Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035507.1-P | Field mustard | nucleus | 77.26 | 85.95 |
| CDX84097 | Canola | nucleus | 44.84 | 79.18 |
| CDY01288 | Canola | nucleus | 70.11 | 67.68 |
| CDX93842 | Canola | nucleus | 69.26 | 67.56 |
| AT1G32330.1 | Thale cress | nucleus | 62.74 | 61.44 |
| CDY43158 | Canola | nucleus | 29.05 | 45.1 |
| VIT_02s0012g01810.t01 | Wine grape | nucleus | 45.05 | 43.15 |
| CDX78797 | Canola | nucleus | 36.63 | 40.47 |
| KRH74387 | Soybean | nucleus | 41.68 | 40.41 |
| KRH39566 | Soybean | nucleus | 42.11 | 40.0 |
| KRH07474 | Soybean | nucleus | 42.74 | 39.8 |
| CDY60785 | Canola | nucleus | 36.21 | 39.36 |
| PGSC0003DMT400046000 | Potato | nucleus | 41.47 | 38.78 |
| GSMUA_Achr4P04500_001 | Banana | nucleus | 35.79 | 38.72 |
| Solyc08g005170.2.1 | Tomato | nucleus | 42.32 | 38.14 |
| Os03t0854500-01 | Rice | nucleus | 38.95 | 36.56 |
| CDY58547 | Canola | nucleus | 33.89 | 35.46 |
| GSMUA_Achr4P17040_001 | Banana | nucleus | 36.0 | 35.11 |
| CDX95313 | Canola | nucleus | 19.79 | 35.07 |
| CDX92026 | Canola | nucleus | 33.05 | 35.04 |
| EER93074 | Sorghum | nucleus | 38.32 | 34.54 |
| CDY14893 | Canola | nucleus | 18.95 | 34.35 |
| CDX90626 | Canola | nucleus | 19.37 | 34.2 |
| Zm00001d034886_P001 | Maize | nucleus | 37.89 | 34.16 |
| CDX74228 | Canola | nucleus | 32.63 | 34.07 |
| TraesCS4A01G322300.1 | Wheat | nucleus | 37.26 | 33.97 |
| CDY29054 | Canola | nucleus | 18.95 | 33.96 |
| TraesCS5D01G553300.1 | Wheat | nucleus | 37.05 | 33.72 |
| CDY38085 | Canola | nucleus | 31.16 | 33.71 |
| CDX85486 | Canola | nucleus | 31.37 | 33.71 |
| Solyc08g076590.2.1 | Tomato | nucleus | 34.74 | 33.67 |
| TraesCS5B01G556200.1 | Wheat | nucleus | 37.05 | 33.27 |
| PGSC0003DMT400038381 | Potato | nucleus | 34.74 | 33.13 |
| GSMUA_Achr3P27600_001 | Banana | nucleus | 29.68 | 33.1 |
| CDY21503 | Canola | nucleus | 23.37 | 31.81 |
| Zm00001d012823_P001 | Maize | nucleus | 36.84 | 31.47 |
| CDX69418 | Canola | nucleus | 32.21 | 31.42 |
| CDX90627 | Canola | nucleus | 18.95 | 31.36 |
| CDY28731 | Canola | nucleus | 28.63 | 31.19 |
| HORVU5Hr1G123770.1 | Barley | nucleus | 36.84 | 30.49 |
| CDY16977 | Canola | nucleus | 28.21 | 30.39 |
| CDX76693 | Canola | nucleus | 17.89 | 29.82 |
| CDY34229 | Canola | nucleus | 23.58 | 29.55 |
| CDX83217 | Canola | nucleus | 22.95 | 29.22 |
| CDY11470 | Canola | nucleus | 17.47 | 29.12 |
| CDY46606 | Canola | nucleus | 23.16 | 28.72 |
| CDY10674 | Canola | nucleus | 23.37 | 28.53 |
| CDY46607 | Canola | nucleus | 21.89 | 28.03 |
| CDY10311 | Canola | nucleus | 22.74 | 27.84 |
| CDX94887 | Canola | nucleus | 15.79 | 27.78 |
| CDX94884 | Canola | nucleus | 15.16 | 25.09 |
| CDX70290 | Canola | nucleus | 19.16 | 25.07 |
| CDY13041 | Canola | nucleus | 16.0 | 24.76 |
| CDX92958 | Canola | nucleus | 17.89 | 24.71 |
| CDX93024 | Canola | nucleus | 15.79 | 24.51 |
| CDX77420 | Canola | nucleus | 15.79 | 23.89 |
| CDY50608 | Canola | nucleus | 15.79 | 23.81 |
| CDY39545 | Canola | nucleus | 15.58 | 23.57 |
| CDY10361 | Canola | nucleus | 19.58 | 23.19 |
| CDY23108 | Canola | nucleus | 16.42 | 22.94 |
| CDY09259 | Canola | nucleus | 16.42 | 21.55 |
| CDX76506 | Canola | nucleus | 15.79 | 20.49 |
| CDX99415 | Canola | nucleus | 16.42 | 20.31 |
| CDY12723 | Canola | nucleus | 19.58 | 19.58 |
| CDY69818 | Canola | nucleus | 15.79 | 19.23 |
| CDY01562 | Canola | nucleus | 15.79 | 19.08 |
| CDY01180 | Canola | nucleus | 18.74 | 18.66 |
| CDX78902 | Canola | nucleus | 16.21 | 14.89 |
| CDY43157 | Canola | cytosol | 1.47 | 7.78 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | MapMan:26.4.2.1 | GO:A0A078I591 | UniProt:A0A078I591 | EnsemblPlants:CDY44649 |
| ProteinID:CDY44649 | ProteinID:CDY44649.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00080614001 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 |
| PANTHER:PTHR10015 | PANTHER:PTHR10015:SF162 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0004EE08EF | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : | : |
Description
BnaA08g06910DBnaA08g06910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I591]
Coordinates
chrLK032598:-:13818..26210
Molecular Weight (calculated)
53048.5 Da
IEP (calculated)
4.363
GRAVY (calculated)
-0.475
Length
475 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGNRSSTI DEAESGGGSV AMESKEIPQP QPVEVLSANA PPPFLSKTYD MVDDPATDPI VSWSSNNNSF LPTFIPSFSY LISADCLDSK FQWEFLSSFL
101: VWTIRNKQLN LFGFRKVDLY RWEFANEVFL RVGNKHLLKT ITRRKPAHVH GHGQQHSNGQ NPSVSSCVEV GKFGLEEEVE RLKRDKKVLM QELVRLRQQQ
201: QSTDNNLQRM VQRLQGMENR QQQLMSFLAK AVQSPHFLSQ FLQQQNQQSE SNGIVSSKDS ASPDGQIVKY QPPMHEQAKA MLKKLMKMEP YKTGDDGFHL
301: GDGTSTTTEM EISSNNVSGI TLQEMPTASD IQSSSLTGAT PENVTVAESP TPEEAIPSPD VLSLPEFASI LPKKTTEMPS GNFMEPNMED FSYFLDSDLF
401: IDGDFPFDID DIPSDPDLEP SVDKYASLLE DILMSSPLPD DMDVTPCLID SLPPLDWIYI TQDQMPSPMS HLASF
101: VWTIRNKQLN LFGFRKVDLY RWEFANEVFL RVGNKHLLKT ITRRKPAHVH GHGQQHSNGQ NPSVSSCVEV GKFGLEEEVE RLKRDKKVLM QELVRLRQQQ
201: QSTDNNLQRM VQRLQGMENR QQQLMSFLAK AVQSPHFLSQ FLQQQNQQSE SNGIVSSKDS ASPDGQIVKY QPPMHEQAKA MLKKLMKMEP YKTGDDGFHL
301: GDGTSTTTEM EISSNNVSGI TLQEMPTASD IQSSSLTGAT PENVTVAESP TPEEAIPSPD VLSLPEFASI LPKKTTEMPS GNFMEPNMED FSYFLDSDLF
401: IDGDFPFDID DIPSDPDLEP SVDKYASLLE DILMSSPLPD DMDVTPCLID SLPPLDWIYI TQDQMPSPMS HLASF
001: MDVSKVTTSD GGGDSMETKP SPQPQPAAIL SSNAPPPFLS KTYDMVDDHN TDSIVSWSAN NNSFIVWKPP EFARDLLPKN FKHNNFSSFV RQLNTYGFRK
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SR
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SR
Arabidopsis Description
HSFA1DHeat stress transcription factor A-1d [Source:UniProtKB/Swiss-Prot;Acc:Q9LQM7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.