Factsheet for HORVU3Hr1G071550.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G289200.1	Wheat	nucleus	92.13	92.13
TraesCS3D01G289000.1	Wheat	nucleus	86.81	90.14
TraesCS3B01G323800.1	Wheat	nucleus	91.67	89.8
Os01t0749300-02	Rice	nucleus	75.69	74.32
EES01479	Sorghum	nucleus	72.92	72.58
Zm00001d012749_P001	Maize	nucleus	70.14	69.98
GSMUA_Achr3P15640_001	Banana	nucleus	49.31	47.02
VIT_12s0028g01410.t01	Wine grape	nucleus	39.81	46.61
GSMUA_Achr8P27750_001	Banana	nucleus	23.84	46.61
HORVU7Hr1G034320.1	Barley	nucleus, plastid	14.12	45.52
AT5G45710.3	Thale cress	nucleus	36.11	45.22
CDY13041	Canola	nucleus	31.94	44.95
CDY23108	Canola	nucleus	34.72	44.12
Bra017595.1-P	Field mustard	nucleus	34.72	44.12
VIT_10s0003g01770.t01	Wine grape	nucleus	34.95	43.52
CDX76506	Canola	nucleus	36.34	42.9
CDY09259	Canola	nucleus	35.88	42.82
Bra020988.1-P	Field mustard	nucleus	34.03	42.12
KRH21206	Soybean	nucleus	38.19	42.09
KRH11063	Soybean	nucleus	37.96	41.84
Solyc07g055710.2.1	Tomato	nucleus	37.5	41.75
Bra012571.1-P	Field mustard	nucleus	37.5	41.54
PGSC0003DMT400044683	Potato	nucleus	39.58	41.5
CDY69818	Canola	nucleus	37.27	41.28
CDY01562	Canola	nucleus	37.5	41.22
AT4G18880.1	Thale cress	nucleus	38.19	41.15
CDX99415	Canola	nucleus	36.57	41.15
KRH59030	Soybean	nucleus	37.73	40.55
GSMUA_Achr6P31750_001	Banana	nucleus	45.6	40.53
Solyc03g006000.2.1	Tomato	nucleus	37.5	40.4
KRH42919	Soybean	nucleus	37.5	40.3
PGSC0003DMT400071487	Potato	nucleus	37.5	40.2
Solyc02g072000.2.1	Tomato	nucleus	37.5	39.71
HORVU1Hr1G081300.1	Barley	nucleus	39.35	39.44
HORVU7Hr1G055320.1	Barley	mitochondrion, nucleus	14.35	38.27
HORVU2Hr1G043030.1	Barley	nucleus	10.65	29.68
HORVU6Hr1G017910.1	Barley	nucleus	31.02	29.32
HORVU7Hr1G119990.1	Barley	nucleus	16.44	29.22
CDX78902	Canola	nucleus	34.26	28.63
Bra013358.1-P	Field mustard	nucleus	34.26	28.63
HORVU7Hr1G088920.3	Barley	nucleus	17.59	28.57
HORVU4Hr1G073650.2	Barley	nucleus	21.99	27.62
HORVU1Hr1G083420.2	Barley	nucleus	23.61	27.42
HORVU3Hr1G088890.2	Barley	nucleus	17.59	26.3
HORVU3Hr1G055960.1	Barley	nucleus	19.68	25.99
HORVU5Hr1G094380.1	Barley	nucleus	21.76	25.34
HORVU4Hr1G090090.4	Barley	nucleus, plastid	17.36	25.25
HORVU2Hr1G014590.1	Barley	nucleus	24.31	25.12
HORVU4Hr1G090850.1	Barley	nucleus	18.52	23.81
HORVU5Hr1G123770.1	Barley	nucleus	30.79	23.17
HORVU7Hr1G087690.1	Barley	nucleus	19.21	22.74
HORVU3Hr1G069590.4	Barley	nucleus, plastid	10.65	19.41
HORVU5Hr1G105770.2	Barley	nucleus	23.15	19.19
HORVU0Hr1G008940.2	Barley	cytosol, nucleus	12.27	18.09

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	EMBL:AK371121	ncoils:Coil	UniProt:F2E4P7	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU3Hr1G071550	EnsemblPlants:HORVU3Hr1G071550.3	InterPro:HSF_DNA-bd
InterPro:HSF_fam	InterPro:IPR036388	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015
PANTHER:PTHR10015:SF154	SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI0002007C39	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf
SEG:seg	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E4P7]

Coordinates

chrchr3H:+:541043018..541050415

Molecular Weight (calculated)

48547.9 Da

IEP (calculated)

5.340

GRAVY (calculated)

-0.856

Length

432 amino acids

Sequence
(BLAST)

001: MEGSGGSSSL PPFLIKTYEM VDEPATDAVV AWTPSGTSFV VFSQADFCRD LLPKYFKHNN FSSFVRQLNT YGFRKVDPEQ WEFANEEFIR DQRHRLKNIH
101: RRKPIFSHSS HTQGAGPLAD SERRDYEEEI ERLKCENASL NLQLERKKTD MDSKMKALED KLLAIEDQQR NLISYVTEIV KAPGFLSSFI EQSDHHGKKR
201: RLPKSISFHE GASTQGNQIM HCDLANSPAH KLYRESFDKM ESSLNSLENF FKEATEALGN DISYDGDVPR HSSAVVLTEL HSSGESDPHA QSPPSMMHTC
301: SAGVGDSHSS RDIAESASCP ESPPLPEAHS RADSRAKVSD IDVNLEPAVT ETGPSRDQQP TQDPPADAND GFWQQFLTEQ PGSSDTHQEA QSERRDREAN
401: QTVTRDRGSF WWGKSVEQMT EKLGHLTSAE KT

Best Arabidopsis Sequence Match ( AT4G18880.1 )
(BLAST)

001: MDENNHGVSS SSLPPFLTKT YEMVDDSSSD SIVSWSQSNK SFIVWNPPEF SRDLLPRFFK HNNFSSFIRQ LNTYGFRKAD PEQWEFANDD FVRGQPHLMK
101: NIHRRKPVHS HSLPNLQAQL NPLTDSERVR MNNQIERLTK EKEGLLEELH KQDEEREVFE MQVKELKERL QHMEKRQKTM VSFVSQVLEK PGLALNLSPC
201: VPETNERKRR FPRIEFFPDE PMLEENKTCV VVREEGSTSP SSHTREHQVE QLESSIAIWE NLVSDSCESM LQSRSMMTLD VDESSTFPES PPLSCIQLSV
301: DSRLKSPPSP RIIDMNCEPD GSKEQNTVAA PPPPPVAGAN DGFWQQFFSE NPGSTEQREV QLERKDDKDK AGVRTEKCWW NSRNVNAITE QLGHLTSSER
401: S

Arabidopsis Description

HSFA4AHSF A4A [Source:UniProtKB/TrEMBL;Acc:A0A178UUP9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.