Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008593.1-P | Field mustard | nucleus | 98.15 | 98.96 |
| CDY16977 | Canola | nucleus | 83.16 | 91.84 |
| CDX85486 | Canola | nucleus | 66.32 | 73.08 |
| CDY38085 | Canola | nucleus | 64.27 | 71.3 |
| AT5G16820.2 | Thale cress | nucleus | 68.99 | 69.85 |
| CDY43158 | Canola | nucleus | 38.6 | 61.44 |
| CDY28731 | Canola | nucleus | 51.13 | 57.11 |
| CDY58547 | Canola | nucleus | 52.77 | 56.61 |
| CDX74228 | Canola | nucleus | 51.33 | 54.95 |
| CDX92026 | Canola | nucleus | 49.9 | 54.24 |
| CDY43157 | Canola | cytosol | 9.45 | 51.11 |
| GSMUA_Achr4P04500_001 | Banana | nucleus | 43.12 | 47.84 |
| VIT_16s0039g01840.t01 | Wine grape | nucleus, plastid | 48.46 | 46.09 |
| KRH77766 | Soybean | nucleus | 41.48 | 43.53 |
| PGSC0003DMT400008199 | Potato | nucleus | 43.33 | 42.89 |
| GSMUA_Achr3P27600_001 | Banana | nucleus | 37.37 | 42.72 |
| GSMUA_Achr4P17040_001 | Banana | nucleus | 42.71 | 42.71 |
| CDX78797 | Canola | nucleus | 37.37 | 42.33 |
| Solyc03g097120.2.1 | Tomato | nucleus | 42.51 | 42.16 |
| KRH27709 | Soybean | nucleus | 39.84 | 41.81 |
| CDY60785 | Canola | nucleus | 37.17 | 41.42 |
| Os03t0854500-01 | Rice | nucleus | 41.68 | 40.12 |
| CDX95313 | Canola | nucleus | 21.77 | 39.55 |
| TraesCS5D01G553300.1 | Wheat | nucleus | 42.3 | 39.46 |
| PGSC0003DMT400069550 | Potato | nucleus | 38.81 | 39.29 |
| TraesCS4A01G322300.1 | Wheat | nucleus | 41.89 | 39.16 |
| TraesCS5B01G556200.1 | Wheat | nucleus | 42.3 | 38.94 |
| Solyc06g072750.2.1 | Tomato | nucleus | 38.4 | 38.8 |
| CDX90626 | Canola | nucleus | 21.36 | 38.66 |
| CDY14893 | Canola | nucleus | 20.74 | 38.55 |
| EER93074 | Sorghum | nucleus | 41.68 | 38.52 |
| CDY29054 | Canola | nucleus | 20.94 | 38.49 |
| CDX93842 | Canola | nucleus | 38.19 | 38.19 |
| CDY01288 | Canola | nucleus | 37.99 | 37.6 |
| Zm00001d034886_P001 | Maize | nucleus | 40.45 | 37.38 |
| CDY21503 | Canola | nucleus | 26.49 | 36.96 |
| CDX90627 | Canola | nucleus | 21.36 | 36.24 |
| CDX94887 | Canola | nucleus | 19.92 | 35.93 |
| CDX76693 | Canola | nucleus | 20.94 | 35.79 |
| CDY11470 | Canola | nucleus | 20.94 | 35.79 |
| HORVU5Hr1G123770.1 | Barley | nucleus | 42.09 | 35.71 |
| Zm00001d012823_P001 | Maize | nucleus | 40.45 | 35.43 |
| CDY13041 | Canola | nucleus | 21.97 | 34.85 |
| CDY34229 | Canola | nucleus | 26.9 | 34.56 |
| CDY10674 | Canola | nucleus | 27.31 | 34.19 |
| CDY46606 | Canola | nucleus | 26.69 | 33.94 |
| CDX83217 | Canola | nucleus | 25.87 | 33.78 |
| CDY46607 | Canola | nucleus | 25.67 | 33.69 |
| CDY23108 | Canola | nucleus | 23.41 | 33.53 |
| CDY10311 | Canola | nucleus | 26.69 | 33.51 |
| CDY09259 | Canola | nucleus | 24.23 | 32.6 |
| CDX94884 | Canola | nucleus | 19.1 | 32.4 |
| CDX92958 | Canola | nucleus | 22.79 | 32.27 |
| CDY44649 | Canola | nucleus | 31.42 | 32.21 |
| CDX99415 | Canola | nucleus | 25.05 | 31.77 |
| CDX76506 | Canola | nucleus | 23.41 | 31.15 |
| CDX93024 | Canola | nucleus | 19.51 | 31.05 |
| CDY01562 | Canola | nucleus | 24.44 | 30.28 |
| CDY69818 | Canola | nucleus | 24.23 | 30.26 |
| CDX77420 | Canola | nucleus | 19.51 | 30.25 |
| CDY39545 | Canola | nucleus | 19.51 | 30.25 |
| CDX70290 | Canola | nucleus | 22.38 | 30.03 |
| CDY50608 | Canola | nucleus | 19.3 | 29.84 |
| CDY10361 | Canola | nucleus | 23.2 | 28.18 |
| CDY12723 | Canola | nucleus | 24.44 | 25.05 |
| CDY01180 | Canola | nucleus | 23.2 | 23.69 |
| CDX78902 | Canola | nucleus | 23.2 | 21.86 |
| CDX84097 | Canola | nucleus | 10.88 | 19.7 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | MapMan:26.4.2.1 | GO:A0A078C2Z4 | EnsemblPlants:CDX69418 | ProteinID:CDX69418 |
| ProteinID:CDX69418.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00135387001 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 |
| ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF162 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0004EE76CD |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : |
Description
BnaA10g17670D
Coordinates
chrLK031790:-:129067..131301
Molecular Weight (calculated)
53722.9 Da
IEP (calculated)
4.652
GRAVY (calculated)
-0.561
Length
487 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPVLEPAPY VNSNPLPIPP PVNSVPPFLS KTYDMVDDPS TNEVVSWSSG NNSFVVWDVP EFSKVFLPKY FKHNNFSSFV RQLNTYGFRK VDPDRWEFAN
101: EGFLRDQKQL LKGITRRKSS HVQQQTQVQN SSLAPCVEVG KFGIAEEVER LKRDKNVLMH QQQATENQLK DAVQKVQAME QRQQQMMSFL AKAVQSPGFL
201: NQLVAQQSND GNRQIQGSSN KKRRLPGEEA NDVDRQIVKY QPSINEAAQT MLRQFLNMSS SPESESVPNN PGSFSPSSLN SSNTVSGVTL PEVSPDSAHS
301: AAMNQVPEAG LAHHPQAGLV HPNLGPSPAA ATWSPESECK TGNGECLDPI MAALGGSLEM EGDAVSPEGE GEVKELLVPQ LPGVQDPFWE QFFADEAPVS
401: GETDETILGS VENNDLAMEQ ELREWTRDQQ QVNHITEQMG FLSSETHGGK NEKHVLCIIV LPFVFHRCIF FRGGCEGDMN GGGGDIS
101: EGFLRDQKQL LKGITRRKSS HVQQQTQVQN SSLAPCVEVG KFGIAEEVER LKRDKNVLMH QQQATENQLK DAVQKVQAME QRQQQMMSFL AKAVQSPGFL
201: NQLVAQQSND GNRQIQGSSN KKRRLPGEEA NDVDRQIVKY QPSINEAAQT MLRQFLNMSS SPESESVPNN PGSFSPSSLN SSNTVSGVTL PEVSPDSAHS
301: AAMNQVPEAG LAHHPQAGLV HPNLGPSPAA ATWSPESECK TGNGECLDPI MAALGGSLEM EGDAVSPEGE GEVKELLVPQ LPGVQDPFWE QFFADEAPVS
401: GETDETILGS VENNDLAMEQ ELREWTRDQQ QVNHITEQMG FLSSETHGGK NEKHVLCIIV LPFVFHRCIF FRGGCEGDMN GGGGDIS
001: MESVPESVPS PNSNTPSIPP PVNSVPPFLS KTYDMVDDPL TNEVVSWSSG NNSFVVWSAP EFSKVLLPKY FKHNNFSSFV RQLNTYGFRK VDPDRWEFAN
101: EGFLRGRKQL LKSIVRRKPS HVQQNQQQTQ VQSSSVGACV EVGKFGIEEE VERLKRDKNV LMQELVRLRQ QQQATENQLQ NVGQKVQVME QRQQQMMSFL
201: AKAVQSPGFL NQLVQQNNND GNRQIPGSNK KRRLPVDEQE NRGDNVANGL NRQIVRYQPS INEAAQNMLR QFLNTSTSPR YESVSNNPDS FLLGDVPSST
301: SVDNGNPSSR VSGVTLAEFS PNTVQSATNQ VPEASLAHHP QAGLVQPNIG QSPAQGAAPA DSWSPEFDLV GCETDSGECF DPIMAVLDES EGDAISPEGE
401: GKMNELLEGV PKLPGIQDPF WEQFFSVELP AIADTDDILS GSVENNDLVL EQEPNEWTRN EQQMKYLTEQ MGLLSSEAQR K
101: EGFLRGRKQL LKSIVRRKPS HVQQNQQQTQ VQSSSVGACV EVGKFGIEEE VERLKRDKNV LMQELVRLRQ QQQATENQLQ NVGQKVQVME QRQQQMMSFL
201: AKAVQSPGFL NQLVQQNNND GNRQIPGSNK KRRLPVDEQE NRGDNVANGL NRQIVRYQPS INEAAQNMLR QFLNTSTSPR YESVSNNPDS FLLGDVPSST
301: SVDNGNPSSR VSGVTLAEFS PNTVQSATNQ VPEASLAHHP QAGLVQPNIG QSPAQGAAPA DSWSPEFDLV GCETDSGECF DPIMAVLDES EGDAISPEGE
401: GKMNELLEGV PKLPGIQDPF WEQFFSVELP AIADTDDILS GSVENNDLVL EQEPNEWTRN EQQMKYLTEQ MGLLSSEAQR K
Arabidopsis Description
HSFA1BHeat stress transcription factor A-1b [Source:UniProtKB/Swiss-Prot;Acc:O81821]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.