Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G393200.1 | Wheat | nucleus | 93.26 | 91.78 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 91.37 | 91.13 |
| EER90889 | Sorghum | nucleus | 65.77 | 65.77 |
| Zm00001d033987_P001 | Maize | nucleus | 64.42 | 64.42 |
| Solyc06g053960.2.1 | Tomato | nucleus | 21.56 | 56.34 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 39.89 | 51.03 |
| HORVU7Hr1G034320.1 | Barley | nucleus, plastid | 18.06 | 50.0 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 44.47 | 49.4 |
| CDX95313 | Canola | nucleus | 34.77 | 48.13 |
| Bra012829.1-P | Field mustard | nucleus | 32.08 | 47.98 |
| AT3G51910.1 | Thale cress | nucleus | 35.04 | 47.79 |
| HORVU1Hr1G083420.2 | Barley | nucleus | 47.44 | 47.31 |
| HORVU7Hr1G055320.1 | Barley | mitochondrion, nucleus | 20.49 | 46.91 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 42.05 | 45.35 |
| KRH31657 | Soybean | nucleus | 40.97 | 45.1 |
| CDX90626 | Canola | nucleus | 32.34 | 44.61 |
| Bra012828.1-P | Field mustard | nucleus | 32.34 | 44.61 |
| CDY29054 | Canola | nucleus | 31.81 | 44.53 |
| VIT_00s0179g00150.t01 | Wine grape | nucleus | 42.32 | 43.49 |
| KRG91367 | Soybean | nucleus | 42.86 | 43.44 |
| CDX90627 | Canola | nucleus | 33.42 | 43.21 |
| HORVU2Hr1G043030.1 | Barley | nucleus | 17.79 | 42.58 |
| KRG95588 | Soybean | nucleus | 42.05 | 42.16 |
| HORVU2Hr1G014590.1 | Barley | nucleus | 46.36 | 41.15 |
| VIT_05s0020g04090.t01 | Wine grape | nucleus | 38.81 | 40.91 |
| CDX94887 | Canola | nucleus | 29.65 | 40.74 |
| KRH67266 | Soybean | nucleus | 42.32 | 40.67 |
| Solyc09g082670.2.1 | Tomato | nucleus | 38.81 | 40.45 |
| KRH32059 | Soybean | nucleus | 36.93 | 40.18 |
| KRH35452 | Soybean | nucleus | 39.62 | 40.16 |
| AT3G63350.1 | Thale cress | nucleus | 30.46 | 40.07 |
| CDY10674 | Canola | nucleus | 41.78 | 39.85 |
| CDY14893 | Canola | nucleus | 28.03 | 39.69 |
| CDY34229 | Canola | nucleus | 40.43 | 39.58 |
| PGSC0003DMT400016511 | Potato | nucleus | 38.54 | 39.5 |
| Bra035993.1-P | Field mustard | nucleus | 29.65 | 39.15 |
| AT5G43840.1 | Thale cress | nucleus | 29.65 | 39.01 |
| PGSC0003DMT400049793 | Potato | nucleus | 38.01 | 38.74 |
| Solyc09g065660.2.1 | Tomato | nucleus | 38.81 | 38.71 |
| PGSC0003DMT400049795 | Potato | nucleus | 37.47 | 38.61 |
| Bra007739.1-P | Field mustard | nucleus | 29.65 | 38.6 |
| CDY11470 | Canola | nucleus | 29.65 | 38.6 |
| CDY10311 | Canola | nucleus | 40.16 | 38.4 |
| Bra033913.1-P | Field mustard | nucleus | 42.05 | 38.33 |
| CDX76693 | Canola | nucleus | 29.38 | 38.25 |
| CDY46606 | Canola | nucleus | 39.35 | 38.12 |
| CDY46607 | Canola | nucleus | 38.01 | 38.01 |
| Bra023800.1-P | Field mustard | nucleus | 40.43 | 37.69 |
| PGSC0003DMT400041944 | Potato | nucleus | 34.77 | 37.5 |
| Bra001885.1-P | Field mustard | nucleus | 39.35 | 37.34 |
| AT3G22830.1 | Thale cress | nucleus | 40.7 | 37.19 |
| CDX94884 | Canola | nucleus | 28.57 | 36.93 |
| CDX92958 | Canola | nucleus | 32.61 | 35.17 |
| HORVU7Hr1G119990.1 | Barley | nucleus | 22.64 | 34.57 |
| HORVU7Hr1G088920.3 | Barley | nucleus | 23.18 | 32.33 |
| HORVU4Hr1G090090.4 | Barley | nucleus, plastid | 25.88 | 32.32 |
| HORVU5Hr1G105770.2 | Barley | nucleus | 45.01 | 32.05 |
| HORVU3Hr1G088890.2 | Barley | nucleus | 24.8 | 31.83 |
| HORVU7Hr1G087690.1 | Barley | nucleus | 30.73 | 31.23 |
| HORVU3Hr1G055960.1 | Barley | nucleus | 26.15 | 29.66 |
| HORVU4Hr1G090850.1 | Barley | nucleus | 25.61 | 28.27 |
| HORVU0Hr1G008940.2 | Barley | cytosol, nucleus | 19.68 | 24.91 |
| HORVU6Hr1G017910.1 | Barley | nucleus | 30.19 | 24.51 |
| HORVU5Hr1G123770.1 | Barley | nucleus | 37.2 | 24.04 |
| HORVU3Hr1G069590.4 | Barley | nucleus, plastid | 14.82 | 23.21 |
| HORVU1Hr1G081300.1 | Barley | nucleus | 26.15 | 22.51 |
| HORVU3Hr1G071550.3 | Barley | nucleus | 25.34 | 21.76 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | UniProt:A0A287SBD8 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:HORVU5Hr1G094380 | EnsemblPlants:HORVU5Hr1G094380.1 | InterPro:HSF_DNA-bd | InterPro:HSF_fam |
| InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 | ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF186 |
| SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI000B47D8FF | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg |
Description
No Description!
Coordinates
chrchr5H:+:595341025..595346840
Molecular Weight (calculated)
41043.8 Da
IEP (calculated)
5.454
GRAVY (calculated)
-0.681
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPFHGIVKE EEFDFAGAAA DGYSPSSWGS SPSSWGSSQS SWVGGGALAE LPRPMDGLGE AGPTPFLNKT YEVVDDHSTD TIVSWGVAGN SFVVWDAHAF
101: SMVLLPRYFK HSNFSSFVRQ LNTYGFRKVD PDRWEFAAEG FLRGQKELLK TIRRRRPQSS GTPGQQQQQQ GGVCLEVGHF GHDGEVQQLK RDKGTLIAEV
201: VKLRQEQQAT RVQMQAMEAR LAATEQKQQQ MTVFLARAMK SPSFLQMLVE RQDQSRRKEL ADALLSKKRG RPIEYLLPRN GETCYSAAAQ GYGHGLVDGG
301: EGRRADGEDT ESFWKELLSL GLEERQREAG GGGGGEASGA EVDDDVDDEV DELVQSLYHL SPNRPHGQHH Q
101: SMVLLPRYFK HSNFSSFVRQ LNTYGFRKVD PDRWEFAAEG FLRGQKELLK TIRRRRPQSS GTPGQQQQQQ GGVCLEVGHF GHDGEVQQLK RDKGTLIAEV
201: VKLRQEQQAT RVQMQAMEAR LAATEQKQQQ MTVFLARAMK SPSFLQMLVE RQDQSRRKEL ADALLSKKRG RPIEYLLPRN GETCYSAAAQ GYGHGLVDGG
301: EGRRADGEDT ESFWKELLSL GLEERQREAG GGGGGEASGA EVDDDVDDEV DELVQSLYHL SPNRPHGQHH Q
001: MEELKVEMEE ETVTFTGSVA ASSSVGSSSS PRPMEGLNET GPPPFLTKTY EMVEDPATDT VVSWSNGRNS FVVWDSHKFS TTLLPRYFKH SNFSSFIRQL
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
Arabidopsis Description
HSFA2Heat stress transcription factor A-2 [Source:UniProtKB/Swiss-Prot;Acc:O80982]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.