Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0571300-01 | |
| Os04t0107900-02 | |
| Os06t0565200-00 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G26150.1 | Os01t0571300-01 | AT2G26150.1 | 21510947 |
| AT2G26150.1 | Os06t0565200-00 | AT2G26150.1 | 21510947 |
| AT2G26150.1 | Os04t0107900-02 | AT5G52640.1 | 19366428 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G267300.1 | Wheat | nucleus | 64.65 | 60.62 |
| TraesCS7A01G360400.1 | Wheat | nucleus | 63.75 | 58.94 |
| Zm00001d046204_P001 | Maize | nucleus | 64.65 | 58.63 |
| HORVU7Hr1G087690.1 | Barley | nucleus | 63.75 | 57.81 |
| KXG20211 | Sorghum | nucleus | 62.54 | 49.64 |
| GSMUA_Achr2P16660_001 | Banana | nucleus | 38.07 | 46.15 |
| GSMUA_Achr6P00960_001 | Banana | nucleus | 42.6 | 45.05 |
| KRH05436 | Soybean | nucleus | 40.18 | 37.46 |
| PGSC0003DMT400021234 | Potato | nucleus | 39.58 | 37.11 |
| AT2G26150.1 | Thale cress | nucleus | 38.37 | 36.81 |
| CDY21503 | Canola | nucleus | 38.67 | 36.68 |
| Bra000557.1-P | Field mustard | nucleus | 38.37 | 36.49 |
| KRH15573 | Soybean | nucleus | 39.58 | 35.99 |
| VIT_04s0008g01110.t01 | Wine grape | nucleus | 41.69 | 35.57 |
| Os10t0419300-00 | Rice | nucleus | 38.37 | 35.47 |
| Os01t0733200-01 | Rice | nucleus | 26.59 | 35.2 |
| KRH61515 | Soybean | nucleus | 38.97 | 34.68 |
| CDX83217 | Canola | nucleus | 38.37 | 34.05 |
| Os07t0178600-01 | Rice | nucleus | 37.76 | 33.6 |
| Os02t0232000-01 | Rice | nucleus | 29.61 | 32.89 |
| Os03t0161900-02 | Rice | nucleus | 35.95 | 31.4 |
| Os01t0571300-01 | Rice | mitochondrion, nucleus | 35.05 | 28.86 |
| Os01t0625300-01 | Rice | nucleus | 28.7 | 28.02 |
| Os03t0224700-01 | Rice | nucleus | 29.31 | 23.66 |
| Os03t0854500-01 | Rice | nucleus | 35.35 | 23.12 |
| Os02t0496100-01 | Rice | nucleus | 32.33 | 22.53 |
| Os05t0530400-01 | Rice | nucleus | 29.91 | 21.57 |
| Os01t0749300-02 | Rice | nucleus | 28.4 | 21.36 |
| Os02t0527300-01 | Rice | nucleus | 31.72 | 21.08 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | ProteinID:BAD54487.1 | ProteinID:BAF19803.1 | ProteinID:BAS98278.1 | ncoils:Coil |
| ProteinID:EAZ37390.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | EnsemblPlantsGene:Os06g0565200 | EnsemblPlants:Os06t0565200-00 |
| PFAM:PF00447 | PRINTS:PR00056 | ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF259 | UniProt:Q5Z6A4 |
| SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI000044704E | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg |
Description
HEAT STRESS TRANSCRIPTION FACTOR A6Putative heat stress transcription factor A-6a. (Os06t0565200-00)
Coordinates
chr6:+:21761304..21762421
Molecular Weight (calculated)
36105.3 Da
IEP (calculated)
4.636
GRAVY (calculated)
-0.348
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYSTVKQEE VEVVVLDGEE EAAAAAAPVP LPAAMGVGAA VAPFLVKTFE MVEDPATDAV VSWGGAARNS FVVWDPHAFA AGLLPLHFKH ANFSSFLRQL
101: NTYGFRKVSA DRWEFANEDF LGGQRHLLAN IRRRRRGAGT GSTTPRAVNC GGGGGEGEVE RLRRDKEALA RELARLRRQQ QEARAQLLDM ERRVRGTERR
201: QEQCTEFLAR ALRSPDVLDN IARRHAAAVE RKKRRMLAAA ADDDGLTFEA LALAAAADTS HSTGGAVTTD MIWYELLGEE QAEIDIEVDQ LVASASAAAD
301: TASEAEPWEE MGEEEVQELV QQIDCLASPS S
101: NTYGFRKVSA DRWEFANEDF LGGQRHLLAN IRRRRRGAGT GSTTPRAVNC GGGGGEGEVE RLRRDKEALA RELARLRRQQ QEARAQLLDM ERRVRGTERR
201: QEQCTEFLAR ALRSPDVLDN IARRHAAAVE RKKRRMLAAA ADDDGLTFEA LALAAAADTS HSTGGAVTTD MIWYELLGEE QAEIDIEVDQ LVASASAAAD
301: TASEAEPWEE MGEEEVQELV QQIDCLASPS S
001: MDVSKVTTSD GGGDSMETKP SPQPQPAAIL SSNAPPPFLS KTYDMVDDHN TDSIVSWSAN NNSFIVWKPP EFARDLLPKN FKHNNFSSFV RQLNTYGFRK
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SRQNP
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SRQNP
Arabidopsis Description
HSFA1DHeat stress transcription factor A-1d [Source:UniProtKB/Swiss-Prot;Acc:Q9LQM7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.