Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70290 | Canola | nucleus | 75.0 | 85.12 |
| Bra009515.1-P | Field mustard | nucleus | 75.0 | 85.12 |
| CDY10361 | Canola | nucleus | 80.1 | 82.29 |
| KRH67848 | Soybean | nucleus | 43.69 | 42.55 |
| KRH20029 | Soybean | nucleus | 45.63 | 41.41 |
| KRH32651 | Soybean | nucleus | 45.87 | 41.09 |
| VIT_08s0007g03900.t01 | Wine grape | nucleus | 45.39 | 35.22 |
| PGSC0003DMT400006917 | Potato | nucleus | 42.23 | 35.01 |
| Solyc09g009100.2.1 | Tomato | nucleus | 42.96 | 34.77 |
| AT3G51910.1 | Thale cress | nucleus | 22.82 | 34.56 |
| AT5G43840.1 | Thale cress | nucleus | 22.57 | 32.98 |
| AT3G63350.1 | Thale cress | nucleus | 21.6 | 31.56 |
| AT2G26150.1 | Thale cress | nucleus | 25.0 | 29.86 |
| AT5G54070.1 | Thale cress | nucleus | 22.57 | 28.1 |
| GSMUA_Achr5P15900_001 | Banana | nucleus | 37.14 | 27.97 |
| AT3G22830.1 | Thale cress | nucleus | 26.46 | 26.85 |
| AT3G24520.1 | Thale cress | nucleus | 21.36 | 26.67 |
| AT5G45710.3 | Thale cress | nucleus | 21.36 | 25.51 |
| AT1G32330.1 | Thale cress | nucleus | 28.64 | 24.33 |
| AT4G18880.1 | Thale cress | nucleus | 23.3 | 23.94 |
| AT5G16820.2 | Thale cress | nucleus | 26.94 | 23.08 |
| AT3G02990.1 | Thale cress | nucleus | 25.49 | 22.44 |
| AT4G17750.1 | Thale cress | nucleus | 26.7 | 22.22 |
| AT4G13980.1 | Thale cress | nucleus | 20.39 | 18.03 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | EntrezGene:831749 | UniProt:A0A178UHR4 | ProteinID:AED90646.1 | EMBL:AK117318 |
| ProteinID:ANM70765.1 | Symbol:AT-HSFA3 | ArrayExpress:AT5G03720 | EnsemblPlantsGene:AT5G03720 | RefSeq:AT5G03720 | TAIR:AT5G03720 |
| RefSeq:AT5G03720-TAIR-G | EnsemblPlants:AT5G03720.1 | TAIR:AT5G03720.1 | ProteinID:CAB82937.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009408 | GO:GO:0009628 |
| GO:GO:0009719 | GO:GO:0009987 | GO:GO:0010200 | GO:GO:0043565 | InterPro:HSF_DNA-bd | InterPro:HSF_fam |
| InterPro:IPR036388 | RefSeq:NP_001318473.1 | RefSeq:NP_195992.2 | ProteinID:OAO93323.1 | PFAM:PF00447 | PO:PO:0000037 |
| PO:PO:0000293 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PRINTS:PR00056 | ScanProsite:PS00434 |
| PANTHER:PTHR10015 | PANTHER:PTHR10015:SF164 | UniProt:Q8GYY1 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI000016244E |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : |
Description
HSFA3HSFA3 [Source:UniProtKB/TrEMBL;Acc:A0A178UHR4]
Coordinates
chr5:-:971142..974326
Molecular Weight (calculated)
46460.6 Da
IEP (calculated)
5.131
GRAVY (calculated)
-0.735
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPKKDAVSK PTPISVPVSR RSDIPGSLYV DTDMGFSGSP LPMPLDILQG NPIPPFLSKT FDLVDDPTLD PVISWGLTGA SFVVWDPLEF ARIILPRNFK
101: HNNFSSFVRQ LNTYGFRKID TDKWEFANEA FLRGKKHLLK NIHRRRSPQS NQTCCSSTSQ SQGSPTEVGG EIEKLRKERR ALMEEMVELQ QQSRGTARHV
201: DTVNQRLKAA EQRQKQLLSF LAKLFQNRGF LERLKNFKGK EKGGALGLEK ARKKFIKHHQ QPQDSPTGGE VVKYEADDWE RLLMYDEETE NTKGLGGMTS
301: SDPKGKNLMY PSEEEMSKPD YLMSFPSPEG LIKQEETTWS MGFDTTIPSF SNTDAWGNTM DYNDVSEFGF AAETTSDGLP DVCWEQFAAG ITETGFNWPT
401: GDDDDNTPMN DP
101: HNNFSSFVRQ LNTYGFRKID TDKWEFANEA FLRGKKHLLK NIHRRRSPQS NQTCCSSTSQ SQGSPTEVGG EIEKLRKERR ALMEEMVELQ QQSRGTARHV
201: DTVNQRLKAA EQRQKQLLSF LAKLFQNRGF LERLKNFKGK EKGGALGLEK ARKKFIKHHQ QPQDSPTGGE VVKYEADDWE RLLMYDEETE NTKGLGGMTS
301: SDPKGKNLMY PSEEEMSKPD YLMSFPSPEG LIKQEETTWS MGFDTTIPSF SNTDAWGNTM DYNDVSEFGF AAETTSDGLP DVCWEQFAAG ITETGFNWPT
401: GDDDDNTPMN DP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.