Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69418 | Canola | nucleus | 91.84 | 83.16 |
| Bra008593.1-P | Field mustard | nucleus | 90.48 | 82.61 |
| CDX85486 | Canola | nucleus | 68.48 | 68.33 |
| CDY38085 | Canola | nucleus | 66.67 | 66.97 |
| AT5G16820.2 | Thale cress | nucleus | 71.43 | 65.49 |
| CDY43158 | Canola | nucleus | 39.0 | 56.21 |
| CDY28731 | Canola | nucleus | 55.1 | 55.73 |
| CDY58547 | Canola | nucleus | 54.65 | 53.08 |
| CDX74228 | Canola | nucleus | 52.83 | 51.21 |
| CDY43157 | Canola | cytosol | 10.43 | 51.11 |
| CDX92026 | Canola | nucleus | 51.25 | 50.45 |
| GSMUA_Achr4P04500_001 | Banana | nucleus | 44.22 | 44.42 |
| GSMUA_Achr3P27600_001 | Banana | nucleus | 42.63 | 44.13 |
| VIT_16s0039g01840.t01 | Wine grape | nucleus, plastid | 49.66 | 42.77 |
| KRH77766 | Soybean | nucleus | 41.72 | 39.66 |
| GSMUA_Achr4P17040_001 | Banana | nucleus | 43.54 | 39.43 |
| CDX78797 | Canola | nucleus | 38.1 | 39.07 |
| PGSC0003DMT400008199 | Potato | nucleus | 43.54 | 39.02 |
| Solyc03g097120.2.1 | Tomato | nucleus | 42.86 | 38.49 |
| CDX95313 | Canola | nucleus | 23.36 | 38.43 |
| CDY60785 | Canola | nucleus | 37.87 | 38.22 |
| KRH27709 | Soybean | nucleus | 39.91 | 37.93 |
| CDX90626 | Canola | nucleus | 23.13 | 37.92 |
| CDY29054 | Canola | nucleus | 22.68 | 37.74 |
| Os03t0854500-01 | Rice | nucleus | 43.08 | 37.55 |
| TraesCS5D01G553300.1 | Wheat | nucleus | 43.99 | 37.16 |
| CDY14893 | Canola | nucleus | 22.0 | 37.02 |
| TraesCS4A01G322300.1 | Wheat | nucleus | 43.54 | 36.85 |
| PGSC0003DMT400069550 | Potato | nucleus | 40.14 | 36.8 |
| TraesCS5B01G556200.1 | Wheat | nucleus | 43.99 | 36.67 |
| Solyc06g072750.2.1 | Tomato | nucleus | 39.68 | 36.31 |
| CDX90627 | Canola | nucleus | 23.36 | 35.89 |
| EER93074 | Sorghum | nucleus | 42.86 | 35.86 |
| CDY11470 | Canola | nucleus | 22.68 | 35.09 |
| Zm00001d034886_P001 | Maize | nucleus | 41.72 | 34.91 |
| CDX76693 | Canola | nucleus | 22.45 | 34.74 |
| CDY21503 | Canola | nucleus | 27.44 | 34.67 |
| CDX93842 | Canola | nucleus | 37.87 | 34.29 |
| CDY01288 | Canola | nucleus | 37.64 | 33.74 |
| CDX94887 | Canola | nucleus | 20.63 | 33.7 |
| Zm00001d012823_P001 | Maize | nucleus | 42.4 | 33.63 |
| HORVU5Hr1G123770.1 | Barley | nucleus | 43.76 | 33.62 |
| CDY10674 | Canola | nucleus | 28.57 | 32.39 |
| CDY13041 | Canola | nucleus | 22.45 | 32.25 |
| CDY10311 | Canola | nucleus | 28.34 | 32.22 |
| CDY34229 | Canola | nucleus | 27.66 | 32.19 |
| CDY46607 | Canola | nucleus | 26.98 | 32.08 |
| CDX93024 | Canola | nucleus | 22.22 | 32.03 |
| CDX83217 | Canola | nucleus | 26.53 | 31.37 |
| CDY46606 | Canola | nucleus | 27.21 | 31.33 |
| CDY09259 | Canola | nucleus | 25.62 | 31.22 |
| CDY23108 | Canola | nucleus | 24.04 | 31.18 |
| CDX94884 | Canola | nucleus | 20.18 | 31.01 |
| CDX77420 | Canola | nucleus | 22.0 | 30.89 |
| CDY39545 | Canola | nucleus | 22.0 | 30.89 |
| CDY50608 | Canola | nucleus | 22.0 | 30.79 |
| CDX76506 | Canola | nucleus | 25.4 | 30.6 |
| CDX99415 | Canola | nucleus | 26.53 | 30.47 |
| CDX92958 | Canola | nucleus | 23.13 | 29.65 |
| CDY01562 | Canola | nucleus | 26.08 | 29.26 |
| CDY69818 | Canola | nucleus | 25.85 | 29.23 |
| CDX70290 | Canola | nucleus | 23.36 | 28.37 |
| CDY44649 | Canola | nucleus | 30.39 | 28.21 |
| CDY10361 | Canola | nucleus | 24.26 | 26.68 |
| CDY12723 | Canola | nucleus | 26.98 | 25.05 |
| CDY01180 | Canola | nucleus | 25.62 | 23.69 |
| CDX78902 | Canola | nucleus | 24.72 | 21.08 |
| CDX84097 | Canola | nucleus | 12.02 | 19.7 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | GO:A0A078FW54 | UniProt:A0A078FW54 | EnsemblPlants:CDY16977 | ProteinID:CDY16977 |
| ProteinID:CDY16977.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00094912001 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 |
| ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF162 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0004EF2465 |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : |
Description
BnaC09g41040DBnaC09g41040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FW54]
Coordinates
chrLK032068:-:666632..668812
Molecular Weight (calculated)
48744.8 Da
IEP (calculated)
4.594
GRAVY (calculated)
-0.629
Length
441 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPVLEPAPS VNSNPSPIPP PINSVPPFLS KTYDMVDDLS TNEVVSWSSG NNSFVVWDVP EFSKVFLPKY FKHNNFSSFV RQLNTYGFRK VDPDRWEFAN
101: EGFLRDQKQL LKGITRRKSS HVQQQNQQQI QVQNSSLAPC VEELVRLRHQ QQATEHQLKD AVQKVQAMEQ RQQQMMSFLA KVVQSPGFLN QAQQSSNDGD
201: RQIQGSSNKK RRLPGEEAND VDRQIVKYQP SINEAAQTML RQFLNMSSSN ECESVSNSLN SSNAVSGVTL PEVSPDSAHS AMNQVPEAGL AHHPQAGLVQ
301: PNLGPSPAAA SWSPESECKT GNGECLDPIM AALGGSLEME GDAVSPKGEG EMKELLVPQL PGVQDPFWEQ FFADEAPVSG DAEETISGSV ENNDLAMGQE
401: LSEWTRDQQQ VNHITEQMGF LSSETHGGKN EKHLLCIDVL S
101: EGFLRDQKQL LKGITRRKSS HVQQQNQQQI QVQNSSLAPC VEELVRLRHQ QQATEHQLKD AVQKVQAMEQ RQQQMMSFLA KVVQSPGFLN QAQQSSNDGD
201: RQIQGSSNKK RRLPGEEAND VDRQIVKYQP SINEAAQTML RQFLNMSSSN ECESVSNSLN SSNAVSGVTL PEVSPDSAHS AMNQVPEAGL AHHPQAGLVQ
301: PNLGPSPAAA SWSPESECKT GNGECLDPIM AALGGSLEME GDAVSPKGEG EMKELLVPQL PGVQDPFWEQ FFADEAPVSG DAEETISGSV ENNDLAMGQE
401: LSEWTRDQQQ VNHITEQMGF LSSETHGGKN EKHLLCIDVL S
001: MDVSKVTTSD GGGDSMETKP SPQPQPAAIL SSNAPPPFLS KTYDMVDDHN TDSIVSWSAN NNSFIVWKPP EFARDLLPKN FKHNNFSSFV RQLNTYGFRK
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SRQNP
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SRQNP
Arabidopsis Description
HSFA1DHeat stress transcription factor A-1d [Source:UniProtKB/Swiss-Prot;Acc:Q9LQM7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.