CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021381.1-P	Field mustard	nucleus	99.12	99.12
CDY43158	Canola	nucleus	56.39	83.66
CDX74228	Canola	nucleus	81.06	80.88
CDY43157	Canola	cytosol	15.86	80.0
AT3G02990.1	Thale cress	nucleus	81.28	78.85
CDY28731	Canola	nucleus	74.67	77.75
CDX92026	Canola	nucleus	75.11	76.12
CDX85486	Canola	nucleus	61.67	63.35
CDY38085	Canola	nucleus	59.69	61.73
CDY16977	Canola	nucleus	53.08	54.65
CDX69418	Canola	nucleus	56.61	52.77
VIT_16s0039g01840.t01	Wine grape	nucleus, plastid	53.74	47.66
GSMUA_Achr4P04500_001	Banana	nucleus	45.15	46.7
KRH77766	Soybean	nucleus	46.7	45.69
KRH27709	Soybean	nucleus	45.59	44.61
PGSC0003DMT400008199	Potato	nucleus	47.58	43.9
CDY60785	Canola	nucleus	42.07	43.71
CDX78797	Canola	nucleus	41.19	43.49
Os03t0854500-01	Rice	nucleus	47.8	42.89
Solyc03g097120.2.1	Tomato	nucleus	46.26	42.77
GSMUA_Achr3P27600_001	Banana	nucleus	40.09	42.72
GSMUA_Achr4P17040_001	Banana	nucleus	44.05	41.07
TraesCS5D01G553300.1	Wheat	nucleus	46.92	40.8
TraesCS4A01G322300.1	Wheat	nucleus	46.7	40.69
CDX95313	Canola	nucleus	23.79	40.3
TraesCS5B01G556200.1	Wheat	nucleus	46.92	40.26
EER93074	Sorghum	nucleus	46.7	40.23
Zm00001d034886_P001	Maize	nucleus	46.26	39.85
CDX93842	Canola	nucleus	42.29	39.43
CDX90626	Canola	nucleus	23.13	39.03
CDY29054	Canola	nucleus	22.69	38.87
CDY01288	Canola	nucleus	42.07	38.82
PGSC0003DMT400069550	Potato	nucleus	40.75	38.46
Solyc06g072750.2.1	Tomato	nucleus	40.53	38.17
CDY14893	Canola	nucleus	22.03	38.17
CDY21503	Canola	nucleus	29.07	37.82
CDY11470	Canola	nucleus	23.57	37.54
CDX76693	Canola	nucleus	23.57	37.54
HORVU5Hr1G123770.1	Barley	nucleus	46.7	36.93
Zm00001d012823_P001	Maize	nucleus	44.93	36.69
CDX90627	Canola	nucleus	22.91	36.24
CDY34229	Canola	nucleus	29.74	35.62
CDX94887	Canola	nucleus	20.93	35.19
CDX83217	Canola	nucleus	28.63	34.85
CDY10674	Canola	nucleus	29.52	34.45
CDY44649	Canola	nucleus	35.46	33.89
CDY46606	Canola	nucleus	28.41	33.68
CDY10311	Canola	nucleus	28.63	33.51
CDY46607	Canola	nucleus	27.09	33.15
CDY13041	Canola	nucleus	22.25	32.9
CDY09259	Canola	nucleus	26.21	32.87
CDX94884	Canola	nucleus	20.48	32.4
CDX76506	Canola	nucleus	25.77	31.97
CDX92958	Canola	nucleus	24.01	31.69
CDX99415	Canola	nucleus	26.65	31.51
CDY23108	Canola	nucleus	23.57	31.47
CDX93024	Canola	nucleus	21.15	31.37
CDY39545	Canola	nucleus	21.37	30.89
CDX77420	Canola	nucleus	21.37	30.89
CDY50608	Canola	nucleus	21.37	30.79
CDY01562	Canola	nucleus	26.21	30.28
CDY69818	Canola	nucleus	25.99	30.26
CDX70290	Canola	nucleus	24.01	30.03
CDY10361	Canola	nucleus	24.67	27.93
CDY12723	Canola	nucleus	27.31	26.11
CDX84097	Canola	nucleus	15.2	25.65
CDY01180	Canola	nucleus	26.21	24.95
CDX78902	Canola	nucleus	25.11	22.05

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	MapMan:26.4.2.1	GO:A0A078J3X9	UniProt:A0A078J3X9	EnsemblPlants:CDY58547
ProteinID:CDY58547	ProteinID:CDY58547.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSBRNA2T00024833001	InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388	PFAM:PF00447
PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF162	SMART:SM00415	SUPFAM:SSF46785
UniParc:UPI0004EE1AC9	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg	:	:

Description

BnaAnng15230DBnaAnng15230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J3X9]

Coordinates

chrLK033678:-:11333..14105

Molecular Weight (calculated)

50380.9 Da

IEP (calculated)

5.057

GRAVY (calculated)

-0.664

Length

454 amino acids

Sequence
(BLAST)

001: MGSISESAPT ANSSTTVVMS SIPPFLSKTY DMVDDPSTDE VVSWSSGSNS FVVWNVPEFS KQFLPKYFKH NNFSSFVRQL NTYGFRKVDP DRWEFANEGF
101: LKGQKQLLKS IIRRKPTQVQ PPQQPQVQHS SVGACVEVGK FGLEEEVERL QRDKNVLMQE LVRLRQQQQV TEHHLQHVGQ KVHVMEQRQQ QMMSFLAKAV
201: QSPGFLNQFS QQSNNEGNQH ISESNKKRRL PVEDQKNRGG SSQGLNGLSR QIVRYQSSMN ESSNSMLQQI HNMSNTHTNN HGSFLLGDVP NPNLSDNGSS
301: SNGPSGVVAF TDVSSNTTNQ VLETNLPYPQ PQADLLAPKQ GAEGGSGSPS PDLVGGERDN GECLDPIMAV LDGSMMLETN ELLPGVQDSL WEQFFGESSG
401: IGDSDELVSG SVDNELIMEQ LELQPNLRNV LSNNQQMNHL TEQMGLLTSD ALRK

Best Arabidopsis Sequence Match ( AT3G02990.1 )
(BLAST)

001: MGTVCESVAT AKSSTAVMSS IPPFLSKTYD MVDDPLTDDV VSWSSGNNSF VVWNVPEFAK QFLPKYFKHN NFSSFVRQLN TYGFRKVDPD RWEFANEGFL
101: RGQKQILKSI VRRKPAQVQP PQQPQVQHSS VGACVEVGKF GLEEEVERLQ RDKNVLMQEL VRLRQQQQVT EHHLQNVGQK VHVMEQRQQQ MMSFLAKAVQ
201: SPGFLNQFSQ QSNEANQHIS ESNKKRRLPV EDQMNSGSHG VNGLSRQIVR YQSSMNDATN TMLQQIQQMS NAPSHESLSS NNGSFLLGDV PNSNISDNGS
301: SSNGSPEVTL ADVSSIPAGF YPAMKYHEPC ETNQVMETNL PFSQGDLLPP TQGAAASGSS SSDLVGCETD NGECLDPIMA VLDGALELEA DTLNELLPEV
401: QDSFWEQFIG ESPVIGETDE LISGSVENEL ILEQLELQST LSNVWSKNQQ MNHLTEQMGL LTSDALRK

Arabidopsis Description

HSFA1EHeat stress transcription factor A-1e [Source:UniProtKB/Swiss-Prot;Acc:Q9SCW5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.