Factsheet for Solyc09g009100.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400006917	Potato	nucleus	87.43	89.54
Solyc06g053960.2.1	Tomato	nucleus	13.75	49.3
KRH20029	Soybean	nucleus	43.61	48.9
KRH32651	Soybean	nucleus	43.81	48.48
Bra009515.1-P	Field mustard	nucleus	33.99	47.66
CDX70290	Canola	nucleus	33.99	47.66
VIT_08s0007g03900.t01	Wine grape	nucleus	48.53	46.52
CDY10361	Canola	nucleus	35.76	45.39
KRH67848	Soybean	nucleus	36.94	44.44
AT5G03720.1	Thale cress	nucleus	34.77	42.96
Solyc09g082670.2.1	Tomato	nucleus	23.58	33.71
GSMUA_Achr5P15900_001	Banana	nucleus	36.15	33.64
Solyc07g040680.2.1	Tomato	nucleus	22.4	32.02
Solyc09g065660.2.1	Tomato	nucleus	23.38	31.99
Solyc06g072750.2.1	Tomato	nucleus	24.16	25.52
Solyc02g072000.2.1	Tomato	nucleus	20.04	25.0
Solyc12g007070.1.1	Tomato	nucleus	17.88	24.66
Solyc08g076590.2.1	Tomato	nucleus	23.58	24.49
Solyc08g005170.2.1	Tomato	nucleus	24.95	24.1
Solyc03g006000.2.1	Tomato	nucleus	18.86	23.94
Solyc03g097120.2.1	Tomato	nucleus	22.99	23.83
Solyc07g055710.2.1	Tomato	nucleus	18.07	23.71
Solyc12g098520.1.1	Tomato	nucleus	20.63	21.97

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009408	GO:GO:0009628	GO:GO:0009719	GO:GO:0009987	GO:GO:0010200	GO:GO:0043565
InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388	UniProt:K4CQT9	PFAM:PF00447	PRINTS:PR00056
PANTHER:PTHR10015	PANTHER:PTHR10015:SF164	SMART:SM00415	SUPFAM:SSF46785	EnsemblPlantsGene:Solyc09g009100.2	EnsemblPlants:Solyc09g009100.2.1
UniParc:UPI000276C2DE	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chr9:-:2445341..2448016

Molecular Weight (calculated)

56101.5 Da

IEP (calculated)

4.550

GRAVY (calculated)

-0.546

Length

509 amino acids

Sequence
(BLAST)

001: MNPFDKKQES DTDTKTPFLT EMDSEFAAFS PISLPFADPS SPFINFGSFA TPLSQHPVGE GEGEGEGGEI EQPAEGGLGV PQPMECLHGI QIPPFLSKTF
101: DLVEDPLLDT IISWGRNGES FVVWDPVEFS RLVLPRNFKH SNFSSFVRQL NTYVDKGFRK IDADRWEFAN EGFSRGKRHL LKNIQRRRSH QGGSSSGSSA
201: EAGKGTMDEI EKLRNEKSLM MQEVVELQQQ QRGTVQQMES VNEKLQAAEQ RQKQMVSFLA KVLQNPTFLA RVRQMKEQGE ITSPRTMRKF VKHQSHGPDG
301: VGSSSMEGQI VKFRSDFQDL AGCFDSPDFN TVVDQQLPEI GLGAEAMPFE GVPVADELTV AHELLNCSDR EIRGASFFNS EGSQFKGKNV ASPQIEVMPE
401: YFASFPEEMG KEKNVSGFST PAIGSMVKDE ELWGMGFEAS AGMPSTGAEL WDSRSSYVPD FGVSSGLSDL WDIDPLQVAG SSGVDKWPAD GSPFGQSGSH
501: ANQPKNDSF

Best Arabidopsis Sequence Match ( AT5G03720.1 )
(BLAST)

001: MSPKKDAVSK PTPISVPVSR RSDIPGSLYV DTDMGFSGSP LPMPLDILQG NPIPPFLSKT FDLVDDPTLD PVISWGLTGA SFVVWDPLEF ARIILPRNFK
101: HNNFSSFVRQ LNTYGFRKID TDKWEFANEA FLRGKKHLLK NIHRRRSPQS NQTCCSSTSQ SQGSPTEVGG EIEKLRKERR ALMEEMVELQ QQSRGTARHV
201: DTVNQRLKAA EQRQKQLLSF LAKLFQNRGF LERLKNFKGK EKGGALGLEK ARKKFIKHHQ QPQDSPTGGE VVKYEADDWE RLLMYDEETE NTKGLGGMTS
301: SDPKGKNLMY PSEEEMSKPD YLMSFPSPEG LIKQEETTWS MGFDTTIPSF SNTDAWGNTM DYNDVSEFGF AAETTSDGLP DVCWEQFAAG ITETGFNWPT
401: GDDDDNTPMN DP

Arabidopsis Description

HSFA3HSFA3 [Source:UniProtKB/TrEMBL;Acc:A0A178UHR4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.