Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G26150.1 | KRH05436 | AT2G26150.1 | 21510947 |
| AT2G26150.1 | KRH15573 | AT2G26150.1 | 21510947 |
| AT2G26150.1 | KRH61515 | AT2G26150.1 | 21510947 |
| AT2G26150.1 | KRH08858 | AT5G52640.1 | 19366428 |
| AT2G26150.1 | KRH38373 | AT5G52640.1 | 19366428 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH15573 | Soybean | nucleus | 87.89 | 85.71 |
| KRH61515 | Soybean | nucleus | 65.35 | 62.37 |
| VIT_04s0008g01110.t01 | Wine grape | nucleus | 62.54 | 57.22 |
| CDY21503 | Canola | nucleus | 54.08 | 55.01 |
| AT2G26150.1 | Thale cress | nucleus | 53.24 | 54.78 |
| Bra000557.1-P | Field mustard | nucleus | 52.96 | 54.02 |
| PGSC0003DMT400021234 | Potato | nucleus | 52.68 | 52.97 |
| GSMUA_Achr6P00960_001 | Banana | nucleus | 45.35 | 51.44 |
| GSMUA_Achr2P16660_001 | Banana | nucleus | 39.15 | 50.92 |
| CDX83217 | Canola | nucleus | 52.96 | 50.4 |
| KRH31657 | Soybean | nucleus | 40.85 | 43.03 |
| Os06t0565200-00 | Rice | nucleus | 37.46 | 40.18 |
| KRG91367 | Soybean | nucleus | 41.13 | 39.89 |
| KRG95588 | Soybean | nucleus | 41.41 | 39.73 |
| KRH35452 | Soybean | nucleus | 40.85 | 39.62 |
| KRH32059 | Soybean | nucleus | 37.75 | 39.3 |
| TraesCS7B01G267300.1 | Wheat | nucleus | 38.31 | 38.53 |
| KRH67266 | Soybean | nucleus | 40.85 | 37.56 |
| TraesCS7A01G360400.1 | Wheat | nucleus | 37.75 | 37.43 |
| Zm00001d046204_P001 | Maize | nucleus | 38.31 | 37.26 |
| HORVU7Hr1G087690.1 | Barley | nucleus | 37.18 | 36.16 |
| KRH02689 | Soybean | nucleus | 37.75 | 33.17 |
| KRH19208 | Soybean | nucleus | 37.75 | 32.84 |
| KXG20211 | Sorghum | nucleus | 37.18 | 31.65 |
| KRH39283 | Soybean | nucleus | 26.48 | 29.38 |
| EES00942 | Sorghum | plastid | 32.39 | 29.19 |
| Os01t0571300-01 | Rice | mitochondrion, nucleus | 32.96 | 29.1 |
| KRH74387 | Soybean | nucleus | 39.72 | 28.78 |
| KRH77766 | Soybean | nucleus | 37.46 | 28.66 |
| KRH39566 | Soybean | nucleus | 39.72 | 28.2 |
| KRH07474 | Soybean | nucleus | 40.0 | 27.84 |
| KRH27709 | Soybean | nucleus | 36.34 | 27.8 |
| KRH21206 | Soybean | nucleus | 29.86 | 27.04 |
| KRH59030 | Soybean | nucleus | 29.86 | 26.37 |
| KRH11063 | Soybean | nucleus | 29.01 | 26.28 |
| KRH42919 | Soybean | nucleus | 29.58 | 26.12 |
| Zm00001d044259_P001 | Maize | plastid | 26.76 | 25.2 |
| KRH67848 | Soybean | nucleus | 29.86 | 25.06 |
| KRH20029 | Soybean | nucleus | 31.55 | 24.67 |
| KRH32651 | Soybean | nucleus | 30.99 | 23.91 |
| KRH58845 | Soybean | nucleus | 29.3 | 21.71 |
| KRH42748 | Soybean | nucleus | 29.01 | 21.59 |
Protein Annotations
| Gene3D:1.10.10.10 | EntrezGene:100820298 | MapMan:15.5.13 | EMBL:ACUP02010745 | ncoils:Coil | EnsemblPlantsGene:GLYMA_17G227600 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HSF_DNA-bd | InterPro:HSF_fam |
| InterPro:IPR036388 | UniProt:K7MNF6 | EnsemblPlants:KRH05436 | ProteinID:KRH05436 | ProteinID:KRH05436.1 | ProteinID:KRH05437.1 |
| PFAM:PF00447 | PRINTS:PR00056 | ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF186 | SMART:SM00415 |
| SUPFAM:SSF46785 | UniParc:UPI000233E3A7 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr17:-:38237933..38241566
Molecular Weight (calculated)
40320.8 Da
IEP (calculated)
4.840
GRAVY (calculated)
-0.553
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MCMERIRVKE EEAMTCGGGG SSSSSFISPQ AQPMEGLHEV GPPPFLSKIF DMVEDPSTDS IVSWSMARNS FVVWDSHKFS AHILPRYFKH ANFSSFIRQL
101: NTYGFRKVDP DKWEFANEGF LAGQRHLLKT IKRRRNVSHS NQQKGGSGAC VEVGKFGLEG ELERLKRDRN ILMAEIVRLR HQQLNSRDQL SAMEARMQAT
201: EKKQQQMMSF LAKALSNPSF MQQLVHKTPQ SREVLLGVEI NRKRRLPACP SVENLQQDNQ DLATMETDMD TFFAPAYDNE FGNEIDEPAS ILVEDSILED
301: FLNKDLITGN PEDEVIIGDC TQVDVPMEDL VANPDDWSEQ LQDLVDHMDY LGSKP
101: NTYGFRKVDP DKWEFANEGF LAGQRHLLKT IKRRRNVSHS NQQKGGSGAC VEVGKFGLEG ELERLKRDRN ILMAEIVRLR HQQLNSRDQL SAMEARMQAT
201: EKKQQQMMSF LAKALSNPSF MQQLVHKTPQ SREVLLGVEI NRKRRLPACP SVENLQQDNQ DLATMETDMD TFFAPAYDNE FGNEIDEPAS ILVEDSILED
301: FLNKDLITGN PEDEVIIGDC TQVDVPMEDL VANPDDWSEQ LQDLVDHMDY LGSKP
001: MEELKVEMEE ETVTFTGSVA ASSSVGSSSS PRPMEGLNET GPPPFLTKTY EMVEDPATDT VVSWSNGRNS FVVWDSHKFS TTLLPRYFKH SNFSSFIRQL
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
Arabidopsis Description
HSFA2Heat stress transcription factor A-2 [Source:UniProtKB/Swiss-Prot;Acc:O80982]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.