Factsheet for Bra012571.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69818	Canola	nucleus	99.49	99.49
Bra020988.1-P	Field mustard	nucleus	75.9	84.81
AT4G18880.1	Thale cress	nucleus	82.82	80.55
Bra017595.1-P	Field mustard	nucleus	54.1	62.06
Bra013358.1-P	Field mustard	nucleus	76.41	57.64
KRH11063	Soybean	nucleus	54.87	54.59
KRH21206	Soybean	nucleus	54.87	54.59
KRH42919	Soybean	nucleus	55.13	53.48
VIT_10s0003g01770.t01	Wine grape	nucleus	47.44	53.31
KRH59030	Soybean	nucleus	54.36	52.74
Solyc02g072000.2.1	Tomato	nucleus	49.74	47.55
GSMUA_Achr8P27750_001	Banana	nucleus	26.92	47.51
Solyc03g006000.2.1	Tomato	nucleus	47.18	45.89
PGSC0003DMT400071487	Potato	nucleus	47.18	45.66
EES01479	Sorghum	nucleus	42.05	37.79
Os01t0749300-02	Rice	nucleus	42.56	37.73
TraesCS3A01G289200.1	Wheat	nucleus	41.54	37.5
HORVU3Hr1G071550.3	Barley	nucleus	41.54	37.5
Zm00001d012749_P001	Maize	nucleus	41.28	37.18
TraesCS3B01G323800.1	Wheat	nucleus	41.54	36.73
GSMUA_Achr3P15640_001	Banana	nucleus	40.77	35.1
TraesCS3D01G289000.1	Wheat	nucleus	37.44	35.1
HORVU1Hr1G081300.1	Barley	nucleus	38.72	35.03
GSMUA_Achr6P31750_001	Banana	nucleus	43.33	34.77
Bra012829.1-P	Field mustard	nucleus	22.05	34.68
Bra012828.1-P	Field mustard	nucleus	23.85	34.57
TraesCS1A01G350400.2	Wheat	nucleus	38.72	34.09
Zm00001d010812_P001	Maize	nucleus	38.72	33.63
EES18551	Sorghum	nucleus	39.74	32.56
Os05t0530400-01	Rice	nucleus	38.21	32.46
Zm00001d038746_P001	Maize	nucleus	38.21	31.77
Bra007739.1-P	Field mustard	nucleus	22.56	30.88
Bra035993.1-P	Field mustard	nucleus	21.79	30.25
Bra000557.1-P	Field mustard	nucleus	24.62	27.59
Bra033913.1-P	Field mustard	nucleus	28.72	27.52
Bra023584.1-P	Field mustard	nucleus	31.03	27.38
Bra023800.1-P	Field mustard	nucleus	27.69	27.14
Bra001885.1-P	Field mustard	nucleus	26.92	26.85
Bra040179.1-P	Field mustard	nucleus	29.74	26.85
Bra001071.1-P	Field mustard	nucleus	31.03	26.71
Bra032752.1-P	Field mustard	nucleus	32.56	26.62
Bra021381.1-P	Field mustard	nucleus	30.26	25.99
Bra032023.1-P	Field mustard	nucleus	30.26	25.88
Bra013253.1-P	Field mustard	nucleus	18.46	25.62
Bra015050.1-P	Field mustard	nucleus	19.74	24.92
Bra008593.1-P	Field mustard	nucleus	30.51	24.64
Bra009515.1-P	Field mustard	nucleus	22.56	24.24
Bra023258.1-P	Field mustard	nucleus	27.69	22.18
Bra035507.1-P	Field mustard	nucleus	18.97	17.33

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	EnsemblPlantsGene:Bra012571	EnsemblPlants:Bra012571.1	EnsemblPlants:Bra012571.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam
InterPro:IPR036388	UniProt:M4D7W1	PFAM:PF00447	PRINTS:PR00056	PANTHER:PTHR10015	PANTHER:PTHR10015:SF154
SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI00025403CE	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg

Description

AT4G18880 (E=7e-152) AT-HSFA4A, HSF A4A | AT-HSFA4A; DNA binding / transcription factor

Coordinates

chrA03:-:23480791..23482034

Molecular Weight (calculated)

44964.3 Da

IEP (calculated)

5.242

GRAVY (calculated)

-0.931

Length

390 amino acids

Sequence
(BLAST)

001: MDESSHGGSS STSLPPFLTK TYEMVDDSSS DSIVSWSQSN KSFIVWNPPE FSRDLLPKFF KHNNFSSFIR QLNTYGFRKA DPEQWEFAND DFVRGQPHLM
101: KNIHRRKPVH SHSLPNLQPH PLTDSERQRM NDKIERLTKE KQVLLEELHK HEEERELFEQ QVKKLKDQLH HMEKRQRTMV SSVSQVLEKP ELALNLSPCL
201: PEANDRKRRF PRVVGLETML EENHQTCGAV REEGSTSTSS HDATEHQVER LESSIAIWEN LVSDSCESME QQETRNMMTL DVDESSTCPE SPPLSCIQLS
301: IDIRLKSPPS PRTIDMNSEP DVSKEQNTVS PTPPAVGAND VFWQQLLTEN PGSTEQREVQ SEKAEERSEK YWWNSRNVNT ITEQLGHLTS

Best Arabidopsis Sequence Match ( AT4G18880.1 )
(BLAST)

001: MDENNHGVSS SSLPPFLTKT YEMVDDSSSD SIVSWSQSNK SFIVWNPPEF SRDLLPRFFK HNNFSSFIRQ LNTYGFRKAD PEQWEFANDD FVRGQPHLMK
101: NIHRRKPVHS HSLPNLQAQL NPLTDSERVR MNNQIERLTK EKEGLLEELH KQDEEREVFE MQVKELKERL QHMEKRQKTM VSFVSQVLEK PGLALNLSPC
201: VPETNERKRR FPRIEFFPDE PMLEENKTCV VVREEGSTSP SSHTREHQVE QLESSIAIWE NLVSDSCESM LQSRSMMTLD VDESSTFPES PPLSCIQLSV
301: DSRLKSPPSP RIIDMNCEPD GSKEQNTVAA PPPPPVAGAN DGFWQQFFSE NPGSTEQREV QLERKDDKDK AGVRTEKCWW NSRNVNAITE QLGHLTSSER
401: S

Arabidopsis Description

HSFA4AHSF A4A [Source:UniProtKB/TrEMBL;Acc:A0A178UUP9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.