Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G438900.1 | Wheat | nucleus | 91.94 | 84.3 |
| TraesCS2A01G089300.1 | Wheat | nucleus | 74.56 | 71.67 |
| Os07t0178600-01 | Rice | nucleus | 60.45 | 64.52 |
| EER95940 | Sorghum | nucleus | 59.7 | 63.71 |
| Zm00001d018941_P001 | Maize | nucleus | 59.19 | 62.67 |
| TraesCS5A01G437900.1 | Wheat | nucleus | 51.39 | 58.96 |
| Solyc06g053960.2.1 | Tomato | nucleus | 19.14 | 53.52 |
| AT3G51910.1 | Thale cress | nucleus | 32.49 | 47.43 |
| Bra012829.1-P | Field mustard | nucleus | 29.22 | 46.77 |
| TraesCS1A01G375600.2 | Wheat | nucleus | 42.32 | 45.65 |
| CDX95313 | Canola | nucleus | 30.73 | 45.52 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 39.04 | 45.45 |
| CDX90626 | Canola | nucleus | 29.97 | 44.24 |
| Bra012828.1-P | Field mustard | nucleus | 29.97 | 44.24 |
| KRH31657 | Soybean | nucleus | 37.53 | 44.21 |
| KRG95588 | Soybean | nucleus | 40.81 | 43.78 |
| CDY29054 | Canola | nucleus | 29.22 | 43.77 |
| VIT_00s0179g00150.t01 | Wine grape | nucleus | 39.8 | 43.77 |
| KRG91367 | Soybean | nucleus | 40.05 | 43.44 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 40.3 | 43.01 |
| CDX90627 | Canola | nucleus | 30.98 | 42.86 |
| KRH32059 | Soybean | nucleus | 36.02 | 41.94 |
| Solyc09g082670.2.1 | Tomato | nucleus | 37.28 | 41.57 |
| KRH67266 | Soybean | nucleus | 40.3 | 41.45 |
| KRH35452 | Soybean | nucleus | 38.04 | 41.26 |
| VIT_05s0020g04090.t01 | Wine grape | nucleus | 36.52 | 41.19 |
| CDX94887 | Canola | nucleus | 27.96 | 41.11 |
| PGSC0003DMT400049793 | Potato | nucleus | 37.53 | 40.93 |
| Solyc09g065660.2.1 | Tomato | nucleus | 38.04 | 40.59 |
| CDY10674 | Canola | nucleus | 39.55 | 40.36 |
| PGSC0003DMT400016511 | Potato | nucleus | 36.78 | 40.33 |
| CDY14893 | Canola | nucleus | 26.45 | 40.08 |
| PGSC0003DMT400049795 | Potato | nucleus | 36.27 | 40.0 |
| AT5G43840.1 | Thale cress | nucleus | 28.21 | 39.72 |
| AT3G63350.1 | Thale cress | nucleus | 27.96 | 39.36 |
| CDY34229 | Canola | nucleus | 37.53 | 39.31 |
| Bra033913.1-P | Field mustard | nucleus | 39.8 | 38.82 |
| CDY10311 | Canola | nucleus | 37.78 | 38.66 |
| CDX94884 | Canola | nucleus | 27.71 | 38.33 |
| Bra007739.1-P | Field mustard | nucleus | 27.46 | 38.25 |
| CDY11470 | Canola | nucleus | 27.46 | 38.25 |
| CDY46607 | Canola | nucleus | 35.52 | 38.01 |
| AT3G22830.1 | Thale cress | nucleus | 38.79 | 37.93 |
| CDX76693 | Canola | nucleus | 27.2 | 37.89 |
| CDY46606 | Canola | nucleus | 36.52 | 37.86 |
| Bra001885.1-P | Field mustard | nucleus | 37.28 | 37.85 |
| Bra035993.1-P | Field mustard | nucleus | 26.7 | 37.72 |
| Bra023800.1-P | Field mustard | nucleus | 37.78 | 37.69 |
| PGSC0003DMT400041944 | Potato | nucleus | 31.99 | 36.92 |
| CDX92958 | Canola | nucleus | 30.73 | 35.47 |
| TraesCS7A01G355300.1 | Wheat | nucleus | 23.17 | 34.59 |
| TraesCS5A01G550700.1 | Wheat | nucleus | 23.68 | 34.43 |
| TraesCS5A01G548700.1 | Wheat | nucleus | 23.68 | 34.31 |
| TraesCS3A01G280800.1 | Wheat | nucleus | 19.9 | 33.47 |
| TraesCS5A01G524000.1 | Wheat | nucleus | 21.91 | 33.21 |
| TraesCS7A01G360400.1 | Wheat | nucleus | 28.97 | 32.12 |
| TraesCS4A01G062800.1 | Wheat | nucleus | 29.97 | 31.07 |
| TraesCS3A01G393100.1 | Wheat | nucleus | 21.91 | 30.85 |
| TraesCS3A01G393200.1 | Wheat | nucleus | 23.93 | 30.25 |
| TraesCS3A01G229000.1 | Wheat | nucleus | 23.93 | 29.23 |
| TraesCS4A01G322300.1 | Wheat | nucleus | 35.52 | 27.06 |
| TraesCS6A01G098800.1 | Wheat | nucleus | 28.21 | 24.45 |
| TraesCS1A01G350400.2 | Wheat | nucleus | 25.69 | 23.02 |
| TraesCS2A01G204500.1 | Wheat | nucleus | 28.46 | 22.65 |
| TraesCS3A01G289200.1 | Wheat | nucleus | 23.17 | 21.3 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 |
| PANTHER:PTHR10015 | PANTHER:PTHR10015:SF139 | SMART:SM00415 | SUPFAM:SSF46785 | EnsemblPlantsGene:TraesCS3A01G405200 | EnsemblPlants:TraesCS3A01G405200.1 |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3A:+:649819148..649822731
Molecular Weight (calculated)
44230.9 Da
IEP (calculated)
4.898
GRAVY (calculated)
-0.645
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPMPSLVKV EEEDGHGTGD SPGATAAPRP LEGLRDAKPS LFLTKTYDMV DDRSTDNVVS WSAGNNSLVV WDLHRFSAVL LPRHFKHSNF STFVRQLNTY
101: GFRKVDPDRW EFANEGFLRG QRHLLKNIRR RRPPANTAPN QQSLGSYLEV GHFGNHTDTD QLKRDKQLLM AEVVKLRQEQ QSMKTHLKGM EERLHGTERK
201: QQQMTAFLAR VFRNPELLKQ LVSLNGVRKE LHDAMSKKRR RSIDQGPEAD DMGASGSLEQ DSPVLSDPHE SVELLGEVSV ELLADGVPSE LESSVALLAD
301: GIPPDLEGAA ELLVDVIPSD INDSGVDTNG VKPQDFGLGT CEVQQNRAQG VLHDDFWEEL MSRALSDEDD NPVNVDGMDV MSEKTDHLVP NSPTRAT
101: GFRKVDPDRW EFANEGFLRG QRHLLKNIRR RRPPANTAPN QQSLGSYLEV GHFGNHTDTD QLKRDKQLLM AEVVKLRQEQ QSMKTHLKGM EERLHGTERK
201: QQQMTAFLAR VFRNPELLKQ LVSLNGVRKE LHDAMSKKRR RSIDQGPEAD DMGASGSLEQ DSPVLSDPHE SVELLGEVSV ELLADGVPSE LESSVALLAD
301: GIPPDLEGAA ELLVDVIPSD INDSGVDTNG VKPQDFGLGT CEVQQNRAQG VLHDDFWEEL MSRALSDEDD NPVNVDGMDV MSEKTDHLVP NSPTRAT
001: MDVSKVTTSD GGGDSMETKP SPQPQPAAIL SSNAPPPFLS KTYDMVDDHN TDSIVSWSAN NNSFIVWKPP EFARDLLPKN FKHNNFSSFV RQLNTYGFRK
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SRQNP
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SRQNP
Arabidopsis Description
HSFA1DHeat stress transcription factor A-1d [Source:UniProtKB/Swiss-Prot;Acc:Q9LQM7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.