Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P06020_001 | Banana | nucleus | 32.58 | 47.37 |
| GSMUA_Achr3P15640_001 | Banana | nucleus | 69.23 | 33.77 |
| CDY13041 | Canola | nucleus | 44.8 | 32.25 |
| VIT_12s0028g01410.t01 | Wine grape | nucleus | 52.49 | 31.44 |
| VIT_10s0003g01770.t01 | Wine grape | nucleus | 48.87 | 31.12 |
| Bra017595.1-P | Field mustard | nucleus | 44.8 | 29.12 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 38.01 | 28.97 |
| CDY23108 | Canola | nucleus | 44.34 | 28.82 |
| CDY09259 | Canola | nucleus | 47.06 | 28.73 |
| KRH21206 | Soybean | nucleus | 50.23 | 28.32 |
| CDX76506 | Canola | nucleus | 46.61 | 28.14 |
| KRH11063 | Soybean | nucleus | 49.77 | 28.06 |
| Solyc07g055710.2.1 | Tomato | nucleus | 48.87 | 27.84 |
| GSMUA_Achr7P24790_001 | Banana | nucleus | 26.24 | 27.75 |
| GSMUA_Achr8P28330_001 | Banana | nucleus | 40.72 | 27.52 |
| AT5G45710.3 | Thale cress | nucleus | 42.53 | 27.25 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 41.18 | 27.25 |
| Bra020988.1-P | Field mustard | nucleus | 42.53 | 26.93 |
| CDY69818 | Canola | nucleus | 47.51 | 26.92 |
| Bra012571.1-P | Field mustard | nucleus | 47.51 | 26.92 |
| CDY01562 | Canola | nucleus | 47.51 | 26.72 |
| KRH59030 | Soybean | nucleus | 48.42 | 26.62 |
| CDX99415 | Canola | nucleus | 46.15 | 26.56 |
| GSMUA_Achr6P31750_001 | Banana | nucleus | 58.37 | 26.54 |
| AT4G18880.1 | Thale cress | nucleus | 47.96 | 26.43 |
| KRH42919 | Soybean | nucleus | 47.96 | 26.37 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 36.65 | 26.3 |
| PGSC0003DMT400044683 | Potato | nucleus | 48.42 | 25.97 |
| HORVU1Hr1G081300.1 | Barley | nucleus | 50.23 | 25.75 |
| GSMUA_Achr9P01640_001 | Banana | nucleus | 43.89 | 25.46 |
| Solyc02g072000.2.1 | Tomato | nucleus | 46.15 | 25.0 |
| Solyc03g006000.2.1 | Tomato | nucleus | 45.25 | 24.94 |
| PGSC0003DMT400071487 | Potato | nucleus | 45.25 | 24.81 |
| GSMUA_Achr6P27750_001 | Banana | nucleus | 43.89 | 24.68 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 37.1 | 24.62 |
| Os05t0530400-01 | Rice | nucleus | 51.13 | 24.62 |
| TraesCS1A01G350400.2 | Wheat | nucleus | 49.32 | 24.61 |
| Zm00001d012749_P001 | Maize | nucleus | 47.96 | 24.48 |
| EES01479 | Sorghum | nucleus | 47.51 | 24.19 |
| Os01t0749300-02 | Rice | nucleus | 47.51 | 23.86 |
| TraesCS3A01G289200.1 | Wheat | nucleus | 46.61 | 23.84 |
| HORVU3Hr1G071550.3 | Barley | nucleus | 46.61 | 23.84 |
| Zm00001d010812_P001 | Maize | nucleus | 48.42 | 23.83 |
| GSMUA_Achr4P30990_001 | Banana | nucleus | 30.77 | 23.53 |
| GSMUA_Achr4P04500_001 | Banana | nucleus | 46.61 | 23.46 |
| GSMUA_Achr6P00960_001 | Banana | nucleus | 33.03 | 23.32 |
| TraesCS3B01G323800.1 | Wheat | nucleus | 46.15 | 23.13 |
| GSMUA_Achr2P16660_001 | Banana | nucleus | 28.51 | 23.08 |
| EES18551 | Sorghum | nucleus | 49.32 | 22.9 |
| GSMUA_Achr2P21640_001 | Banana | nucleus | 33.94 | 22.59 |
| GSMUA_Achr3P15740_001 | Banana | nucleus | 28.05 | 22.46 |
| Zm00001d038746_P001 | Maize | nucleus | 46.61 | 21.96 |
| TraesCS3D01G289000.1 | Wheat | nucleus | 41.18 | 21.88 |
| GSMUA_Achr4P17040_001 | Banana | nucleus | 45.25 | 20.53 |
| GSMUA_Achr3P27600_001 | Banana | nucleus | 39.37 | 20.42 |
| GSMUA_Achr3P31860_001 | Banana | nucleus | 29.41 | 20.06 |
| GSMUA_Achr10P... | Banana | nucleus | 27.6 | 20.0 |
| CDX78902 | Canola | nucleus | 46.15 | 19.73 |
| Bra013358.1-P | Field mustard | nucleus | 46.15 | 19.73 |
| GSMUA_Achr8P27820_001 | Banana | nucleus | 29.86 | 18.18 |
| GSMUA_Achr5P15900_001 | Banana | nucleus | 36.65 | 14.81 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr8G27750_001 | EnsemblPlants:GSMUA_Achr8P27750_001 | EnsemblPlants:GSMUA_Achr8T27750_001 | InterPro:HSF_DNA-bd | InterPro:HSF_fam |
| InterPro:IPR036388 | UniProt:M0TU78 | PFAM:PF00447 | PRINTS:PR00056 | ScanProsite:PS00434 | PANTHER:PTHR10015 |
| PANTHER:PTHR10015:SF154 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0002956C04 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf |
| SEG:seg | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G27750_001]
Coordinates
chr8:+:30793682..30794765
Molecular Weight (calculated)
25667.8 Da
IEP (calculated)
10.219
GRAVY (calculated)
-0.590
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MESPLASTNS PPAFLTKTYE MVDDPTTNSI VSWSLTNASF VVWNQLEFAR DLLPRYFKHN NFSSFVRQLN TYGFRKIEPD QWEFANEGFK RGQRHLLNNI
101: HRRKPVHSHS LHGQLNSSAP LSDAEKQELE EEIERLKQEK VVLVNELQKQ HTQVQHQMRS LEGRLQALGN RLRAQGRGGC LILIASMRML TSMTIKLQFS
201: SQTFLPCKHL TRSLLRCWNH P
101: HRRKPVHSHS LHGQLNSSAP LSDAEKQELE EEIERLKQEK VVLVNELQKQ HTQVQHQMRS LEGRLQALGN RLRAQGRGGC LILIASMRML TSMTIKLQFS
201: SQTFLPCKHL TRSLLRCWNH P
001: MDVSKVTTSD GGGDSMETKP SPQPQPAAIL SSNAPPPFLS KTYDMVDDHN TDSIVSWSAN NNSFIVWKPP EFARDLLPKN FKHNNFSSFV RQLNTYGFRK
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SRQNP
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SRQNP
Arabidopsis Description
HSFA1DHeat stress transcription factor A-1d [Source:UniProtKB/Swiss-Prot;Acc:Q9LQM7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.