Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85486 | Canola | nucleus | 71.73 | 78.05 |
| Bra023584.1-P | Field mustard | nucleus | 71.52 | 77.83 |
| CDY38085 | Canola | nucleus | 70.27 | 76.99 |
| CDY16977 | Canola | nucleus | 65.49 | 71.43 |
| CDX69418 | Canola | nucleus | 69.85 | 68.99 |
| Bra008593.1-P | Field mustard | nucleus | 68.61 | 68.32 |
| AT3G02990.1 | Thale cress | nucleus | 63.83 | 65.6 |
| GSMUA_Achr4P04500_001 | Banana | nucleus | 48.23 | 52.85 |
| VIT_16s0039g01840.t01 | Wine grape | nucleus, plastid | 56.13 | 52.73 |
| KRH77766 | Soybean | nucleus | 47.61 | 49.35 |
| GSMUA_Achr3P27600_001 | Banana | nucleus | 42.0 | 47.42 |
| KRH27709 | Soybean | nucleus | 45.53 | 47.2 |
| PGSC0003DMT400008199 | Potato | nucleus | 48.02 | 46.95 |
| Solyc03g097120.2.1 | Tomato | nucleus | 47.82 | 46.84 |
| Os03t0854500-01 | Rice | nucleus | 48.86 | 46.44 |
| GSMUA_Achr4P17040_001 | Banana | nucleus | 46.99 | 46.41 |
| TraesCS5D01G553300.1 | Wheat | nucleus | 48.44 | 44.64 |
| TraesCS4A01G322300.1 | Wheat | nucleus | 48.02 | 44.34 |
| AT1G32330.1 | Thale cress | nucleus | 44.7 | 44.33 |
| TraesCS5B01G556200.1 | Wheat | nucleus | 48.65 | 44.23 |
| PGSC0003DMT400069550 | Potato | nucleus | 43.45 | 43.45 |
| Solyc06g072750.2.1 | Tomato | nucleus | 43.24 | 43.15 |
| EER93074 | Sorghum | nucleus | 46.78 | 42.69 |
| AT3G51910.1 | Thale cress | nucleus | 23.49 | 41.54 |
| Zm00001d034886_P001 | Maize | nucleus | 45.32 | 41.37 |
| HORVU5Hr1G123770.1 | Barley | nucleus | 48.23 | 40.42 |
| AT4G17750.1 | Thale cress | nucleus | 40.96 | 39.8 |
| Zm00001d012823_P001 | Maize | nucleus | 45.95 | 39.75 |
| AT2G26150.1 | Thale cress | nucleus | 28.07 | 39.13 |
| AT5G43840.1 | Thale cress | nucleus | 22.25 | 37.94 |
| AT3G63350.1 | Thale cress | nucleus | 20.37 | 34.75 |
| AT3G22830.1 | Thale cress | nucleus | 28.9 | 34.24 |
| AT5G45710.3 | Thale cress | nucleus | 22.87 | 31.88 |
| AT4G18880.1 | Thale cress | nucleus | 24.74 | 29.68 |
| AT5G54070.1 | Thale cress | nucleus | 20.37 | 29.61 |
| AT3G24520.1 | Thale cress | nucleus | 19.75 | 28.79 |
| AT5G03720.1 | Thale cress | nucleus | 23.08 | 26.94 |
| AT4G13980.1 | Thale cress | nucleus | 24.53 | 25.32 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | MapMan:26.4.2.1 | EntrezGene:831545 | UniProt:A0A178UCE2 | ProteinID:AED92343.1 |
| ProteinID:AED92344.1 | ArrayExpress:AT5G16820 | EnsemblPlantsGene:AT5G16820 | RefSeq:AT5G16820 | TAIR:AT5G16820 | RefSeq:AT5G16820-TAIR-G |
| EnsemblPlants:AT5G16820.2 | TAIR:AT5G16820.2 | Unigene:At.5364 | ProteinID:CAC01846.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009408 |
| GO:GO:0009628 | GO:GO:0009987 | GO:GO:0043565 | Symbol:HSF3 | InterPro:HSF_DNA-bd | InterPro:HSF_fam |
| InterPro:IPR036388 | RefSeq:NP_197184.2 | RefSeq:NP_850832.1 | UniProt:O81821 | ProteinID:OAO91345.1 | PFAM:PF00447 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00056 | ScanProsite:PS00434 | PANTHER:PTHR10015 |
| PANTHER:PTHR10015:SF162 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI000012CCEA | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf |
| EMBL:Y14068 | SEG:seg | : | : | : | : |
Description
HSFA1BHeat stress transcription factor A-1b [Source:UniProtKB/Swiss-Prot;Acc:O81821]
Coordinates
chr5:+:5530195..5532889
Molecular Weight (calculated)
53579.4 Da
IEP (calculated)
4.519
GRAVY (calculated)
-0.685
Length
481 amino acids
Sequence
(BLAST)
(BLAST)
001: MESVPESVPS PNSNTPSIPP PVNSVPPFLS KTYDMVDDPL TNEVVSWSSG NNSFVVWSAP EFSKVLLPKY FKHNNFSSFV RQLNTYGFRK VDPDRWEFAN
101: EGFLRGRKQL LKSIVRRKPS HVQQNQQQTQ VQSSSVGACV EVGKFGIEEE VERLKRDKNV LMQELVRLRQ QQQATENQLQ NVGQKVQVME QRQQQMMSFL
201: AKAVQSPGFL NQLVQQNNND GNRQIPGSNK KRRLPVDEQE NRGDNVANGL NRQIVRYQPS INEAAQNMLR QFLNTSTSPR YESVSNNPDS FLLGDVPSST
301: SVDNGNPSSR VSGVTLAEFS PNTVQSATNQ VPEASLAHHP QAGLVQPNIG QSPAQGAAPA DSWSPEFDLV GCETDSGECF DPIMAVLDES EGDAISPEGE
401: GKMNELLEGV PKLPGIQDPF WEQFFSVELP AIADTDDILS GSVENNDLVL EQEPNEWTRN EQQMKYLTEQ MGLLSSEAQR K
101: EGFLRGRKQL LKSIVRRKPS HVQQNQQQTQ VQSSSVGACV EVGKFGIEEE VERLKRDKNV LMQELVRLRQ QQQATENQLQ NVGQKVQVME QRQQQMMSFL
201: AKAVQSPGFL NQLVQQNNND GNRQIPGSNK KRRLPVDEQE NRGDNVANGL NRQIVRYQPS INEAAQNMLR QFLNTSTSPR YESVSNNPDS FLLGDVPSST
301: SVDNGNPSSR VSGVTLAEFS PNTVQSATNQ VPEASLAHHP QAGLVQPNIG QSPAQGAAPA DSWSPEFDLV GCETDSGECF DPIMAVLDES EGDAISPEGE
401: GKMNELLEGV PKLPGIQDPF WEQFFSVELP AIADTDDILS GSVENNDLVL EQEPNEWTRN EQQMKYLTEQ MGLLSSEAQR K
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.