Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH02689 | Soybean | nucleus | 41.09 | 33.66 |
| KRH19208 | Soybean | nucleus | 41.39 | 33.58 |
| AT3G51910.1 | Thale cress | nucleus | 25.38 | 30.88 |
| Solyc07g040680.2.1 | Tomato | nucleus | 32.93 | 30.62 |
| PGSC0003DMT400082752 | Potato | nucleus | 33.23 | 30.47 |
| AT5G43840.1 | Thale cress | nucleus | 24.47 | 28.72 |
| AT2G26150.1 | Thale cress | nucleus | 29.91 | 28.7 |
| AT3G63350.1 | Thale cress | nucleus | 22.36 | 26.24 |
| AT3G22830.1 | Thale cress | nucleus | 29.61 | 24.14 |
| AT5G03720.1 | Thale cress | nucleus | 28.1 | 22.57 |
| AT5G45710.3 | Thale cress | nucleus | 23.26 | 22.32 |
| AT3G24520.1 | Thale cress | nucleus | 22.05 | 22.12 |
| AT5G16820.2 | Thale cress | nucleus | 29.61 | 20.37 |
| AT3G02990.1 | Thale cress | nucleus | 28.4 | 20.09 |
| AT4G18880.1 | Thale cress | nucleus | 23.26 | 19.2 |
| AT4G17750.1 | Thale cress | nucleus | 28.7 | 19.19 |
| AT1G32330.1 | Thale cress | nucleus | 27.49 | 18.76 |
| AT4G13980.1 | Thale cress | nucleus | 25.98 | 18.45 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | EntrezGene:835493 | UniProt:A0A178UP77 | ProteinID:AED96446.1 | Symbol:AT-HSFA9 |
| ArrayExpress:AT5G54070 | EnsemblPlantsGene:AT5G54070 | RefSeq:AT5G54070 | TAIR:AT5G54070 | RefSeq:AT5G54070-TAIR-G | EnsemblPlants:AT5G54070.1 |
| TAIR:AT5G54070.1 | EMBL:AY065226 | EMBL:AY096552 | Unigene:At.28558 | ProteinID:BAA97129.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HSF_DNA-bd | InterPro:HSF_fam |
| InterPro:IPR036388 | RefSeq:NP_200218.1 | ProteinID:OAO94461.1 | PFAM:PF00447 | PO:PO:0007632 | PRINTS:PR00056 |
| ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF217 | UniProt:Q9LVW2 | SMART:SM00415 | SUPFAM:SSF46785 |
| UniParc:UPI00000A0C99 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : |
Description
HSFA9Heat stress transcription factor A-9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVW2]
Coordinates
chr5:+:21943983..21945651
Molecular Weight (calculated)
38148.2 Da
IEP (calculated)
5.373
GRAVY (calculated)
-0.681
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAIPNVVDI ESSSSSLCQE TATETVTVER GSSDSSSKPD DVVLLIKEEE DDAVNLSLGF WKLHEIGLIT PFLRKTFEIV DDKVTDPVVS WSPTRKSFII
101: WDSYEFSENL LPKYFKHKNF SSFIRQLNSY GFKKVDSDRW EFANEGFQGG KKHLLKNIKR RSKNTKCCNK EASTTTTETE VESLKEEQSP MRLEMLKLKQ
201: QQEESQHQMV TVQEKIHGVD TEQQHMLSFF AKLAKDQRFV ERLVKKRKMK IQRELEAAEF VKKLKLLQDQ ETQKNLLDVE REFMAMAATE HNPEPDILVN
301: NQSGNTRCQL NSEDLLVDGG SMDVNGRIEI E
101: WDSYEFSENL LPKYFKHKNF SSFIRQLNSY GFKKVDSDRW EFANEGFQGG KKHLLKNIKR RSKNTKCCNK EASTTTTETE VESLKEEQSP MRLEMLKLKQ
201: QQEESQHQMV TVQEKIHGVD TEQQHMLSFF AKLAKDQRFV ERLVKKRKMK IQRELEAAEF VKKLKLLQDQ ETQKNLLDVE REFMAMAATE HNPEPDILVN
301: NQSGNTRCQL NSEDLLVDGG SMDVNGRIEI E
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.