Factsheet for Solyc07g040680.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400082752	Potato	nucleus	93.26	91.97
Solyc06g053960.2.1	Tomato	nucleus	19.38	48.59
Solyc09g065660.2.1	Tomato	nucleus	35.11	33.6
AT5G54070.1	Thale cress	nucleus	30.62	32.93
KRH02689	Soybean	nucleus	35.67	31.44
KRH19208	Soybean	nucleus	35.96	31.37
Solyc09g082670.2.1	Tomato	nucleus	30.34	30.34
Solyc03g006000.2.1	Tomato	nucleus	26.97	23.94
Solyc07g055710.2.1	Tomato	nucleus	25.84	23.71
Solyc03g097120.2.1	Tomato	nucleus	32.02	23.22
Solyc08g076590.2.1	Tomato	nucleus	31.74	23.06
Solyc02g072000.2.1	Tomato	nucleus	26.4	23.04
Solyc06g072750.2.1	Tomato	nucleus	30.62	22.61
Solyc09g009100.2.1	Tomato	nucleus	32.02	22.4
Solyc08g005170.2.1	Tomato	nucleus	33.15	22.39
Solyc12g098520.1.1	Tomato	nucleus	30.06	22.38
Solyc12g007070.1.1	Tomato	nucleus	22.75	21.95

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388	UniProt:K4CDU5	PFAM:PF00447
PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF217	SMART:SM00415	SUPFAM:SSF46785
EnsemblPlantsGene:Solyc07g040680.2	EnsemblPlants:Solyc07g040680.2.1	UniParc:UPI000276B61D	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg

Description

No Description!

Coordinates

chr7:+:49379261..49380929

Molecular Weight (calculated)

40873.5 Da

IEP (calculated)

5.146

GRAVY (calculated)

-0.758

Length

356 amino acids

Sequence
(BLAST)

001: MEEEKTMLID VNEKEMNVNG GVVVEVKEEP VIFINDEDDI IGDSVPKPLD GLRDVGPPPF LKKTFEMVDD PNTDSIISWS NSQNSFVVWD PHKFSIHLLP
101: KHFKHNNFSS FIRQLNTYRF RKIDSDRWEF ANEGFQKGKK HLLINIKRRK QYPQLGGGGG GGAKSWVGGC CKDGTEAAEI EKLKKDHNTL KMEILKLKQQ
201: QESTDNYLAT MKERLQNSEI KQKYMVIFLA KTFHNPMFVQ HLIEKVKQGK TTTVENGTKK RRLCSDENQE EYTTIKSEIQ TLFSCDESSN SPVEEQKGKG
301: NNSSPEMVSE NYILWEKLME DDMICENGAE TDKYQSEIVL ELEDLISNPS ECKCMP

Best Arabidopsis Sequence Match ( AT2G26150.4 )
(BLAST)

001: MEELKVEMEE ETVTFTGSVA ASSSVGSSSS PRPMEGLNET GPPPFLTKTY EMVEDPATDT VVSWSNGRNS FVVWDSHKFS TTLLPRYFKH SNFSSFIRQL
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP

Arabidopsis Description

HSFA2Heat stress transcription factor A-2 [Source:UniProtKB/Swiss-Prot;Acc:O80982]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.