

AT1G32330 (E=1e-081) ATHSFA1D, HSFA1D | ATHSFA1D; DNA binding / transcription factor

Coordinates

chrA08:+:7946029..7947955

Molecular Weight (calculated)

47181.6 Da

IEP (calculated)

4.810

GRAVY (calculated)

-0.510

Length

427 amino acids

Sequence
(BLAST)

001: MAGGNRSSTI DGAESGGGSV AMESKEIPQP QPVAVLSANA PPPFLSKTYD MVDDPATDPI VSWSSNNNSF VIANFNGSFL VAFLFGQLGI NNWTCLFGQW
101: TLASYLMESI FLKQGFRKVD SDRWEFANEG FLRGQKHLLK TITRRKPAHA HGHGQQHSNG QNPSVSSCVE VGKFGLEEEV ERLKRDKNVL MQELVRLRQQ
201: QQSTDNNLQR MVQRLQGMEN RQQQLMSFLA KAVQSPHFIS QFLQQQNQQS ESSTSSKDSA SPDGQIVKYQ PPMHEQAKAM LKQLMKMEPY KTGDDGFLLG
301: DGTSTTTEME ISSNNVSGIT LQEMPTASDI QSSSLTGATP ENVTVAESPT PEEAIPSPDV LSLPEFASIL PEKTTEMPSG NFMEPDMEDF SYFLDSDLFI
401: DGDFDKLAVP LAFVQKRMRS NRGVKSG

Best Arabidopsis Sequence Match ( AT1G32330.1 )
(BLAST)

001: MDVSKVTTSD GGGDSMETKP SPQPQPAAIL SSNAPPPFLS KTYDMVDDHN TDSIVSWSAN NNSFIVWKPP EFARDLLPKN FKHNNFSSFV RQLNTYGFRK
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SRQNP

Arabidopsis Description

HSFA1DHeat stress transcription factor A-1d [Source:UniProtKB/Swiss-Prot;Acc:Q9LQM7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.