Factsheet for GSMUA_Achr3P15640_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P27750_001	Banana	nucleus	33.77	69.23
GSMUA_Achr6P31750_001	Banana	nucleus	61.15	57.0
GSMUA_Achr3P06020_001	Banana	nucleus	17.22	51.32
EES01479	Sorghum	nucleus	48.79	50.92
VIT_12s0028g01410.t01	Wine grape	nucleus	41.28	50.68
Zm00001d012749_P001	Maize	nucleus	48.34	50.58
Os01t0749300-02	Rice	nucleus	49.01	50.45
HORVU3Hr1G071550.3	Barley	nucleus	47.02	49.31
TraesCS3A01G289200.1	Wheat	nucleus	46.58	48.84
TraesCS3B01G323800.1	Wheat	nucleus	47.46	48.75
VIT_10s0003g01770.t01	Wine grape	nucleus	37.09	48.41
TraesCS3D01G289000.1	Wheat	nucleus	42.83	46.63
CDY13041	Canola	nucleus	31.57	46.58
KRH21206	Soybean	nucleus	39.74	45.92
Bra017595.1-P	Field mustard	nucleus	34.0	45.29
CDY23108	Canola	nucleus	33.77	45.0
AT5G45710.3	Thale cress	nucleus	34.0	44.64
KRH11063	Soybean	nucleus	37.97	43.88
KRH59030	Soybean	nucleus	38.85	43.78
KRH42919	Soybean	nucleus	38.41	43.28
Solyc03g006000.2.1	Tomato	nucleus	37.75	42.64
CDY09259	Canola	nucleus	34.0	42.54
CDX76506	Canola	nucleus	34.22	42.35
PGSC0003DMT400071487	Potato	nucleus	37.53	42.18
Bra020988.1-P	Field mustard	nucleus	32.45	42.12
Zm00001d010812_P001	Maize	nucleus	41.5	41.87
Solyc02g072000.2.1	Tomato	nucleus	37.53	41.67
HORVU1Hr1G081300.1	Barley	nucleus	39.51	41.53
Solyc07g055710.2.1	Tomato	nucleus	35.1	40.98
AT4G18880.1	Thale cress	nucleus	36.2	40.9
Bra012571.1-P	Field mustard	nucleus	35.1	40.77
EES18551	Sorghum	nucleus	42.83	40.76
Os05t0530400-01	Rice	nucleus	41.28	40.74
GSMUA_Achr8P20520_001	Banana	nucleus	26.05	40.69
CDY69818	Canola	nucleus	34.88	40.51
CDY01562	Canola	nucleus	35.1	40.46
Zm00001d038746_P001	Maize	nucleus	41.72	40.3
PGSC0003DMT400044683	Potato	nucleus	36.64	40.29
CDX99415	Canola	nucleus	34.0	40.1
TraesCS1A01G350400.2	Wheat	nucleus	39.07	39.95
GSMUA_Achr8P28330_001	Banana	nucleus	27.15	37.61
GSMUA_Achr9P01640_001	Banana	nucleus	30.91	36.75
GSMUA_Achr5P03000_001	Banana	nucleus	26.93	36.53
GSMUA_Achr6P27750_001	Banana	nucleus	31.35	36.13
GSMUA_Achr6P24430_001	Banana	nucleus	24.06	35.39
GSMUA_Achr4P04500_001	Banana	nucleus	33.55	34.62
GSMUA_Achr1P27200_001	Banana	nucleus	24.94	33.93
GSMUA_Achr6P00960_001	Banana	nucleus	23.4	33.87
GSMUA_Achr2P16660_001	Banana	nucleus	20.31	33.7
GSMUA_Achr7P24790_001	Banana	nucleus	15.45	33.49
GSMUA_Achr2P21640_001	Banana	nucleus	24.28	33.13
GSMUA_Achr3P27600_001	Banana	nucleus	29.8	31.69
GSMUA_Achr4P17040_001	Banana	nucleus	32.45	30.18
GSMUA_Achr3P15740_001	Banana	nucleus	18.32	30.07
CDX78902	Canola	nucleus	33.55	29.4
Bra013358.1-P	Field mustard	nucleus	33.55	29.4
GSMUA_Achr3P31860_001	Banana	nucleus	20.53	28.7
GSMUA_Achr4P30990_001	Banana	nucleus	18.1	28.37
GSMUA_Achr10P...	Banana	nucleus	17.44	25.9
GSMUA_Achr8P27820_001	Banana	nucleus	19.21	23.97
GSMUA_Achr5P15900_001	Banana	nucleus	23.62	19.56

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr3G15640_001	EnsemblPlants:GSMUA_Achr3P15640_001	EnsemblPlants:GSMUA_Achr3T15640_001	InterPro:HSF_DNA-bd	InterPro:HSF_fam
InterPro:IPR036388	UniProt:M0SEY0	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015
PANTHER:PTHR10015:SF154	SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI000294D238	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf
SEG:seg	:	:	:	:	:

Description

Heat stress transcription factor A-4b [Source:GMGC_GENE;Acc:GSMUA_Achr3G15640_001]

Coordinates

chr3:+:16716791..16718898

Molecular Weight (calculated)

51442.2 Da

IEP (calculated)

4.656

GRAVY (calculated)

-0.622

Length

453 amino acids

Sequence
(BLAST)

001: MESPRGSSSS SSPPPFLTKT YEMVDDPATN SIVSWSPTNL SFVVWNQLEF ARDLLPKYFK HSNFSSFVRQ LNTYGFRKID PDQWEFANED FIRGEKHLLK
101: NIHRRKPVYS HSPHNQGSSS GPLSEAQKQD LEEEIERLKQ EKAMLVNELQ KNVHKQHGME HQMQSLEERL QVLGDRHRNL MAFLTQIVQE PWFLSNLVQD
201: SDLLSKKRRL PKINYFNEDT AMEDNQIVTF QQPLAGEKSG YASIQIFDME PFEKMESSLN SLENFFRGVS QTSGDDMCYD SIVACLPTDV LLTEMNASSV
301: ETGASLQSLL PNLYPSSPCL GDIHSSPETA ECMSHVETPG IPAAENQTDS RIKVAEIDVN LEPAATEVDS LRDQATSTTT STMPTGVNDV FWEQFLTEIP
401: DSSVTKVVQL KRRDSDDEQS EGKIREVENM CRNRINVDHF VEKMANLTSV EKT

Best Arabidopsis Sequence Match ( AT4G18880.1 )
(BLAST)

001: MDENNHGVSS SSLPPFLTKT YEMVDDSSSD SIVSWSQSNK SFIVWNPPEF SRDLLPRFFK HNNFSSFIRQ LNTYGFRKAD PEQWEFANDD FVRGQPHLMK
101: NIHRRKPVHS HSLPNLQAQL NPLTDSERVR MNNQIERLTK EKEGLLEELH KQDEEREVFE MQVKELKERL QHMEKRQKTM VSFVSQVLEK PGLALNLSPC
201: VPETNERKRR FPRIEFFPDE PMLEENKTCV VVREEGSTSP SSHTREHQVE QLESSIAIWE NLVSDSCESM LQSRSMMTLD VDESSTFPES PPLSCIQLSV
301: DSRLKSPPSP RIIDMNCEPD GSKEQNTVAA PPPPPVAGAN DGFWQQFFSE NPGSTEQREV QLERKDDKDK AGVRTEKCWW NSRNVNAITE QLGHLTSSER
401: S

Arabidopsis Description

HSFA4AHSF A4A [Source:UniProtKB/TrEMBL;Acc:A0A178UUP9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.