Factsheet for Bra013358.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78902	Canola	nucleus	100.0	100.0
Bra012571.1-P	Field mustard	nucleus	57.64	76.41
AT4G18880.1	Thale cress	nucleus	58.61	75.56
Bra020988.1-P	Field mustard	nucleus	50.48	74.79
Bra017595.1-P	Field mustard	nucleus	39.07	59.41
KRH11063	Soybean	nucleus	39.27	51.79
KRH21206	Soybean	nucleus	39.07	51.53
VIT_10s0003g01770.t01	Wine grape	nucleus	34.24	51.01
KRH42919	Soybean	nucleus	38.1	49.01
KRH59030	Soybean	nucleus	37.91	48.76
GSMUA_Achr8P27750_001	Banana	nucleus	19.73	46.15
Solyc03g006000.2.1	Tomato	nucleus	34.04	43.89
PGSC0003DMT400071487	Potato	nucleus	34.04	43.67
Solyc02g072000.2.1	Tomato	nucleus	34.04	43.14
EES01479	Sorghum	nucleus	29.98	35.71
Zm00001d012749_P001	Maize	nucleus	29.21	34.87
Os01t0749300-02	Rice	nucleus	29.59	34.77
TraesCS3A01G289200.1	Wheat	nucleus	29.01	34.72
HORVU3Hr1G071550.3	Barley	nucleus	28.63	34.26
Bra012828.1-P	Field mustard	nucleus	17.6	33.83
TraesCS3B01G323800.1	Wheat	nucleus	28.82	33.79
GSMUA_Achr3P15640_001	Banana	nucleus	29.4	33.55
Bra012829.1-P	Field mustard	nucleus	16.05	33.47
TraesCS3D01G289000.1	Wheat	nucleus	26.89	33.41
GSMUA_Achr6P31750_001	Banana	nucleus	31.33	33.33
Zm00001d010812_P001	Maize	nucleus	27.08	31.18
Bra007739.1-P	Field mustard	nucleus	17.02	30.88
Os05t0530400-01	Rice	nucleus	27.08	30.5
HORVU1Hr1G081300.1	Barley	nucleus	25.34	30.39
Bra035993.1-P	Field mustard	nucleus	16.05	29.54
EES18551	Sorghum	nucleus	27.08	29.41
TraesCS1A01G350400.2	Wheat	nucleus	25.15	29.35
Zm00001d038746_P001	Maize	nucleus	26.31	29.0
Bra032752.1-P	Field mustard	nucleus	25.34	27.46
Bra000557.1-P	Field mustard	nucleus	17.99	26.72
Bra023584.1-P	Field mustard	nucleus	22.63	26.47
Bra023800.1-P	Field mustard	nucleus	19.73	25.63
Bra033913.1-P	Field mustard	nucleus	20.12	25.55
Bra040179.1-P	Field mustard	nucleus	21.28	25.46
Bra032023.1-P	Field mustard	nucleus	22.44	25.44
Bra013253.1-P	Field mustard	nucleus	13.73	25.27
Bra015050.1-P	Field mustard	nucleus	15.09	25.24
Bra021381.1-P	Field mustard	nucleus	22.05	25.11
Bra001071.1-P	Field mustard	nucleus	21.86	24.94
Bra001885.1-P	Field mustard	nucleus	18.76	24.81
Bra009515.1-P	Field mustard	nucleus	17.21	24.52
Bra008593.1-P	Field mustard	nucleus	21.86	23.4
Bra023258.1-P	Field mustard	nucleus	20.7	21.97
Bra035507.1-P	Field mustard	nucleus	14.89	18.03

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	EnsemblPlantsGene:Bra013358	EnsemblPlants:Bra013358.1	EnsemblPlants:Bra013358.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam
InterPro:IPR036388	UniProt:M4DA48	PFAM:PF00447	PRINTS:PR00056	PANTHER:PTHR10015	PANTHER:PTHR10015:SF154
SMART:SM00415	SUPFAM:SSF46785	SUPFAM:SSF52058	UniParc:UPI0002546446	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf
SEG:seg	:	:	:	:	:

Description

AT4G18880 (E=8e-149) AT-HSFA4A, HSF A4A | AT-HSFA4A; DNA binding / transcription factor

Coordinates

chrA01:-:5170071..5172386

Molecular Weight (calculated)

58283.4 Da

IEP (calculated)

6.176

GRAVY (calculated)

-0.662

Length

517 amino acids

Sequence
(BLAST)

001: MDESNHGGSS SSLPPFLTKT YEMVDDSSSD SIVSWSQSNR SFIVWNPPEF SRDLLPRFFK HNNFSSFIRQ LNTYGFRKAD PEQWEFANDD FVRGQPHLMK
101: NIHRRKPVHS HSLPNLQAQQ NALTDSERQR MSSQIERLTK EKEGLLQKLH RQEQERDVFE QQVKKLKDQL QHMEKRQKTM DSYVSQVMET PELALNLSPC
201: LPETNERKRR LPRMLEDNQA CVVVREEGST SASDETEHQV EELESSIAVW ENLVSVSDDS CEGMAQSTGS MMILDVDDSS TCPESPPLSC IHLSIDTCPK
301: SPPSHKIIDI NSDVSKEQNI VAPAPPPPAT GVNDVFWQQL LTENPGSAEQ REVQPEKKED KGEDPKIKLG TARININAPF LDNPYLSPHH LASLTQSTPC
401: PPSLHSSAAA TASQDSTLLV VLTSSHRLLQ TRLRPWSLRH LGDMHKIVSL TISDANLSST PISHSSIYPK NPPTLITQLS NFEALKLSSE TISHEIPNNT
501: SYLISLKNLF LRCHSRS

Best Arabidopsis Sequence Match ( AT4G18880.1 )
(BLAST)

001: MDENNHGVSS SSLPPFLTKT YEMVDDSSSD SIVSWSQSNK SFIVWNPPEF SRDLLPRFFK HNNFSSFIRQ LNTYGFRKAD PEQWEFANDD FVRGQPHLMK
101: NIHRRKPVHS HSLPNLQAQL NPLTDSERVR MNNQIERLTK EKEGLLEELH KQDEEREVFE MQVKELKERL QHMEKRQKTM VSFVSQVLEK PGLALNLSPC
201: VPETNERKRR FPRIEFFPDE PMLEENKTCV VVREEGSTSP SSHTREHQVE QLESSIAIWE NLVSDSCESM LQSRSMMTLD VDESSTFPES PPLSCIQLSV
301: DSRLKSPPSP RIIDMNCEPD GSKEQNTVAA PPPPPVAGAN DGFWQQFFSE NPGSTEQREV QLERKDDKDK AGVRTEKCWW NSRNVNAITE QLGHLTSSER
401: S

Arabidopsis Description

HSFA4AHSF A4A [Source:UniProtKB/TrEMBL;Acc:A0A178UUP9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.