Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G089300.1 | Wheat | nucleus | 97.33 | 97.09 |
| TraesCS2B01G105100.1 | Wheat | nucleus | 89.81 | 91.36 |
| HORVU2Hr1G014590.1 | Barley | nucleus | 90.78 | 89.47 |
| Os07t0178600-01 | Rice | nucleus | 64.81 | 71.77 |
| EER95940 | Sorghum | nucleus | 63.84 | 70.7 |
| Zm00001d018941_P001 | Maize | nucleus | 64.08 | 70.4 |
| TraesCS5D01G445100.1 | Wheat | nucleus | 51.7 | 61.21 |
| Solyc06g053960.2.1 | Tomato | nucleus | 20.39 | 59.15 |
| AT3G51910.1 | Thale cress | nucleus | 33.74 | 51.1 |
| TraesCS1D01G382900.1 | Wheat | nucleus | 43.93 | 49.73 |
| CDX95313 | Canola | nucleus | 32.28 | 49.63 |
| TraesCS4D01G276500.1 | Wheat | nucleus | 40.53 | 48.97 |
| VIT_00s0179g00150.t01 | Wine grape | nucleus | 42.48 | 48.48 |
| KRH31657 | Soybean | nucleus | 39.56 | 48.37 |
| Bra012829.1-P | Field mustard | nucleus | 28.88 | 47.98 |
| KRG95588 | Soybean | nucleus | 42.96 | 47.84 |
| KRG91367 | Soybean | nucleus | 42.23 | 47.54 |
| CDY29054 | Canola | nucleus | 30.1 | 46.79 |
| Bra012828.1-P | Field mustard | nucleus | 30.34 | 46.47 |
| CDX90626 | Canola | nucleus | 30.34 | 46.47 |
| KRH32059 | Soybean | nucleus | 38.35 | 46.33 |
| KRH67266 | Soybean | nucleus | 43.2 | 46.11 |
| Solyc09g082670.2.1 | Tomato | nucleus | 39.56 | 45.79 |
| KRH35452 | Soybean | nucleus | 40.53 | 45.63 |
| TraesCS5D01G393200.1 | Wheat | nucleus | 41.5 | 45.36 |
| CDX94887 | Canola | nucleus | 29.61 | 45.19 |
| PGSC0003DMT400049793 | Potato | nucleus | 39.81 | 45.05 |
| Solyc09g065660.2.1 | Tomato | nucleus | 40.29 | 44.62 |
| VIT_05s0020g04090.t01 | Wine grape | nucleus | 38.11 | 44.6 |
| CDX90627 | Canola | nucleus | 30.83 | 44.25 |
| CDY10674 | Canola | nucleus | 41.75 | 44.22 |
| PGSC0003DMT400016511 | Potato | nucleus | 38.84 | 44.2 |
| PGSC0003DMT400049795 | Potato | nucleus | 38.35 | 43.89 |
| CDY34229 | Canola | nucleus | 40.05 | 43.54 |
| CDY10311 | Canola | nucleus | 40.05 | 42.53 |
| Bra033913.1-P | Field mustard | nucleus | 41.99 | 42.51 |
| PGSC0003DMT400041944 | Potato | nucleus | 35.44 | 42.44 |
| CDY46606 | Canola | nucleus | 39.32 | 42.3 |
| Bra023800.1-P | Field mustard | nucleus | 40.29 | 41.71 |
| CDY46607 | Canola | nucleus | 37.38 | 41.51 |
| AT3G22830.1 | Thale cress | nucleus | 40.78 | 41.38 |
| AT3G63350.1 | Thale cress | nucleus | 28.16 | 41.13 |
| CDX94884 | Canola | nucleus | 28.64 | 41.12 |
| CDY14893 | Canola | nucleus | 25.73 | 40.46 |
| Bra001885.1-P | Field mustard | nucleus | 38.35 | 40.41 |
| AT5G43840.1 | Thale cress | nucleus | 27.43 | 40.07 |
| Bra007739.1-P | Field mustard | nucleus | 27.67 | 40.0 |
| CDY11470 | Canola | nucleus | 27.67 | 40.0 |
| CDX76693 | Canola | nucleus | 27.18 | 39.3 |
| Bra035993.1-P | Field mustard | nucleus | 26.21 | 38.43 |
| CDX92958 | Canola | nucleus | 32.04 | 38.37 |
| TraesCS7D01G367700.1 | Wheat | nucleus | 23.54 | 36.6 |
| TraesCS3D01G280600.1 | Wheat | nucleus | 20.63 | 35.27 |
| TraesCS4D01G358900.1 | Wheat | nucleus | 23.54 | 35.14 |
| TraesCS3D01G385900.1 | Wheat | nucleus | 23.06 | 31.05 |
| TraesCS4D01G239600.1 | Wheat | nucleus | 28.88 | 30.99 |
| TraesCS3D01G386000.1 | Wheat | nucleus | 23.06 | 30.25 |
| TraesCS3D01G227200.1 | Wheat | nucleus | 23.3 | 29.91 |
| TraesCS5D01G553300.1 | Wheat | nucleus | 37.14 | 29.31 |
| TraesCS6D01G083800.1 | Wheat | nucleus | 30.1 | 27.07 |
| TraesCS2D01G211400.1 | Wheat | nucleus | 31.55 | 26.05 |
| TraesCS3D01G289000.1 | Wheat | nucleus | 23.3 | 23.08 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 |
| ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF139 | SMART:SM00415 | SUPFAM:SSF46785 | EnsemblPlantsGene:TraesCS2D01G087400 |
| EnsemblPlants:TraesCS2D01G087400.1 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | : | : | : |
Description
No Description!
Coordinates
chr2D:+:37608958..37613873
Molecular Weight (calculated)
45433.5 Da
IEP (calculated)
4.609
GRAVY (calculated)
-0.527
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPVPSLVKE EEEEGAHGTG DSPAVGAAPR PMEGLHDAGP PPFLTKTYDM VDDPNTDSIM SWSAGNNSFV VWDPHAFATV LLPRQFKHSN FSSFVRQLNT
101: YGFRKVDPDR WEFANEGFLR GQRHLLKNIR RRKPPAHTAS NQQSLGSYLE VGHFGYDAEI DRLKRDKQLL MAEVVKLRQE QQNTKARLKA MEDRLCGTEQ
201: KQQQMTSFMA RILRNPEFLK QLIAKNGMRK ELHDAISKKR RRRIDGGPEA YAMGASSSSL DQELPVVFDS HGSVELLAEG SVPVELLSDG IPPDLEGSVD
301: LLGDEIPPGL EGSVALLADG LEGSVELLVD GIPSDLDAGI DSNGVTEPQD YGLGTCEAQQ NRAPGLFHDN FWEELLNKGL SVENDEPVNV DGMDVLSEKM
401: GYLIPNSPTL ST
101: YGFRKVDPDR WEFANEGFLR GQRHLLKNIR RRKPPAHTAS NQQSLGSYLE VGHFGYDAEI DRLKRDKQLL MAEVVKLRQE QQNTKARLKA MEDRLCGTEQ
201: KQQQMTSFMA RILRNPEFLK QLIAKNGMRK ELHDAISKKR RRRIDGGPEA YAMGASSSSL DQELPVVFDS HGSVELLAEG SVPVELLSDG IPPDLEGSVD
301: LLGDEIPPGL EGSVALLADG LEGSVELLVD GIPSDLDAGI DSNGVTEPQD YGLGTCEAQQ NRAPGLFHDN FWEELLNKGL SVENDEPVNV DGMDVLSEKM
401: GYLIPNSPTL ST
001: MEELKVEMEE ETVTFTGSVA ASSSVGSSSS PRPMEGLNET GPPPFLTKTY EMVEDPATDT VVSWSNGRNS FVVWDSHKFS TTLLPRYFKH SNFSSFIRQL
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
Arabidopsis Description
HSFA2Heat stress transcription factor A-2 [Source:UniProtKB/Swiss-Prot;Acc:O80982]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.