Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007739.1-P | Field mustard | nucleus | 95.44 | 95.44 |
| CDY11470 | Canola | nucleus | 95.44 | 95.44 |
| AT3G63350.1 | Thale cress | nucleus | 77.89 | 78.72 |
| CDX90626 | Canola | nucleus | 57.89 | 61.34 |
| CDY29054 | Canola | nucleus | 56.49 | 60.75 |
| CDX95313 | Canola | nucleus | 55.09 | 58.58 |
| CDX90627 | Canola | nucleus | 55.09 | 54.7 |
| PGSC0003DMT400049795 | Potato | nucleus | 49.47 | 39.17 |
| VIT_00s0179g00150.t01 | Wine grape | nucleus | 49.12 | 38.78 |
| PGSC0003DMT400049793 | Potato | nucleus | 49.47 | 38.74 |
| KRH32059 | Soybean | nucleus | 46.32 | 38.71 |
| KRG95588 | Soybean | nucleus | 50.18 | 38.65 |
| Solyc09g065660.2.1 | Tomato | nucleus | 49.82 | 38.17 |
| KRH67266 | Soybean | nucleus | 50.53 | 37.31 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 37.89 | 37.24 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 39.65 | 36.69 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 44.21 | 36.63 |
| TraesCS4D01G276500.1 | Wheat | nucleus | 43.51 | 36.36 |
| TraesCS4B01G278100.1 | Wheat | nucleus | 43.51 | 36.36 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 43.51 | 36.36 |
| CDY14893 | Canola | nucleus | 32.98 | 35.88 |
| Os03t0161900-02 | Rice | nucleus | 44.91 | 33.77 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 39.3 | 33.63 |
| EER94213 | Sorghum | nucleus | 42.46 | 33.43 |
| CDX94887 | Canola | nucleus | 31.58 | 33.33 |
| Os10t0419300-00 | Rice | nucleus | 41.75 | 33.24 |
| Zm00001d032923_P002 | Maize | nucleus | 41.4 | 33.05 |
| Zm00001d027757_P001 | Maize | nucleus | 44.21 | 32.81 |
| CDY34229 | Canola | nucleus | 43.51 | 32.72 |
| CDY43158 | Canola | nucleus | 34.74 | 32.35 |
| EER95463 | Sorghum | nucleus | 44.21 | 32.23 |
| TraesCS1B01G396000.1 | Wheat | nucleus | 40.0 | 31.84 |
| CDY46607 | Canola | nucleus | 41.4 | 31.81 |
| TraesCS5A01G437900.1 | Wheat | nucleus | 38.6 | 31.79 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 37.19 | 31.74 |
| HORVU1Hr1G083420.2 | Barley | nucleus | 41.4 | 31.72 |
| CDX94884 | Canola | nucleus | 31.93 | 31.71 |
| CDY21503 | Canola | nucleus | 38.6 | 31.52 |
| CDY10674 | Canola | nucleus | 42.81 | 31.36 |
| TraesCS5B01G440700.1 | Wheat | nucleus | 38.6 | 31.16 |
| TraesCS1D01G382900.1 | Wheat | nucleus | 39.65 | 31.04 |
| TraesCS1A01G375600.2 | Wheat | nucleus | 40.0 | 30.98 |
| EER93298 | Sorghum | nucleus | 36.84 | 30.97 |
| TraesCS5D01G445100.1 | Wheat | nucleus | 37.54 | 30.75 |
| Zm00001d033987_P001 | Maize | nucleus | 40.0 | 30.73 |
| CDY46606 | Canola | nucleus | 41.05 | 30.55 |
| CDY10311 | Canola | nucleus | 41.4 | 30.41 |
| EER90889 | Sorghum | nucleus | 38.95 | 29.92 |
| Os07t0178600-01 | Rice | nucleus | 38.6 | 29.57 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 38.25 | 29.38 |
| EER95940 | Sorghum | nucleus | 38.25 | 29.3 |
| Zm00001d018941_P001 | Maize | nucleus | 38.25 | 29.07 |
| CDX83217 | Canola | nucleus | 37.89 | 28.95 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 37.54 | 28.76 |
| TraesCS5D01G393200.1 | Wheat | nucleus | 37.89 | 28.65 |
| CDX92958 | Canola | nucleus | 34.04 | 28.2 |
| TraesCS2B01G105100.1 | Wheat | nucleus | 39.3 | 27.65 |
| TraesCS3A01G405200.1 | Wheat | nucleus | 37.89 | 27.2 |
| TraesCS2D01G087400.1 | Wheat | nucleus | 39.3 | 27.18 |
| HORVU2Hr1G014590.1 | Barley | nucleus | 39.3 | 26.79 |
| TraesCS2A01G089300.1 | Wheat | nucleus | 38.6 | 26.63 |
| CDX93024 | Canola | nucleus | 28.07 | 26.14 |
| CDY13041 | Canola | nucleus | 27.72 | 25.73 |
| CDX77420 | Canola | nucleus | 28.07 | 25.48 |
| CDY39545 | Canola | nucleus | 28.07 | 25.48 |
| CDX70290 | Canola | nucleus | 32.28 | 25.34 |
| CDY50608 | Canola | nucleus | 27.72 | 25.08 |
| TraesCS3B01G438900.1 | Wheat | nucleus | 36.14 | 23.79 |
| CDX78797 | Canola | nucleus | 35.79 | 23.72 |
| CDY58547 | Canola | nucleus | 37.54 | 23.57 |
| CDY38085 | Canola | nucleus | 36.14 | 23.46 |
| CDX92026 | Canola | nucleus | 36.84 | 23.44 |
| CDY60785 | Canola | nucleus | 35.79 | 23.34 |
| CDX85486 | Canola | nucleus | 36.14 | 23.3 |
| CDY10361 | Canola | nucleus | 32.63 | 23.19 |
| CDX74228 | Canola | nucleus | 36.84 | 23.08 |
| CDY09259 | Canola | nucleus | 29.12 | 22.93 |
| CDX76506 | Canola | nucleus | 29.12 | 22.68 |
| CDY23108 | Canola | nucleus | 27.02 | 22.65 |
| CDY16977 | Canola | nucleus | 34.74 | 22.45 |
| CDY28731 | Canola | nucleus | 34.04 | 22.25 |
| CDY69818 | Canola | nucleus | 30.18 | 22.05 |
| CDY01562 | Canola | nucleus | 30.18 | 21.88 |
| CDX99415 | Canola | nucleus | 29.47 | 21.88 |
| CDX93842 | Canola | nucleus | 36.84 | 21.56 |
| CDY01288 | Canola | nucleus | 36.84 | 21.34 |
| HORVU5Hr1G105770.2 | Barley | nucleus | 38.95 | 21.31 |
| CDX69418 | Canola | nucleus | 35.79 | 20.94 |
| CDY12723 | Canola | nucleus | 31.23 | 18.74 |
| CDY01180 | Canola | nucleus | 30.53 | 18.24 |
| CDY44649 | Canola | nucleus | 29.82 | 17.89 |
| Zm00001d034433_P003 | Maize | nucleus | 37.89 | 17.39 |
| CDX78902 | Canola | nucleus | 29.82 | 16.44 |
| CDX84097 | Canola | nucleus | 7.02 | 7.43 |
| CDY43157 | Canola | cytosol | 1.4 | 4.44 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | GO:A0A078CNN2 | EnsemblPlants:CDX76693 | ProteinID:CDX76693 | ProteinID:CDX76693.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00127177001 |
| InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 | PANTHER:PTHR10015 |
| PANTHER:PTHR10015:SF260 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0004EE3C72 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC08g32790D
Coordinates
chrLK031808:+:590136..591818
Molecular Weight (calculated)
33203.5 Da
IEP (calculated)
6.323
GRAVY (calculated)
-0.723
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPSSSSRAW SMPVPMGGLQ EPGPYPFLTK TFEMVDDPNT NHIVSWNRGG ISFVVWDPRS FSATILPLYF KHNNFSSFVR QLNTYFWRTS TKRSASSYCE
101: MGFRKIEAER WEFMNDGFLM GQRDLLKSIK RRTSSSAPPS LHHAQGDPCV ELRQERHVLM MEISRLRQQE QRARGYIQTM EQRINGAEKK QRHMMSFLRR
201: AVQNPALLQQ LLEQQRKELE EASMDQVKPE TVEHVSELEA LALEMQGHGR QRTEEVEREL DDGFWEELLI MNKDEDGVEA NVNAC
101: MGFRKIEAER WEFMNDGFLM GQRDLLKSIK RRTSSSAPPS LHHAQGDPCV ELRQERHVLM MEISRLRQQE QRARGYIQTM EQRINGAEKK QRHMMSFLRR
201: AVQNPALLQQ LLEQQRKELE EASMDQVKPE TVEHVSELEA LALEMQGHGR QRTEEVEREL DDGFWEELLI MNKDEDGVEA NVNAC
001: MDPSSSSRAR SMPPPVPMEG LQEAGPSPFL TKTFEMVGDP NTNHIVSWNR GGISFVVWDP HSFSATILPL YFKHNNFSSF VRQLNTYGFR KIEAERWEFM
101: NEGFLMGQRD LLKSIKRRTS SSSPPSLNYS QSQPEAHDPG VELPQLREER HVLMMEISTL RQEEQRARGY VQAMEQRING AEKKQRHMMS FLRRAVENPS
201: LLQQIFEQKR DREEAAMIDQ AGLIKMEEVE HLSELEALAL EMQGYGRQRT DGVERELDDG FWEELLMNNE NSDEEEANVK QD
101: NEGFLMGQRD LLKSIKRRTS SSSPPSLNYS QSQPEAHDPG VELPQLREER HVLMMEISTL RQEEQRARGY VQAMEQRING AEKKQRHMMS FLRRAVENPS
201: LLQQIFEQKR DREEAAMIDQ AGLIKMEEVE HLSELEALAL EMQGYGRQRT DGVERELDDG FWEELLMNNE NSDEEEANVK QD
Arabidopsis Description
HSFA7BHeat stress transcription factor A-7b [Source:UniProtKB/Swiss-Prot;Acc:Q9M1V5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.