Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007739.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX76693 | Canola | nucleus | 95.44 | 95.44 |
| AT3G63350.1 | Thale cress | nucleus | 78.25 | 79.08 |
| CDX90626 | Canola | nucleus | 57.89 | 61.34 |
| CDY29054 | Canola | nucleus | 56.49 | 60.75 |
| CDX95313 | Canola | nucleus | 55.44 | 58.96 |
| CDX90627 | Canola | nucleus | 55.44 | 55.05 |
| VIT_00s0179g00150.t01 | Wine grape | nucleus | 50.53 | 39.89 |
| KRG95588 | Soybean | nucleus | 50.88 | 39.19 |
| PGSC0003DMT400049795 | Potato | nucleus | 49.47 | 39.17 |
| KRH32059 | Soybean | nucleus | 46.67 | 39.0 |
| PGSC0003DMT400049793 | Potato | nucleus | 49.47 | 38.74 |
| Solyc09g065660.2.1 | Tomato | nucleus | 49.82 | 38.17 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 38.6 | 37.93 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 40.7 | 37.66 |
| KRH67266 | Soybean | nucleus | 50.88 | 37.56 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 45.26 | 37.5 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 44.56 | 37.24 |
| TraesCS4D01G276500.1 | Wheat | nucleus | 44.56 | 37.24 |
| TraesCS4B01G278100.1 | Wheat | nucleus | 44.56 | 37.24 |
| CDY14893 | Canola | nucleus | 32.98 | 35.88 |
| Os10t0419300-00 | Rice | nucleus | 42.81 | 34.08 |
| Os03t0161900-02 | Rice | nucleus | 45.26 | 34.04 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 39.65 | 33.93 |
| Zm00001d027757_P001 | Maize | nucleus | 45.26 | 33.59 |
| EER94213 | Sorghum | nucleus | 42.46 | 33.43 |
| Zm00001d032923_P002 | Maize | nucleus | 41.75 | 33.33 |
| CDX94887 | Canola | nucleus | 31.23 | 32.96 |
| EER95463 | Sorghum | nucleus | 44.91 | 32.74 |
| CDY34229 | Canola | nucleus | 43.51 | 32.72 |
| TraesCS5A01G437900.1 | Wheat | nucleus | 39.65 | 32.66 |
| CDY43158 | Canola | nucleus | 34.74 | 32.35 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 37.54 | 32.04 |
| TraesCS5B01G440700.1 | Wheat | nucleus | 39.65 | 32.01 |
| EER93298 | Sorghum | nucleus | 37.89 | 31.86 |
| TraesCS1B01G396000.1 | Wheat | nucleus | 40.0 | 31.84 |
| CDY21503 | Canola | nucleus | 38.95 | 31.81 |
| HORVU1Hr1G083420.2 | Barley | nucleus | 41.4 | 31.72 |
| CDX94884 | Canola | nucleus | 31.93 | 31.71 |
| CDY10674 | Canola | nucleus | 43.16 | 31.62 |
| TraesCS5D01G445100.1 | Wheat | nucleus | 38.6 | 31.61 |
| CDY46607 | Canola | nucleus | 41.05 | 31.54 |
| TraesCS1D01G382900.1 | Wheat | nucleus | 39.65 | 31.04 |
| TraesCS1A01G375600.2 | Wheat | nucleus | 40.0 | 30.98 |
| CDY10311 | Canola | nucleus | 42.11 | 30.93 |
| Zm00001d033987_P001 | Maize | nucleus | 40.0 | 30.73 |
| CDY46606 | Canola | nucleus | 40.7 | 30.29 |
| EER90889 | Sorghum | nucleus | 39.3 | 30.19 |
| EER95940 | Sorghum | nucleus | 39.3 | 30.11 |
| Os07t0178600-01 | Rice | nucleus | 38.95 | 29.84 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 38.6 | 29.65 |
| Zm00001d018941_P001 | Maize | nucleus | 38.6 | 29.33 |
| CDX83217 | Canola | nucleus | 38.25 | 29.22 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 37.54 | 28.76 |
| TraesCS5D01G393200.1 | Wheat | nucleus | 37.89 | 28.65 |
| CDX92958 | Canola | nucleus | 34.39 | 28.49 |
| TraesCS2B01G105100.1 | Wheat | nucleus | 40.0 | 28.15 |
| TraesCS2D01G087400.1 | Wheat | nucleus | 40.0 | 27.67 |
| TraesCS3A01G405200.1 | Wheat | nucleus | 38.25 | 27.46 |
| HORVU2Hr1G014590.1 | Barley | nucleus | 40.0 | 27.27 |
| TraesCS2A01G089300.1 | Wheat | nucleus | 39.3 | 27.12 |
| CDY13041 | Canola | nucleus | 28.42 | 26.38 |
| CDX93024 | Canola | nucleus | 28.07 | 26.14 |
| CDY39545 | Canola | nucleus | 28.07 | 25.48 |
| CDX77420 | Canola | nucleus | 28.07 | 25.48 |
| CDY50608 | Canola | nucleus | 27.72 | 25.08 |
| CDX70290 | Canola | nucleus | 31.93 | 25.07 |
| TraesCS3B01G438900.1 | Wheat | nucleus | 36.84 | 24.25 |
| CDX78797 | Canola | nucleus | 35.79 | 23.72 |
| CDY60785 | Canola | nucleus | 36.14 | 23.57 |
| CDY58547 | Canola | nucleus | 37.54 | 23.57 |
| CDY09259 | Canola | nucleus | 29.82 | 23.48 |
| CDX92026 | Canola | nucleus | 36.84 | 23.44 |
| CDY23108 | Canola | nucleus | 27.72 | 23.24 |
| CDY38085 | Canola | nucleus | 35.79 | 23.23 |
| CDX76506 | Canola | nucleus | 29.82 | 23.22 |
| CDX74228 | Canola | nucleus | 36.84 | 23.08 |
| CDX85486 | Canola | nucleus | 35.79 | 23.08 |
| CDY10361 | Canola | nucleus | 32.28 | 22.94 |
| CDY16977 | Canola | nucleus | 35.09 | 22.68 |
| CDY69818 | Canola | nucleus | 30.88 | 22.56 |
| CDY28731 | Canola | nucleus | 34.39 | 22.48 |
| CDY01562 | Canola | nucleus | 30.88 | 22.39 |
| HORVU5Hr1G105770.2 | Barley | nucleus | 40.0 | 21.88 |
| CDX99415 | Canola | nucleus | 29.47 | 21.88 |
| CDX93842 | Canola | nucleus | 36.14 | 21.15 |
| CDX69418 | Canola | nucleus | 35.79 | 20.94 |
| CDY01288 | Canola | nucleus | 36.14 | 20.93 |
| CDY12723 | Canola | nucleus | 31.58 | 18.95 |
| CDY01180 | Canola | nucleus | 30.88 | 18.45 |
| Zm00001d034433_P003 | Maize | nucleus | 38.95 | 17.87 |
| CDY44649 | Canola | nucleus | 29.12 | 17.47 |
| CDX78902 | Canola | nucleus | 30.88 | 17.02 |
| CDX84097 | Canola | nucleus | 6.32 | 6.69 |
| CDY43157 | Canola | cytosol | 1.75 | 5.56 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | GO:A0A078FAR0 | UniProt:A0A078FAR0 | EnsemblPlants:CDY11470 | ProteinID:CDY11470 |
| ProteinID:CDY11470.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00049541001 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 |
| PANTHER:PTHR10015 | PANTHER:PTHR10015:SF260 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0002542BAA | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : | : |
Description
BnaA09g40360DBnaA09g40360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FAR0]
Coordinates
chrLK032011:+:571625..573233
Molecular Weight (calculated)
33302.5 Da
IEP (calculated)
6.062
GRAVY (calculated)
-0.789
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPSSSSRAW SMPVPMKGLQ EPGPCPFLTK TFEMVDDPNT NHIVSWNRGG ISFVVWDPHS FSANILPLYF KHNNFSSFVR QLNTYFWRTS TKRSASSYCE
101: MMGFRKIEAE RWEFMNDGFL MGQRDLLKSI KRRTSSSAPP SLHHSQGDPC VELRQERHVL MMEISRLRQQ EQRARGYIQA MEQRINGAEK KQRHMMSFLR
201: RAVQNPALLQ QLLEQQRKEL EEASMDQVKP ETVEHVSELE ALALEMQGHG RQRTEEVEKE LDDGFWEELL MNKDEGEEED NVNTC
101: MMGFRKIEAE RWEFMNDGFL MGQRDLLKSI KRRTSSSAPP SLHHSQGDPC VELRQERHVL MMEISRLRQQ EQRARGYIQA MEQRINGAEK KQRHMMSFLR
201: RAVQNPALLQ QLLEQQRKEL EEASMDQVKP ETVEHVSELE ALALEMQGHG RQRTEEVEKE LDDGFWEELL MNKDEGEEED NVNTC
001: MDPSSSSRAR SMPPPVPMEG LQEAGPSPFL TKTFEMVGDP NTNHIVSWNR GGISFVVWDP HSFSATILPL YFKHNNFSSF VRQLNTYGFR KIEAERWEFM
101: NEGFLMGQRD LLKSIKRRTS SSSPPSLNYS QSQPEAHDPG VELPQLREER HVLMMEISTL RQEEQRARGY VQAMEQRING AEKKQRHMMS FLRRAVENPS
201: LLQQIFEQKR DREEAAMIDQ AGLIKMEEVE HLSELEALAL EMQGYGRQRT DGVERELDDG FWEELLMNNE NSDEEEANVK QD
101: NEGFLMGQRD LLKSIKRRTS SSSPPSLNYS QSQPEAHDPG VELPQLREER HVLMMEISTL RQEEQRARGY VQAMEQRING AEKKQRHMMS FLRRAVENPS
201: LLQQIFEQKR DREEAAMIDQ AGLIKMEEVE HLSELEALAL EMQGYGRQRT DGVERELDDG FWEELLMNNE NSDEEEANVK QD
Arabidopsis Description
HSFA7BHeat stress transcription factor A-7b [Source:UniProtKB/Swiss-Prot;Acc:Q9M1V5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.