Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43157 | Canola | cytosol | 19.72 | 95.56 |
| Bra032023.1-P | Field mustard | nucleus | 94.95 | 90.79 |
| CDY43158 | Canola | nucleus | 61.24 | 87.25 |
| CDY58547 | Canola | nucleus | 77.75 | 74.67 |
| AT3G02990.1 | Thale cress | nucleus | 79.59 | 74.15 |
| CDX74228 | Canola | nucleus | 76.61 | 73.41 |
| CDX92026 | Canola | nucleus | 71.79 | 69.87 |
| CDX85486 | Canola | nucleus | 58.95 | 58.14 |
| CDY38085 | Canola | nucleus | 56.42 | 56.04 |
| CDY16977 | Canola | nucleus | 55.73 | 55.1 |
| CDX69418 | Canola | nucleus | 57.11 | 51.13 |
| GSMUA_Achr4P04500_001 | Banana | nucleus | 44.04 | 43.74 |
| VIT_16s0039g01840.t01 | Wine grape | nucleus, plastid | 50.69 | 43.16 |
| GSMUA_Achr3P27600_001 | Banana | nucleus | 41.05 | 42.02 |
| KRH77766 | Soybean | nucleus | 43.81 | 41.16 |
| KRH27709 | Soybean | nucleus | 43.35 | 40.73 |
| CDX78797 | Canola | nucleus | 38.99 | 39.53 |
| PGSC0003DMT400008199 | Potato | nucleus | 44.27 | 39.23 |
| GSMUA_Achr4P17040_001 | Banana | nucleus | 43.81 | 39.22 |
| CDY60785 | Canola | nucleus | 39.22 | 39.13 |
| Solyc03g097120.2.1 | Tomato | nucleus | 43.35 | 38.49 |
| Os03t0854500-01 | Rice | nucleus | 44.27 | 38.14 |
| CDX95313 | Canola | nucleus | 23.17 | 37.69 |
| TraesCS5D01G553300.1 | Wheat | nucleus | 44.27 | 36.97 |
| TraesCS4A01G322300.1 | Wheat | nucleus | 44.04 | 36.85 |
| CDY29054 | Canola | nucleus | 22.25 | 36.6 |
| TraesCS5B01G556200.1 | Wheat | nucleus | 44.27 | 36.48 |
| CDX90626 | Canola | nucleus | 22.48 | 36.43 |
| EER93074 | Sorghum | nucleus | 43.81 | 36.24 |
| Zm00001d034886_P001 | Maize | nucleus | 43.58 | 36.05 |
| CDY14893 | Canola | nucleus | 21.33 | 35.5 |
| PGSC0003DMT400069550 | Potato | nucleus | 38.76 | 35.14 |
| Solyc06g072750.2.1 | Tomato | nucleus | 38.07 | 34.44 |
| CDY11470 | Canola | nucleus | 22.48 | 34.39 |
| CDX93842 | Canola | nucleus | 38.3 | 34.29 |
| CDX90627 | Canola | nucleus | 22.48 | 34.15 |
| CDX76693 | Canola | nucleus | 22.25 | 34.04 |
| Zm00001d012823_P001 | Maize | nucleus | 43.12 | 33.81 |
| CDY01288 | Canola | nucleus | 38.07 | 33.74 |
| CDY21503 | Canola | nucleus | 26.83 | 33.52 |
| CDX94887 | Canola | nucleus | 20.64 | 33.33 |
| HORVU5Hr1G123770.1 | Barley | nucleus | 43.81 | 33.28 |
| CDY34229 | Canola | nucleus | 28.44 | 32.72 |
| CDY09259 | Canola | nucleus | 26.83 | 32.32 |
| CDY13041 | Canola | nucleus | 22.48 | 31.92 |
| CDX94884 | Canola | nucleus | 20.87 | 31.71 |
| CDX76506 | Canola | nucleus | 26.61 | 31.69 |
| CDY10674 | Canola | nucleus | 28.21 | 31.62 |
| CDY46607 | Canola | nucleus | 26.83 | 31.54 |
| CDX93024 | Canola | nucleus | 21.79 | 31.05 |
| CDY10311 | Canola | nucleus | 27.52 | 30.93 |
| CDY23108 | Canola | nucleus | 24.08 | 30.88 |
| CDY46606 | Canola | nucleus | 27.06 | 30.81 |
| CDY39545 | Canola | nucleus | 22.02 | 30.57 |
| CDX83217 | Canola | nucleus | 26.15 | 30.56 |
| CDX99415 | Canola | nucleus | 26.83 | 30.47 |
| CDX77420 | Canola | nucleus | 21.79 | 30.25 |
| CDY50608 | Canola | nucleus | 21.79 | 30.16 |
| CDY01562 | Canola | nucleus | 26.61 | 29.52 |
| CDY69818 | Canola | nucleus | 26.38 | 29.49 |
| CDX92958 | Canola | nucleus | 22.71 | 28.78 |
| CDY44649 | Canola | nucleus | 31.19 | 28.63 |
| CDX70290 | Canola | nucleus | 23.62 | 28.37 |
| CDY10361 | Canola | nucleus | 24.08 | 26.18 |
| CDY12723 | Canola | nucleus | 28.21 | 25.89 |
| CDY01180 | Canola | nucleus | 27.52 | 25.16 |
| CDX84097 | Canola | nucleus | 13.99 | 22.68 |
| CDX78902 | Canola | nucleus | 25.0 | 21.08 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | GO:A0A078GTA2 | UniProt:A0A078GTA2 | EnsemblPlants:CDY28731 | ProteinID:CDY28731 |
| ProteinID:CDY28731.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00041369001 |
| InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 | ScanProsite:PS00434 |
| PANTHER:PTHR10015 | PANTHER:PTHR10015:SF162 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0004EEC20E | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : | : |
Description
BnaCnng06170DBnaCnng06170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTA2]
Coordinates
chrLK032225:+:455960..458483
Molecular Weight (calculated)
48482.7 Da
IEP (calculated)
4.940
GRAVY (calculated)
-0.549
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSNCESSTT VVSSIPPFLS KTYDMVDDPL TDEVVSWSSG NKSFVVWYVP EFSILFLPKY FKHNNFSSFV RQLNTYGFRK VDPDRWEFAN EGFIRGQKQL
101: LKSIVRRKPS QVQPPQQPQA QHSSRDKNVL TQELVGLRQQ QQVTEHHLQN VGQKVHVMEQ RQQQMMSFLA KAVQSPGFLN QFSQQNNEGN NQHVSEGNKK
201: RRLPVEEQKY AGGYGANGLS CQIVRYQSSM NEAADTMLEQ IHNMSNPHSR QEPLSNNHGS FLLGDVPNIS DNGSSTNGAS GVTLADVSSN PAINYHVPCE
301: ANQILEGSLP YAQVDLLAPN QGAAYGSSNS DVVGCETDNE ECLDPIMAVL AGSMGLEANA VNELLPGVQD PLWEQFFGER PVIGDTEELV SGSVDNGLIM
401: EQLELQSNLR NVLSSNQQMN HLTEQMGFLT SDALRK
101: LKSIVRRKPS QVQPPQQPQA QHSSRDKNVL TQELVGLRQQ QQVTEHHLQN VGQKVHVMEQ RQQQMMSFLA KAVQSPGFLN QFSQQNNEGN NQHVSEGNKK
201: RRLPVEEQKY AGGYGANGLS CQIVRYQSSM NEAADTMLEQ IHNMSNPHSR QEPLSNNHGS FLLGDVPNIS DNGSSTNGAS GVTLADVSSN PAINYHVPCE
301: ANQILEGSLP YAQVDLLAPN QGAAYGSSNS DVVGCETDNE ECLDPIMAVL AGSMGLEANA VNELLPGVQD PLWEQFFGER PVIGDTEELV SGSVDNGLIM
401: EQLELQSNLR NVLSSNQQMN HLTEQMGFLT SDALRK
001: MGTVCESVAT AKSSTAVMSS IPPFLSKTYD MVDDPLTDDV VSWSSGNNSF VVWNVPEFAK QFLPKYFKHN NFSSFVRQLN TYGFRKVDPD RWEFANEGFL
101: RGQKQILKSI VRRKPAQVQP PQQPQVQHSS VGACVEVGKF GLEEEVERLQ RDKNVLMQEL VRLRQQQQVT EHHLQNVGQK VHVMEQRQQQ MMSFLAKAVQ
201: SPGFLNQFSQ QSNEANQHIS ESNKKRRLPV EDQMNSGSHG VNGLSRQIVR YQSSMNDATN TMLQQIQQMS NAPSHESLSS NNGSFLLGDV PNSNISDNGS
301: SSNGSPEVTL ADVSSIPAGF YPAMKYHEPC ETNQVMETNL PFSQGDLLPP TQGAAASGSS SSDLVGCETD NGECLDPIMA VLDGALELEA DTLNELLPEV
401: QDSFWEQFIG ESPVIGETDE LISGSVENEL ILEQLELQST LSNVWSKNQQ MNHLTEQMGL LTSDALRK
101: RGQKQILKSI VRRKPAQVQP PQQPQVQHSS VGACVEVGKF GLEEEVERLQ RDKNVLMQEL VRLRQQQQVT EHHLQNVGQK VHVMEQRQQQ MMSFLAKAVQ
201: SPGFLNQFSQ QSNEANQHIS ESNKKRRLPV EDQMNSGSHG VNGLSRQIVR YQSSMNDATN TMLQQIQQMS NAPSHESLSS NNGSFLLGDV PNSNISDNGS
301: SSNGSPEVTL ADVSSIPAGF YPAMKYHEPC ETNQVMETNL PFSQGDLLPP TQGAAASGSS SSDLVGCETD NGECLDPIMA VLDGALELEA DTLNELLPEV
401: QDSFWEQFIG ESPVIGETDE LISGSVENEL ILEQLELQST LSNVWSKNQQ MNHLTEQMGL LTSDALRK
Arabidopsis Description
HSFA1EHeat stress transcription factor A-1e [Source:UniProtKB/Swiss-Prot;Acc:Q9SCW5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.