CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH05436
KRH08858
KRH15573
KRH38373
KRH61515

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26150.1	KRH05436	AT2G26150.1	21510947
AT2G26150.1	KRH15573	AT2G26150.1	21510947
AT2G26150.1	KRH61515	AT2G26150.1	21510947
AT2G26150.1	KRH08858	AT5G52640.1	19366428
AT2G26150.1	KRH38373	AT5G52640.1	19366428

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05436	Soybean	nucleus	85.71	87.89
KRH61515	Soybean	nucleus	65.11	63.71
VIT_04s0008g01110.t01	Wine grape	nucleus	62.36	58.51
CDY21503	Canola	nucleus	53.85	56.16
AT2G26150.1	Thale cress	nucleus	52.47	55.36
Bra000557.1-P	Field mustard	nucleus	52.75	55.17
PGSC0003DMT400021234	Potato	nucleus	51.92	53.54
CDX83217	Canola	nucleus	52.75	51.47
GSMUA_Achr6P00960_001	Banana	nucleus	44.23	51.44
GSMUA_Achr2P16660_001	Banana	nucleus	37.36	49.82
KRH31657	Soybean	nucleus	39.56	42.73
KRG91367	Soybean	nucleus	40.11	39.89
KRG95588	Soybean	nucleus	40.38	39.73
Os06t0565200-00	Rice	nucleus	35.99	39.58
KRH32059	Soybean	nucleus	36.81	39.3
KRH35452	Soybean	nucleus	39.29	39.07
TraesCS7B01G267300.1	Wheat	nucleus	37.09	38.24
KRH67266	Soybean	nucleus	40.11	37.82
TraesCS7A01G360400.1	Wheat	nucleus	36.54	37.15
Zm00001d046204_P001	Maize	nucleus	37.09	36.99
HORVU7Hr1G087690.1	Barley	nucleus	35.44	35.34
KRH02689	Soybean	nucleus	36.26	32.67
KRH19208	Soybean	nucleus	35.99	32.11
KXG20211	Sorghum	nucleus	35.99	31.41
KRH77766	Soybean	nucleus	38.46	30.17
KRH39283	Soybean	nucleus	26.37	30.0
KRH74387	Soybean	nucleus	40.38	30.0
KRH39566	Soybean	nucleus	40.38	29.4
KRH27709	Soybean	nucleus	37.36	29.31
KRH07474	Soybean	nucleus	40.66	29.02
EES00942	Sorghum	plastid	31.04	28.68
Os01t0571300-01	Rice	mitochondrion, nucleus	31.32	28.36
KRH59030	Soybean	nucleus	29.67	26.87
KRH21206	Soybean	nucleus	28.85	26.79
KRH42919	Soybean	nucleus	29.12	26.37
KRH11063	Soybean	nucleus	28.02	26.02
KRH67848	Soybean	nucleus	28.85	24.82
Zm00001d044259_P001	Maize	plastid	25.55	24.67
KRH20029	Soybean	nucleus	29.95	24.01
KRH32651	Soybean	nucleus	29.12	23.04
KRH42748	Soybean	nucleus	29.12	22.22
KRH58845	Soybean	nucleus	29.12	22.13

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	EMBL:ACUP02008614	ncoils:Coil	EnsemblPlantsGene:GLYMA_14G096800	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam	UniProt:I1M939
InterPro:IPR036388	ProteinID:KRH15572.1	EnsemblPlants:KRH15573	ProteinID:KRH15573	ProteinID:KRH15573.1	ProteinID:KRH15574.1
PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF186	SMART:SM00415
SUPFAM:SSF46785	UniParc:UPI000233B9B8	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg	:

Description

hypothetical protein

Coordinates

chr14:+:9106492..9110187

Molecular Weight (calculated)

41348.3 Da

IEP (calculated)

4.527

GRAVY (calculated)

-0.631

Length

364 amino acids

Sequence
(BLAST)

001: MYMERIRVKE EEAVTCGGGS SSSSSSSSSF SPQPMEGLHE VGPPPFLSKI FDMVEDSSTD SIVSWSMARN SFVVWDSHKF SADILPRYFK HGNFSSFIRQ
101: LNAYGFRKVD PDRWEFANEG FLAGQRHLLK TIKRRRNVSQ SLQQKGGSGA CVEVGEFGLE GELERLKRDR NILMAEIVRL RHQQLNSREQ LNSMETRLQA
201: TEKKQQQMMS FLAKALSNPS FTKQLVQKTP QSREVLGVEI NRKRRLTASP SVENLQQDDQ DLATLDYPSH DRDLATMETD MDTFFSPAYD NELSSETNEP
301: ASISVEDTIL EDFLNKDLVT WNPEDEVIIG DSSQVDVPVE DLVANPDDWS EQLQDLVDHM DYLG

Best Arabidopsis Sequence Match ( AT2G26150.4 )
(BLAST)

001: MEELKVEMEE ETVTFTGSVA ASSSVGSSSS PRPMEGLNET GPPPFLTKTY EMVEDPATDT VVSWSNGRNS FVVWDSHKFS TTLLPRYFKH SNFSSFIRQL
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP

Arabidopsis Description

HSFA2Heat stress transcription factor A-2 [Source:UniProtKB/Swiss-Prot;Acc:O80982]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.