Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023800.1-P | Field mustard | nucleus | 96.34 | 92.71 |
| CDY34229 | Canola | nucleus | 91.64 | 92.61 |
| CDY46607 | Canola | nucleus | 87.99 | 90.84 |
| CDX94887 | Canola | nucleus | 56.66 | 80.37 |
| CDY10674 | Canola | nucleus | 79.63 | 78.41 |
| CDY10311 | Canola | nucleus | 78.59 | 77.58 |
| AT3G22830.1 | Thale cress | nucleus | 79.63 | 75.12 |
| CDX94884 | Canola | nucleus | 55.87 | 74.56 |
| CDX92958 | Canola | nucleus | 66.06 | 73.55 |
| Solyc06g053960.2.1 | Tomato | nucleus | 23.5 | 63.38 |
| KRG91367 | Soybean | nucleus | 52.22 | 54.64 |
| KRH31657 | Soybean | nucleus | 47.26 | 53.71 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 39.69 | 52.41 |
| Solyc09g082670.2.1 | Tomato | nucleus | 48.04 | 51.69 |
| KRH35452 | Soybean | nucleus | 49.35 | 51.64 |
| PGSC0003DMT400016511 | Potato | nucleus | 48.56 | 51.38 |
| PGSC0003DMT400041944 | Potato | nucleus | 44.91 | 50.0 |
| CDX95313 | Canola | nucleus | 34.73 | 49.63 |
| CDX90626 | Canola | nucleus | 33.94 | 48.33 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 42.04 | 48.2 |
| Os10t0419300-00 | Rice | nucleus | 44.91 | 48.04 |
| CDY29054 | Canola | nucleus | 32.9 | 47.55 |
| Zm00001d032923_P002 | Maize | nucleus | 44.13 | 47.34 |
| EER94213 | Sorghum | nucleus | 43.86 | 46.41 |
| TraesCS4D01G276500.1 | Wheat | nucleus | 41.25 | 46.33 |
| VIT_05s0020g04090.t01 | Wine grape | nucleus | 42.56 | 46.31 |
| TraesCS4B01G278100.1 | Wheat | nucleus | 40.99 | 46.04 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 36.55 | 45.45 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 40.47 | 45.45 |
| CDX90627 | Canola | nucleus | 33.94 | 45.3 |
| EER93298 | Sorghum | nucleus | 39.43 | 44.54 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 39.95 | 44.48 |
| EER95940 | Sorghum | nucleus | 43.08 | 44.35 |
| HORVU1Hr1G083420.2 | Barley | nucleus | 43.08 | 44.35 |
| Os03t0161900-02 | Rice | nucleus | 43.34 | 43.8 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 37.86 | 43.54 |
| CDY14893 | Canola | nucleus | 29.77 | 43.51 |
| TraesCS1A01G375600.2 | Wheat | nucleus | 41.78 | 43.48 |
| Zm00001d018941_P001 | Maize | nucleus | 42.56 | 43.47 |
| TraesCS1B01G396000.1 | Wheat | nucleus | 40.21 | 43.02 |
| TraesCS1D01G382900.1 | Wheat | nucleus | 40.73 | 42.86 |
| TraesCS5A01G437900.1 | Wheat | nucleus | 38.64 | 42.77 |
| Os07t0178600-01 | Rice | nucleus | 41.51 | 42.74 |
| TraesCS5D01G445100.1 | Wheat | nucleus | 38.64 | 42.53 |
| EER95463 | Sorghum | nucleus | 42.56 | 41.69 |
| TraesCS5B01G440700.1 | Wheat | nucleus | 38.38 | 41.64 |
| Zm00001d027757_P001 | Maize | nucleus | 41.51 | 41.41 |
| CDX76693 | Canola | nucleus | 30.55 | 41.05 |
| CDY11470 | Canola | nucleus | 30.29 | 40.7 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 38.12 | 39.35 |
| TraesCS2D01G087400.1 | Wheat | nucleus | 42.3 | 39.32 |
| TraesCS2B01G105100.1 | Wheat | nucleus | 41.51 | 39.26 |
| HORVU2Hr1G014590.1 | Barley | nucleus | 42.56 | 39.0 |
| TraesCS2A01G089300.1 | Wheat | nucleus | 42.04 | 38.98 |
| TraesCS5D01G393200.1 | Wheat | nucleus | 37.86 | 38.46 |
| CDY21503 | Canola | nucleus | 34.99 | 38.4 |
| CDY43158 | Canola | nucleus | 30.55 | 38.24 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 37.08 | 38.17 |
| Zm00001d033987_P001 | Maize | nucleus | 36.81 | 38.01 |
| EER90889 | Sorghum | nucleus | 36.55 | 37.74 |
| TraesCS3A01G405200.1 | Wheat | nucleus | 37.86 | 36.52 |
| CDX83217 | Canola | nucleus | 35.25 | 36.19 |
| TraesCS3B01G438900.1 | Wheat | nucleus | 37.6 | 33.26 |
| CDX78797 | Canola | nucleus | 36.81 | 32.79 |
| CDY60785 | Canola | nucleus | 36.81 | 32.27 |
| CDY38085 | Canola | nucleus | 34.2 | 29.84 |
| CDX85486 | Canola | nucleus | 34.2 | 29.64 |
| HORVU5Hr1G105770.2 | Barley | nucleus | 39.69 | 29.17 |
| CDX93024 | Canola | nucleus | 23.24 | 29.09 |
| CDY09259 | Canola | nucleus | 27.42 | 29.01 |
| CDY13041 | Canola | nucleus | 23.24 | 28.99 |
| CDX77420 | Canola | nucleus | 23.76 | 28.98 |
| CDY50608 | Canola | nucleus | 23.76 | 28.89 |
| CDX76506 | Canola | nucleus | 27.42 | 28.69 |
| CDY39545 | Canola | nucleus | 23.5 | 28.66 |
| CDY58547 | Canola | nucleus | 33.68 | 28.41 |
| CDX92026 | Canola | nucleus | 32.64 | 27.9 |
| CDX93842 | Canola | nucleus | 34.99 | 27.52 |
| CDX74228 | Canola | nucleus | 32.64 | 27.47 |
| CDY01288 | Canola | nucleus | 35.25 | 27.44 |
| CDY23108 | Canola | nucleus | 24.28 | 27.35 |
| CDY16977 | Canola | nucleus | 31.33 | 27.21 |
| CDY69818 | Canola | nucleus | 27.68 | 27.18 |
| CDX99415 | Canola | nucleus | 27.15 | 27.08 |
| CDY28731 | Canola | nucleus | 30.81 | 27.06 |
| CDY01562 | Canola | nucleus | 27.68 | 26.97 |
| CDX69418 | Canola | nucleus | 33.94 | 26.69 |
| CDX70290 | Canola | nucleus | 25.07 | 26.45 |
| CDY10361 | Canola | nucleus | 27.15 | 25.94 |
| Zm00001d034433_P003 | Maize | nucleus | 39.69 | 24.48 |
| CDY44649 | Canola | nucleus | 28.72 | 23.16 |
| CDY12723 | Canola | nucleus | 27.68 | 22.32 |
| CDY01180 | Canola | nucleus | 27.15 | 21.8 |
| CDX78902 | Canola | nucleus | 26.11 | 19.34 |
| CDY43157 | Canola | cytosol | 2.35 | 10.0 |
| CDX84097 | Canola | nucleus | 6.53 | 9.29 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | GO:A0A078I9U8 | UniProt:A0A078I9U8 | EnsemblPlants:CDY46606 | ProteinID:CDY46606 |
| ProteinID:CDY46606.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00085879001 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 |
| ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF139 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0004EE52D0 |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : |
Description
BnaCnng14280DBnaCnng14280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I9U8]
Coordinates
chrLK032678:+:144111..145989
Molecular Weight (calculated)
44136.5 Da
IEP (calculated)
4.910
GRAVY (calculated)
-0.924
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPSYRFIKE EFPRGFNDSP SPPSSSTSSY LHSTSMAPND PATLNSPQPI EGLHESGPPP FLTKTYDLVE DSRTNHVVSW SQANNSFIVW DQEYFSMTLL
101: PIFFKHNNLS SFVRQLNTYG FRKVNPDRWE FANEGFLRGQ KHLLKTIRRR KTNNCCIEVG KYGLDGEMDS LRRDKQVLMM ELVKVRQQQQ STKMDLTLLE
201: DKLKKTESKQ KQMMSFLARA MQNPDFLQQL IEQKEKRKNT EEAIDKKRQR PIDQGKRHVV CVEDYDDGGG GYGRYGKDAG SSSAFFDMKQ ETYGDMSELD
301: RLAMHIQGLG DQCNKEDVVL DVGKGNEEEQ HKERYQDENN EIYGEGFWED LLNEGQNFDL QGDDEENVDV LIEQLGYLGS SGH
101: PIFFKHNNLS SFVRQLNTYG FRKVNPDRWE FANEGFLRGQ KHLLKTIRRR KTNNCCIEVG KYGLDGEMDS LRRDKQVLMM ELVKVRQQQQ STKMDLTLLE
201: DKLKKTESKQ KQMMSFLARA MQNPDFLQQL IEQKEKRKNT EEAIDKKRQR PIDQGKRHVV CVEDYDDGGG GYGRYGKDAG SSSAFFDMKQ ETYGDMSELD
301: RLAMHIQGLG DQCNKEDVVL DVGKGNEEEQ HKERYQDENN EIYGEGFWED LLNEGQNFDL QGDDEENVDV LIEQLGYLGS SGH
001: MDPSFRFIKE EFPAGFSDSP SPPSSSSYLY SSSMAEAAIN DPTTLSYPQP LEGLHESGPP PFLTKTYDLV EDSRTNHVVS WSKSNNSFIV WDPQAFSVTL
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN
Arabidopsis Description
HSFA6BHeat stress transcription factor A-6b [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.