Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009515.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY10361 | Canola | nucleus | 98.07 | 88.78 |
| AT5G03720.1 | Thale cress | nucleus | 85.12 | 75.0 |
| KRH67848 | Soybean | nucleus | 48.48 | 41.61 |
| KRH20029 | Soybean | nucleus | 51.24 | 40.97 |
| KRH32651 | Soybean | nucleus | 51.79 | 40.87 |
| PGSC0003DMT400006917 | Potato | nucleus | 47.93 | 35.01 |
| CDY29054 | Canola | nucleus | 25.34 | 34.72 |
| CDY43158 | Canola | nucleus | 28.93 | 34.31 |
| CDX90626 | Canola | nucleus | 25.34 | 34.2 |
| Solyc09g009100.2.1 | Tomato | nucleus | 47.66 | 33.99 |
| CDX95313 | Canola | nucleus | 25.07 | 33.96 |
| VIT_08s0007g03900.t01 | Wine grape | nucleus | 48.48 | 33.15 |
| CDX76693 | Canola | nucleus | 25.34 | 32.28 |
| CDY14893 | Canola | nucleus | 23.14 | 32.06 |
| CDY11470 | Canola | nucleus | 25.07 | 31.93 |
| CDX90627 | Canola | nucleus | 25.07 | 31.71 |
| CDX93024 | Canola | nucleus | 25.07 | 29.74 |
| CDY39545 | Canola | nucleus | 25.62 | 29.62 |
| CDX77420 | Canola | nucleus | 25.62 | 29.62 |
| CDY50608 | Canola | nucleus | 25.07 | 28.89 |
| CDY21503 | Canola | nucleus | 27.55 | 28.65 |
| CDY13041 | Canola | nucleus | 23.97 | 28.34 |
| CDX94887 | Canola | nucleus | 20.94 | 28.15 |
| CDX94884 | Canola | nucleus | 21.21 | 26.83 |
| CDX83217 | Canola | nucleus | 27.55 | 26.81 |
| GSMUA_Achr5P15900_001 | Banana | nucleus | 39.94 | 26.51 |
| CDY34229 | Canola | nucleus | 27.27 | 26.12 |
| CDX78797 | Canola | nucleus | 30.85 | 26.05 |
| CDY23108 | Canola | nucleus | 24.24 | 25.88 |
| CDY38085 | Canola | nucleus | 31.13 | 25.74 |
| CDX85486 | Canola | nucleus | 31.13 | 25.57 |
| CDY60785 | Canola | nucleus | 30.58 | 25.4 |
| CDY09259 | Canola | nucleus | 25.07 | 25.14 |
| CDY46607 | Canola | nucleus | 25.62 | 25.07 |
| CDY46606 | Canola | nucleus | 26.45 | 25.07 |
| CDY10674 | Canola | nucleus | 26.72 | 24.94 |
| CDX76506 | Canola | nucleus | 25.07 | 24.86 |
| CDX99415 | Canola | nucleus | 25.9 | 24.48 |
| CDY10311 | Canola | nucleus | 25.9 | 24.23 |
| CDX92026 | Canola | nucleus | 29.75 | 24.11 |
| CDY58547 | Canola | nucleus | 30.03 | 24.01 |
| CDX93842 | Canola | nucleus | 31.96 | 23.82 |
| CDX74228 | Canola | nucleus | 29.75 | 23.74 |
| CDY28731 | Canola | nucleus | 28.37 | 23.62 |
| CDY01288 | Canola | nucleus | 31.96 | 23.58 |
| CDY16977 | Canola | nucleus | 28.37 | 23.36 |
| CDX92958 | Canola | nucleus | 22.04 | 23.26 |
| CDY01562 | Canola | nucleus | 24.52 | 22.65 |
| CDY69818 | Canola | nucleus | 24.24 | 22.56 |
| CDX69418 | Canola | nucleus | 30.03 | 22.38 |
| CDY44649 | Canola | nucleus | 25.07 | 19.16 |
| CDY12723 | Canola | nucleus | 22.59 | 17.26 |
| CDX78902 | Canola | nucleus | 24.52 | 17.21 |
| CDY01180 | Canola | nucleus | 22.59 | 17.19 |
| CDX84097 | Canola | nucleus | 5.23 | 7.06 |
| CDY43157 | Canola | cytosol | 1.1 | 4.44 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | GO:A0A078BZX9 | EnsemblPlants:CDX70290 | ProteinID:CDX70290 | ProteinID:CDX70290.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00136440001 |
| InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 | ScanProsite:PS00434 |
| PANTHER:PTHR10015 | PANTHER:PTHR10015:SF164 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0002547B4A | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : | : |
Description
BnaA10g26390D
Coordinates
chrLK031790:+:3958204..3960301
Molecular Weight (calculated)
41168.3 Da
IEP (calculated)
4.779
GRAVY (calculated)
-0.709
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLDILHGNP IPPFLSKTFD LVDDPSLDPV ISWGLTGASF VVWDPVEFAR IILPRNFKHN NFSSFVRQLN TYGFRKIDTD KWEFANEAFL RGQKHLLKNI
101: HRRRSPQSNQ ACSSSITSQQ SQGSPTEVGE EIEKLRKERR ALMEEMVELQ QQNRGTARHV DTVNQRLKAA EQRQKQMLSF LAKLFQNPGF LDRLKSLKGE
201: GGGLGFEKAR KKFIKHSPTG GEIVKYEADD WERLLMSEEK DTENILPSNQ GMTSTDPKGK NLMNPSEEET MNQDYFLPFP TPEGLIKQEE TWSMGFDTTI
301: PSFSNEDVWG NTMDYNVAEF GSVPETSSGG CLPDVCWEQF AAGMTETGFN WPPGDDTTPM DDP
101: HRRRSPQSNQ ACSSSITSQQ SQGSPTEVGE EIEKLRKERR ALMEEMVELQ QQNRGTARHV DTVNQRLKAA EQRQKQMLSF LAKLFQNPGF LDRLKSLKGE
201: GGGLGFEKAR KKFIKHSPTG GEIVKYEADD WERLLMSEEK DTENILPSNQ GMTSTDPKGK NLMNPSEEET MNQDYFLPFP TPEGLIKQEE TWSMGFDTTI
301: PSFSNEDVWG NTMDYNVAEF GSVPETSSGG CLPDVCWEQF AAGMTETGFN WPPGDDTTPM DDP
001: MSPKKDAVSK PTPISVPVSR RSDIPGSLYV DTDMGFSGSP LPMPLDILQG NPIPPFLSKT FDLVDDPTLD PVISWGLTGA SFVVWDPLEF ARIILPRNFK
101: HNNFSSFVRQ LNTYGFRKID TDKWEFANEA FLRGKKHLLK NIHRRRSPQS NQTCCSSTSQ SQGSPTEVGG EIEKLRKERR ALMEEMVELQ QQSRGTARHV
201: DTVNQRLKAA EQRQKQLLSF LAKLFQNRGF LERLKNFKGK EKGGALGLEK ARKKFIKHHQ QPQDSPTGGE VVKYEADDWE RLLMYDEETE NTKGLGGMTS
301: SDPKGKNLMY PSEEEMSKPD YLMSFPSPEG LIKQEETTWS MGFDTTIPSF SNTDAWGNTM DYNDVSEFGF AAETTSDGLP DVCWEQFAAG ITETGFNWPT
401: GDDDDNTPMN DP
101: HNNFSSFVRQ LNTYGFRKID TDKWEFANEA FLRGKKHLLK NIHRRRSPQS NQTCCSSTSQ SQGSPTEVGG EIEKLRKERR ALMEEMVELQ QQSRGTARHV
201: DTVNQRLKAA EQRQKQLLSF LAKLFQNRGF LERLKNFKGK EKGGALGLEK ARKKFIKHHQ QPQDSPTGGE VVKYEADDWE RLLMYDEETE NTKGLGGMTS
301: SDPKGKNLMY PSEEEMSKPD YLMSFPSPEG LIKQEETTWS MGFDTTIPSF SNTDAWGNTM DYNDVSEFGF AAETTSDGLP DVCWEQFAAG ITETGFNWPT
401: GDDDDNTPMN DP
Arabidopsis Description
HSFA3HSFA3 [Source:UniProtKB/TrEMBL;Acc:A0A178UHR4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.