Factsheet for Bra000557.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000557.1-P
Bra003119.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26150.1	Bra000557.1-P	AT2G26150.1	21510947
AT2G26150.1	Bra003119.1-P	AT5G52640.1	19366428

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83217	Canola	nucleus	98.85	92.23
AT2G26150.1	Thale cress	nucleus	86.49	87.25
KRH05436	Soybean	nucleus	54.02	52.96
KRH15573	Soybean	nucleus	55.17	52.75
VIT_04s0008g01110.t01	Wine grape	nucleus	57.47	51.55
KRH61515	Soybean	nucleus	54.89	51.34
GSMUA_Achr2P16660_001	Banana	nucleus	39.94	50.92
PGSC0003DMT400021234	Potato	nucleus	50.29	49.58
Bra012829.1-P	Field mustard	nucleus	33.05	46.37
GSMUA_Achr6P00960_001	Banana	nucleus	41.67	46.33
Bra012828.1-P	Field mustard	nucleus	32.76	42.38
Os06t0565200-00	Rice	nucleus	36.49	38.37
Bra007739.1-P	Field mustard	nucleus	31.32	38.25
Bra035993.1-P	Field mustard	nucleus	29.89	37.01
Bra033913.1-P	Field mustard	nucleus	41.95	35.87
TraesCS7B01G267300.1	Wheat	nucleus	36.21	35.69
Bra001885.1-P	Field mustard	nucleus	39.37	35.04
Bra023800.1-P	Field mustard	nucleus	39.94	34.92
TraesCS7A01G360400.1	Wheat	nucleus	35.34	34.36
Zm00001d046204_P001	Maize	nucleus	35.34	33.7
HORVU7Hr1G087690.1	Barley	nucleus	34.48	32.88
Os01t0571300-01	Rice	mitochondrion, nucleus	36.78	31.84
Bra040179.1-P	Field mustard	nucleus	38.51	31.02
EES00942	Sorghum	plastid	35.06	30.96
Bra013253.1-P	Field mustard	nucleus	24.43	30.25
Bra015050.1-P	Field mustard	nucleus	26.72	30.1
Bra021381.1-P	Field mustard	nucleus	37.07	28.41
KXG20211	Sorghum	nucleus	33.91	28.3
Bra023584.1-P	Field mustard	nucleus	35.63	28.05
Bra017595.1-P	Field mustard	nucleus	27.3	27.94
Bra032023.1-P	Field mustard	nucleus	36.49	27.85
Bra009515.1-P	Field mustard	nucleus	28.74	27.55
Bra023258.1-P	Field mustard	nucleus	38.51	27.52
Bra001071.1-P	Field mustard	nucleus	35.63	27.37
Zm00001d044259_P001	Maize	plastid	29.6	27.32
Bra008593.1-P	Field mustard	nucleus	35.63	25.67
Bra035507.1-P	Field mustard	nucleus	31.03	25.29
Bra012571.1-P	Field mustard	nucleus	27.59	24.62
Bra020988.1-P	Field mustard	nucleus	24.14	24.07
Bra032752.1-P	Field mustard	nucleus	28.74	20.96
Bra013358.1-P	Field mustard	nucleus	26.72	17.99

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	EnsemblPlantsGene:Bra000557	EnsemblPlants:Bra000557.1	EnsemblPlants:Bra000557.1-P	ncoils:Coil
GO:GO:0001666	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009408	GO:GO:0009628
GO:GO:0009644	GO:GO:0009719	GO:GO:0009987	GO:GO:0010200	GO:GO:0010286	GO:GO:0034605
GO:GO:0034620	GO:GO:0042542	GO:GO:0043565	GO:GO:0044212	GO:GO:0045893	GO:GO:0071456
InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388	UniProt:M4C8M9	PFAM:PF00447	PRINTS:PR00056
ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF186	SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI00025400B6
InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg	:	:	:

Description

AT2G26150 (E=2e-155) ATHSFA2, HSFA2 | ATHSFA2; DNA binding / transcription factor

Coordinates

chrA03:+:11761957..11763340

Molecular Weight (calculated)

39113.1 Da

IEP (calculated)

4.732

GRAVY (calculated)

-0.579

Length

348 amino acids

Sequence
(BLAST)

001: MEQQLKVELE EETVTYGGSA AASSSVGSSS SPRPMEGLNE TGPPPFLTKT YDMVEDPATD TVVSWSNGRN SFIVWDSHKF STTLLPRFFK HSNFSSFIRQ
101: LNTYGFRKID PDRWEFANEG FLAGQKHLLK SIKRRRNMGL QTVNQQGSGS GSGSGMSCVE VGQYGFEGEV ERLKRDHSVL VAEVVRLRQQ QHNSKSQVAE
201: MEQRLLVTEK RQQQMMTFLA KALNNPNFVQ QFALMSKEKK GLFGSDVGRK RRLTSSPSLG TIEERVLHDH MEFDRMKDDM ETLLAAAIDD EASEDEQCLE
301: AMNVMMEDGP LEPEIDVKVE DLVASPLDWG SEDLHDIVDQ MGFLGSEP

Best Arabidopsis Sequence Match ( AT2G26150.4 )
(BLAST)

001: MEELKVEMEE ETVTFTGSVA ASSSVGSSSS PRPMEGLNET GPPPFLTKTY EMVEDPATDT VVSWSNGRNS FVVWDSHKFS TTLLPRYFKH SNFSSFIRQL
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP

Arabidopsis Description

HSFA2Heat stress transcription factor A-2 [Source:UniProtKB/Swiss-Prot;Acc:O80982]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.