Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH67266 | Soybean | nucleus | 91.89 | 88.08 |
| VIT_00s0179g00150.t01 | Wine grape | nucleus | 65.41 | 67.04 |
| KRH32059 | Soybean | nucleus | 55.14 | 59.82 |
| PGSC0003DMT400049793 | Potato | nucleus | 58.65 | 59.62 |
| Solyc09g065660.2.1 | Tomato | nucleus | 59.73 | 59.41 |
| Bra012829.1-P | Field mustard | nucleus | 39.73 | 59.27 |
| CDX95313 | Canola | nucleus | 42.7 | 58.96 |
| PGSC0003DMT400049795 | Potato | nucleus | 57.3 | 58.89 |
| CDX90626 | Canola | nucleus | 42.16 | 57.99 |
| AT3G51910.1 | Thale cress | nucleus | 42.43 | 57.72 |
| Bra012828.1-P | Field mustard | nucleus | 41.89 | 57.62 |
| CDY29054 | Canola | nucleus | 41.08 | 57.36 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 43.51 | 55.52 |
| KRG91367 | Soybean | nucleus | 54.59 | 55.19 |
| CDX90627 | Canola | nucleus | 42.16 | 54.36 |
| KRH31657 | Soybean | nucleus | 49.19 | 54.01 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 43.51 | 52.27 |
| Os10t0419300-00 | Rice | nucleus | 49.73 | 51.4 |
| KRH35452 | Soybean | nucleus | 50.81 | 51.37 |
| Zm00001d032923_P002 | Maize | nucleus | 49.46 | 51.26 |
| CDY11470 | Canola | nucleus | 39.19 | 50.88 |
| Bra007739.1-P | Field mustard | nucleus | 39.19 | 50.88 |
| EER94213 | Sorghum | nucleus | 49.73 | 50.83 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 45.68 | 50.75 |
| EER93298 | Sorghum | nucleus | 46.49 | 50.74 |
| CDX76693 | Canola | nucleus | 38.65 | 50.18 |
| AT3G63350.1 | Thale cress | nucleus | 38.11 | 50.0 |
| TraesCS4D01G276500.1 | Wheat | nucleus | 45.41 | 49.27 |
| HORVU1Hr1G083420.2 | Barley | nucleus | 49.46 | 49.19 |
| TraesCS4B01G278100.1 | Wheat | nucleus | 45.14 | 48.97 |
| TraesCS5A01G437900.1 | Wheat | nucleus | 45.68 | 48.84 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 44.05 | 48.8 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 44.86 | 48.68 |
| TraesCS5D01G445100.1 | Wheat | nucleus | 45.68 | 48.56 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 45.14 | 48.55 |
| TraesCS5B01G440700.1 | Wheat | nucleus | 46.22 | 48.44 |
| TraesCS1A01G375600.2 | Wheat | nucleus | 47.57 | 47.83 |
| TraesCS1B01G396000.1 | Wheat | nucleus | 46.22 | 47.77 |
| Os07t0178600-01 | Rice | nucleus | 47.84 | 47.58 |
| EER95940 | Sorghum | nucleus | 47.57 | 47.31 |
| TraesCS1D01G382900.1 | Wheat | nucleus | 46.49 | 47.25 |
| Zm00001d018941_P001 | Maize | nucleus | 47.3 | 46.67 |
| Os03t0161900-02 | Rice | nucleus | 47.03 | 45.91 |
| Zm00001d027757_P001 | Maize | nucleus | 47.57 | 45.83 |
| EER95463 | Sorghum | nucleus | 48.11 | 45.52 |
| TraesCS2B01G105100.1 | Wheat | nucleus | 48.38 | 44.2 |
| HORVU2Hr1G014590.1 | Barley | nucleus | 49.19 | 43.54 |
| TraesCS2A01G089300.1 | Wheat | nucleus | 48.38 | 43.34 |
| TraesCS2D01G087400.1 | Wheat | nucleus | 47.84 | 42.96 |
| EER90889 | Sorghum | nucleus | 42.97 | 42.86 |
| KRH61515 | Soybean | nucleus | 42.43 | 42.2 |
| Zm00001d033987_P001 | Maize | nucleus | 42.16 | 42.05 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 42.16 | 42.05 |
| TraesCS5D01G393200.1 | Wheat | nucleus | 42.43 | 41.64 |
| KRH05436 | Soybean | nucleus | 39.73 | 41.41 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 41.08 | 40.86 |
| TraesCS3A01G405200.1 | Wheat | nucleus | 43.78 | 40.81 |
| KRH15573 | Soybean | nucleus | 39.73 | 40.38 |
| TraesCS3B01G438900.1 | Wheat | nucleus | 43.24 | 36.95 |
| HORVU5Hr1G105770.2 | Barley | nucleus | 47.3 | 33.59 |
| KRH39283 | Soybean | nucleus | 28.65 | 33.12 |
| KRH74387 | Soybean | nucleus | 41.08 | 31.02 |
| KRH39566 | Soybean | nucleus | 41.35 | 30.6 |
| KRH07474 | Soybean | nucleus | 41.89 | 30.39 |
| KRH02689 | Soybean | nucleus | 32.43 | 29.7 |
| KRH19208 | Soybean | nucleus | 32.16 | 29.17 |
| KRH11063 | Soybean | nucleus | 30.54 | 28.83 |
| KRH21206 | Soybean | nucleus | 30.54 | 28.83 |
| KRH77766 | Soybean | nucleus | 35.68 | 28.45 |
| KRH27709 | Soybean | nucleus | 35.41 | 28.23 |
| Zm00001d034433_P003 | Maize | nucleus | 46.49 | 27.7 |
| KRH59030 | Soybean | nucleus | 29.73 | 27.36 |
| KRH67848 | Soybean | nucleus | 30.81 | 26.95 |
| KRH42919 | Soybean | nucleus | 28.92 | 26.62 |
| KRH32651 | Soybean | nucleus | 31.62 | 25.43 |
| KRH20029 | Soybean | nucleus | 31.08 | 25.33 |
| KRH58845 | Soybean | nucleus | 30.81 | 23.8 |
| KRH42748 | Soybean | nucleus | 29.73 | 23.06 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | EMBL:ACUP02012119 | ncoils:Coil | EnsemblPlantsGene:GLYMA_19G159500 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | UniProt:I1N9K5 |
| InterPro:IPR036388 | EnsemblPlants:KRG95588 | ProteinID:KRG95588 | ProteinID:KRG95588.1 | ProteinID:KRG95589.1 | PFAM:PF00447 |
| PRINTS:PR00056 | ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF260 | SMART:SM00415 | SUPFAM:SSF46785 |
| UniParc:UPI000233EE9E | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr19:+:42029177..42032240
Molecular Weight (calculated)
42389.8 Da
IEP (calculated)
5.274
GRAVY (calculated)
-0.848
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MNYLYPVKEE YLESPPPSSS SPTTGVDESA MVPPPRPMEG LHEIGPPPFL TKTYDAVEDP TTSHIVSWNR GGASFVVWDP HAFSRDLLPR YFKHNNFSSF
101: VRQLNTYGFR KIDPDRWEFA NEGFLRGHRH QLASIRRRKQ PSRPYSSSSS SQQAQGHCVE VGRFGLDEEV DRLRRDKHVL MMELVRLRQQ QLNTRSYLQA
201: MEERLRGTEI KQQQMMAFLA RALKNPTFIQ QLLQQKEKRK ELEEAMSKKR RRPIEGGPSG VGEPSSGGEE GRSSVKVEPL VLGEYGFGVS ELEVLAMEMQ
301: GYGRGRREQE EEPEALESQE RLEKELDEGF WEELFSEGFE GELDIPTSQD QDEDVSVLAN RFGYLGSSPK
101: VRQLNTYGFR KIDPDRWEFA NEGFLRGHRH QLASIRRRKQ PSRPYSSSSS SQQAQGHCVE VGRFGLDEEV DRLRRDKHVL MMELVRLRQQ QLNTRSYLQA
201: MEERLRGTEI KQQQMMAFLA RALKNPTFIQ QLLQQKEKRK ELEEAMSKKR RRPIEGGPSG VGEPSSGGEE GRSSVKVEPL VLGEYGFGVS ELEVLAMEMQ
301: GYGRGRREQE EEPEALESQE RLEKELDEGF WEELFSEGFE GELDIPTSQD QDEDVSVLAN RFGYLGSSPK
001: MDPSFRFIKE EFPAGFSDSP SPPSSSSYLY SSSMAEAAIN DPTTLSYPQP LEGLHESGPP PFLTKTYDLV EDSRTNHVVS WSKSNNSFIV WDPQAFSVTL
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN
Arabidopsis Description
HSFA6BHeat stress transcription factor A-6b [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.