Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012828.1-P | Field mustard | nucleus | 98.14 | 98.14 |
| CDY29054 | Canola | nucleus | 95.54 | 96.98 |
| CDX95313 | Canola | nucleus | 84.01 | 84.33 |
| CDX90627 | Canola | nucleus | 86.62 | 81.18 |
| AT3G51910.1 | Thale cress | nucleus | 76.21 | 75.37 |
| CDX76693 | Canola | nucleus | 61.34 | 57.89 |
| CDY11470 | Canola | nucleus | 61.34 | 57.89 |
| VIT_00s0179g00150.t01 | Wine grape | nucleus | 57.25 | 42.66 |
| KRH32059 | Soybean | nucleus | 53.9 | 42.52 |
| KRG95588 | Soybean | nucleus | 57.99 | 42.16 |
| PGSC0003DMT400049795 | Potato | nucleus | 55.76 | 41.67 |
| Solyc09g065660.2.1 | Tomato | nucleus | 57.62 | 41.67 |
| PGSC0003DMT400049793 | Potato | nucleus | 56.13 | 41.48 |
| KRH67266 | Soybean | nucleus | 57.99 | 40.41 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 43.12 | 40.0 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 45.72 | 39.94 |
| TraesCS4B01G278100.1 | Wheat | nucleus | 50.56 | 39.88 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 50.93 | 39.83 |
| TraesCS4D01G276500.1 | Wheat | nucleus | 50.19 | 39.59 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 50.19 | 39.59 |
| Zm00001d032923_P002 | Maize | nucleus | 50.56 | 38.1 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 47.21 | 38.02 |
| Os10t0419300-00 | Rice | nucleus | 50.56 | 37.99 |
| CDX94887 | Canola | nucleus | 37.92 | 37.78 |
| EER94213 | Sorghum | nucleus | 50.56 | 37.57 |
| Zm00001d027757_P001 | Maize | nucleus | 51.67 | 36.2 |
| EER95463 | Sorghum | nucleus | 52.42 | 36.06 |
| Os03t0161900-02 | Rice | nucleus | 50.56 | 35.88 |
| CDY14893 | Canola | nucleus | 34.94 | 35.88 |
| HORVU1Hr1G083420.2 | Barley | nucleus | 49.44 | 35.75 |
| CDY10674 | Canola | nucleus | 51.3 | 35.48 |
| TraesCS1B01G396000.1 | Wheat | nucleus | 47.21 | 35.47 |
| CDY34229 | Canola | nucleus | 49.44 | 35.09 |
| TraesCS1A01G375600.2 | Wheat | nucleus | 47.96 | 35.05 |
| TraesCS1D01G382900.1 | Wheat | nucleus | 47.21 | 34.89 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 42.75 | 34.53 |
| CDY46607 | Canola | nucleus | 47.58 | 34.5 |
| CDX94884 | Canola | nucleus | 36.8 | 34.49 |
| CDY10311 | Canola | nucleus | 49.44 | 34.28 |
| CDY46606 | Canola | nucleus | 48.33 | 33.94 |
| EER93298 | Sorghum | nucleus | 42.75 | 33.92 |
| TraesCS5A01G437900.1 | Wheat | nucleus | 43.49 | 33.81 |
| TraesCS5D01G445100.1 | Wheat | nucleus | 43.49 | 33.62 |
| TraesCS5B01G440700.1 | Wheat | nucleus | 43.87 | 33.43 |
| CDY21503 | Canola | nucleus | 43.12 | 33.24 |
| Zm00001d018941_P001 | Maize | nucleus | 45.35 | 32.53 |
| EER95940 | Sorghum | nucleus | 44.98 | 32.53 |
| Os07t0178600-01 | Rice | nucleus | 44.98 | 32.53 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 44.61 | 32.34 |
| TraesCS5D01G393200.1 | Wheat | nucleus | 44.61 | 31.83 |
| Zm00001d033987_P001 | Maize | nucleus | 43.87 | 31.81 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 43.87 | 31.72 |
| EER90889 | Sorghum | nucleus | 43.49 | 31.54 |
| TraesCS2B01G105100.1 | Wheat | nucleus | 46.84 | 31.11 |
| CDX83217 | Canola | nucleus | 42.38 | 30.56 |
| CDX92958 | Canola | nucleus | 39.03 | 30.52 |
| CDY43158 | Canola | nucleus | 34.57 | 30.39 |
| HORVU2Hr1G014590.1 | Barley | nucleus | 47.21 | 30.38 |
| TraesCS2D01G087400.1 | Wheat | nucleus | 46.47 | 30.34 |
| TraesCS2A01G089300.1 | Wheat | nucleus | 46.47 | 30.27 |
| TraesCS3A01G405200.1 | Wheat | nucleus | 44.24 | 29.97 |
| CDY13041 | Canola | nucleus | 31.23 | 27.36 |
| TraesCS3B01G438900.1 | Wheat | nucleus | 43.87 | 27.25 |
| CDY09259 | Canola | nucleus | 34.57 | 25.69 |
| CDX78797 | Canola | nucleus | 40.89 | 25.58 |
| CDX93024 | Canola | nucleus | 29.0 | 25.49 |
| CDX76506 | Canola | nucleus | 34.57 | 25.41 |
| CDY60785 | Canola | nucleus | 41.26 | 25.4 |
| CDY50608 | Canola | nucleus | 29.74 | 25.4 |
| CDX70290 | Canola | nucleus | 34.2 | 25.34 |
| CDX77420 | Canola | nucleus | 29.37 | 25.16 |
| CDY39545 | Canola | nucleus | 29.37 | 25.16 |
| CDY23108 | Canola | nucleus | 31.23 | 24.71 |
| CDX99415 | Canola | nucleus | 34.94 | 24.48 |
| CDY69818 | Canola | nucleus | 35.32 | 24.36 |
| CDY01562 | Canola | nucleus | 34.94 | 23.92 |
| CDY10361 | Canola | nucleus | 35.32 | 23.69 |
| CDX92026 | Canola | nucleus | 39.41 | 23.66 |
| CDX85486 | Canola | nucleus | 38.66 | 23.53 |
| CDY38085 | Canola | nucleus | 38.29 | 23.46 |
| CDY16977 | Canola | nucleus | 37.92 | 23.13 |
| CDY58547 | Canola | nucleus | 39.03 | 23.13 |
| CDY28731 | Canola | nucleus | 36.43 | 22.48 |
| HORVU5Hr1G105770.2 | Barley | nucleus | 43.49 | 22.46 |
| CDX74228 | Canola | nucleus | 37.92 | 22.42 |
| CDX93842 | Canola | nucleus | 39.78 | 21.97 |
| CDY01288 | Canola | nucleus | 39.78 | 21.75 |
| CDX69418 | Canola | nucleus | 38.66 | 21.36 |
| CDY12723 | Canola | nucleus | 34.94 | 19.79 |
| CDY44649 | Canola | nucleus | 34.2 | 19.37 |
| CDY01180 | Canola | nucleus | 34.2 | 19.29 |
| Zm00001d034433_P003 | Maize | nucleus | 42.75 | 18.52 |
| CDX78902 | Canola | nucleus | 34.2 | 17.8 |
| CDX84097 | Canola | nucleus | 5.58 | 5.58 |
| CDY43157 | Canola | cytosol | 1.86 | 5.56 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | GO:A0A078DMZ8 | EnsemblPlants:CDX90626 | ProteinID:CDX90626 | ProteinID:CDX90626.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00151270001 |
| InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 | ScanProsite:PS00434 |
| PANTHER:PTHR10015 | PANTHER:PTHR10015:SF260 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0004EDC7BC | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : | : |
Description
BnaA03g41550D
Coordinates
chrLK031863:-:1172223..1173544
Molecular Weight (calculated)
31393.4 Da
IEP (calculated)
5.478
GRAVY (calculated)
-0.597
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPFLHREND PPPSPPKPVE GLHEIGPPPF LIKTFEIVED PNTDHIVSWN RGGTSFVVWD LHSFSEFLLP RHFKHSNFSS FVRQLNTYGF RKIEAERWEF
101: ANEGFLLGQR HLLKSIKRRA SFASSSIIQD PCVELRKEKQ LLLMELASLR QQQQTARIYI KSMEQRIEGA EKKQRMMMSF LARAFQGPTF LYQLLQERDM
201: RLKEVEVEVE ERERGSSVSE LEALALEMQG YGRQRNVKEE EDMVVERELD DGFWEELLSN ESLASTSSS
101: ANEGFLLGQR HLLKSIKRRA SFASSSIIQD PCVELRKEKQ LLLMELASLR QQQQTARIYI KSMEQRIEGA EKKQRMMMSF LARAFQGPTF LYQLLQERDM
201: RLKEVEVEVE ERERGSSVSE LEALALEMQG YGRQRNVKEE EDMVVERELD DGFWEELLSN ESLASTSSS
001: MMNPFLPEGC DPPPPPQPME GLHENAPPPF LTKTFEMVDD PNTDHIVSWN RGGTSFVVWD LHSFSTILLP RHFKHSNFSS FIRQLNTYGF RKIEAERWEF
101: ANEEFLLGQR QLLKNIKRRN PFTPSSSPSH DACNELRREK QVLMMEIVSL RQQQQTTKSY IKAMEQRIEG TERKQRQMMS FLARAMQSPS FLHQLLKQRD
201: KKIKELEDNE SAKRKRGSSS MSELEVLALE MQGHGKQRNM LEEEDHQLVV ERELDDGFWE ELLSDESLAS TS
101: ANEEFLLGQR QLLKNIKRRN PFTPSSSPSH DACNELRREK QVLMMEIVSL RQQQQTTKSY IKAMEQRIEG TERKQRQMMS FLARAMQSPS FLHQLLKQRD
201: KKIKELEDNE SAKRKRGSSS MSELEVLALE MQGHGKQRNM LEEEDHQLVV ERELDDGFWE ELLSDESLAS TS
Arabidopsis Description
HSFA7AHeat stress transcription factor A-7a [Source:UniProtKB/Swiss-Prot;Acc:Q9SV12]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.