Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P06020_001 | Banana | nucleus | 22.59 | 49.34 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 35.84 | 41.03 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 35.54 | 38.31 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 36.75 | 36.64 |
| GSMUA_Achr7P24790_001 | Banana | nucleus | 22.29 | 35.41 |
| GSMUA_Achr2P16660_001 | Banana | nucleus | 28.31 | 34.43 |
| GSMUA_Achr8P27750_001 | Banana | nucleus | 22.59 | 33.94 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 34.04 | 33.83 |
| GSMUA_Achr6P00960_001 | Banana | nucleus | 31.33 | 33.23 |
| GSMUA_Achr3P15740_001 | Banana | nucleus | 25.9 | 31.16 |
| GSMUA_Achr3P27600_001 | Banana | nucleus | 39.76 | 30.99 |
| GSMUA_Achr4P30990_001 | Banana | nucleus | 26.81 | 30.8 |
| GSMUA_Achr4P04500_001 | Banana | nucleus | 39.76 | 30.07 |
| TraesCS4D01G239600.1 | Wheat | nucleus | 34.04 | 29.43 |
| TraesCS4B01G239700.1 | Wheat | nucleus | 33.43 | 28.91 |
| TraesCS4A01G062800.1 | Wheat | nucleus | 33.13 | 28.72 |
| GSMUA_Achr3P31860_001 | Banana | nucleus | 26.51 | 27.16 |
| EER95242 | Sorghum | nucleus | 33.73 | 26.99 |
| GSMUA_Achr8P28330_001 | Banana | nucleus | 26.51 | 26.91 |
| Os03t0224700-01 | Rice | nucleus | 32.83 | 26.59 |
| GSMUA_Achr4P17040_001 | Banana | nucleus | 38.86 | 26.49 |
| GSMUA_Achr10P... | Banana | nucleus | 23.49 | 25.57 |
| GSMUA_Achr6P27750_001 | Banana | nucleus | 30.12 | 25.45 |
| HORVU0Hr1G008940.2 | Barley | cytosol, nucleus | 22.29 | 25.26 |
| GSMUA_Achr9P01640_001 | Banana | nucleus | 28.92 | 25.2 |
| Zm00001d048041_P004 | Maize | nucleus | 34.04 | 25.0 |
| GSMUA_Achr3P15640_001 | Banana | nucleus | 33.13 | 24.28 |
| GSMUA_Achr8P27820_001 | Banana | nucleus | 26.51 | 24.24 |
| GSMUA_Achr6P31750_001 | Banana | nucleus | 32.53 | 22.22 |
| GSMUA_Achr5P15900_001 | Banana | nucleus | 25.6 | 15.54 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSMUA_Achr2G21640_001 | EnsemblPlants:GSMUA_Achr2P21640_001 | EnsemblPlants:GSMUA_Achr2T21640_001 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 |
| UniProt:M0SA05 | PFAM:PF00447 | PRINTS:PR00056 | ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF162 |
| SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI00029578A0 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G21640_001]
Coordinates
chr2:+:21031681..21034199
Molecular Weight (calculated)
37437.3 Da
IEP (calculated)
5.395
GRAVY (calculated)
-0.537
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGGGSSLV PVLPPFLTKC YDMVDDPSTD DTVSWSKTSD SFVIWDPHAF SQDLLPKYFK HSNLSSFVRQ LNTYGFHKVD PDRWEFANEG FLRGQKHLLK
101: TIARRKPAHN NIVPPPQQPH RKTESVNGII EELIKVRQHQ QNSELELHSL VRRIRCMEQK QLEMMSLLAM VVQTPNFIAQ LVQQNVNDRW SNINKRRRQL
201: PPPEHNVLEG AEAVSDGQMI KYQPFAPEIM KSSFLPVANS KESGSVFNDL HSNGVSMTVG DDLALPLQEN GSLTNLEDLE QLLASSAGEN SEQIEPGALA
301: EYMRSLDFTE QETDGYMGNL TSEKGSNNMV VW
101: TIARRKPAHN NIVPPPQQPH RKTESVNGII EELIKVRQHQ QNSELELHSL VRRIRCMEQK QLEMMSLLAM VVQTPNFIAQ LVQQNVNDRW SNINKRRRQL
201: PPPEHNVLEG AEAVSDGQMI KYQPFAPEIM KSSFLPVANS KESGSVFNDL HSNGVSMTVG DDLALPLQEN GSLTNLEDLE QLLASSAGEN SEQIEPGALA
301: EYMRSLDFTE QETDGYMGNL TSEKGSNNMV VW
001: MDVSKVTTSD GGGDSMETKP SPQPQPAAIL SSNAPPPFLS KTYDMVDDHN TDSIVSWSAN NNSFIVWKPP EFARDLLPKN FKHNNFSSFV RQLNTYGFRK
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SRQNP
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SRQNP
Arabidopsis Description
HSFA1DHeat stress transcription factor A-1d [Source:UniProtKB/Swiss-Prot;Acc:Q9LQM7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.