Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G083800.1 | Wheat | nucleus | 95.63 | 95.63 |
| TraesCS6B01G127000.1 | Wheat | nucleus | 93.67 | 94.29 |
| HORVU6Hr1G017910.1 | Barley | nucleus | 93.01 | 93.22 |
| Os02t0496100-01 | Rice | nucleus | 76.42 | 73.68 |
| EES05094 | Sorghum | nucleus | 71.4 | 67.42 |
| Zm00001d016520_P001 | Maize | nucleus | 69.65 | 60.42 |
| GSMUA_Achr9P01640_001 | Banana | nucleus | 45.85 | 55.12 |
| GSMUA_Achr6P27750_001 | Banana | nucleus | 46.94 | 54.71 |
| GSMUA_Achr8P28330_001 | Banana | nucleus | 35.59 | 49.85 |
| PGSC0003DMT400011871 | Potato | nucleus | 46.72 | 44.77 |
| Solyc12g098520.1.1 | Tomato | nucleus | 46.51 | 44.56 |
| AT4G13980.1 | Thale cress | nucleus | 43.45 | 42.7 |
| KRH58845 | Soybean | nucleus | 44.54 | 42.59 |
| KRH42748 | Soybean | nucleus | 43.67 | 41.93 |
| CDY01180 | Canola | nucleus | 41.92 | 40.25 |
| CDY12723 | Canola | nucleus | 41.7 | 40.21 |
| Bra032752.1-P | Field mustard | nucleus | 41.7 | 40.04 |
| VIT_05s0029g00350.t01 | Wine grape | mitochondrion, nucleus | 36.46 | 37.95 |
| TraesCS5A01G437900.1 | Wheat | nucleus | 26.42 | 34.97 |
| TraesCS3A01G280800.1 | Wheat | nucleus | 17.69 | 34.32 |
| TraesCS1A01G375600.2 | Wheat | nucleus | 27.29 | 33.97 |
| TraesCS5A01G548700.1 | Wheat | nucleus | 20.09 | 33.58 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 24.89 | 33.43 |
| TraesCS5A01G550700.1 | Wheat | nucleus | 19.21 | 32.23 |
| TraesCS3A01G289200.1 | Wheat | nucleus | 29.91 | 31.71 |
| TraesCS1A01G350400.2 | Wheat | nucleus | 29.91 | 30.93 |
| TraesCS7A01G355300.1 | Wheat | nucleus | 17.69 | 30.45 |
| TraesCS5A01G524000.1 | Wheat | nucleus | 17.25 | 30.15 |
| TraesCS2A01G089300.1 | Wheat | nucleus | 27.07 | 30.02 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 24.02 | 29.57 |
| TraesCS3A01G405200.1 | Wheat | nucleus | 24.45 | 28.21 |
| TraesCS7A01G360400.1 | Wheat | nucleus | 21.83 | 27.93 |
| TraesCS3A01G393200.1 | Wheat | nucleus | 19.0 | 27.71 |
| TraesCS3A01G393100.1 | Wheat | nucleus | 16.81 | 27.3 |
| TraesCS4A01G322300.1 | Wheat | nucleus | 31.0 | 27.26 |
| TraesCS3A01G229000.1 | Wheat | nucleus | 19.21 | 27.08 |
| TraesCS4A01G062800.1 | Wheat | nucleus | 21.4 | 25.59 |
| TraesCS2A01G204500.1 | Wheat | nucleus | 23.58 | 21.64 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 |
| ScanProsite:PS00434 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF157 | SMART:SM00415 | SUPFAM:SSF46785 | EnsemblPlantsGene:TraesCS6A01G098800 |
| EnsemblPlants:TraesCS6A01G098800.1 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chr6A:-:65843540..65847011
Molecular Weight (calculated)
49873.9 Da
IEP (calculated)
5.053
GRAVY (calculated)
-0.619
Length
458 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSGAVGAR GGGGGGPAPF LLKTYEMVDD PATDAVVSWS DASDTSFVVW NSPEFAARLL PAYFKHSNFS SFIRQLNTYG FRKIDPERWE FGNEYFVKGQ
101: KHLLKNIYRR KPIHSHSHQP GALPDNERSF FEDEIDRLAR EKANLQAELW KSKQQESGTM FQIEALERRA VDMEQRQGKM IAFLQQASKN PHFVSKLVKM
201: AEASSMFADA LHKKRRLSGL DYAVEATETA SFCDDHSATS RQEMGNLLNQ HFSDKLKLGL CSAAAESNLV TLSTQSSHED NGSPHGRHPP VHDGMGTGCL
301: PLVPQIMELS DTGTSICPSK SSFFAPAVND EGLSPCHLSL TLASCSMDVD RGQASNADGS TTINEGSDNP PEATATAMGG NPKASVDAGT AEAPTPREDT
401: WVAAEPAAPV KANDNFWEQF LTERPGDASS GPRDPSMDKE QTEGGGKDDR EVTEQLKL
101: KHLLKNIYRR KPIHSHSHQP GALPDNERSF FEDEIDRLAR EKANLQAELW KSKQQESGTM FQIEALERRA VDMEQRQGKM IAFLQQASKN PHFVSKLVKM
201: AEASSMFADA LHKKRRLSGL DYAVEATETA SFCDDHSATS RQEMGNLLNQ HFSDKLKLGL CSAAAESNLV TLSTQSSHED NGSPHGRHPP VHDGMGTGCL
301: PLVPQIMELS DTGTSICPSK SSFFAPAVND EGLSPCHLSL TLASCSMDVD RGQASNADGS TTINEGSDNP PEATATAMGG NPKASVDAGT AEAPTPREDT
401: WVAAEPAAPV KANDNFWEQF LTERPGDASS GPRDPSMDKE QTEGGGKDDR EVTEQLKL
001: MNGALGNSSA SVSGGEGAGG PAPFLVKTYE MVDDSSTDQI VSWSANNNSF IVWNHAEFSR LLLPTYFKHN NFSSFIRQLN TYGFRKIDPE RWEFLNDDFI
101: KDQKHLLKNI HRRKPIHSHS HPPASSTDQE RAVLQEQMDK LSREKAAIEA KLLKFKQQKV VAKHQFEEMT EHVDDMENRQ KKLLNFLETA IRNPTFVKNF
201: GKKVEQLDIS AYNKKRRLPE VEQSKPPSED SHLDNSSGSS RRESGNIFHQ NFSNKLRLEL SPADSDMNMV SHSIQSSNEE GASPKGILSG GDPNTTLTKR
301: EGLPFAPEAL ELADTGTCPR RLLLNDNTRV ETLQQRLTSS EETDGSFSCH LNLTLASAPL PDKTASQIAK TTLKSQELNF NSIETSASEK NRGRQEIAVG
401: GSQANAAPPA RVNDVFWEQF LTERPGSSDN EEASSTYRGN PYEEQEEKRN GSMMLRNTKN IEQLTL
101: KDQKHLLKNI HRRKPIHSHS HPPASSTDQE RAVLQEQMDK LSREKAAIEA KLLKFKQQKV VAKHQFEEMT EHVDDMENRQ KKLLNFLETA IRNPTFVKNF
201: GKKVEQLDIS AYNKKRRLPE VEQSKPPSED SHLDNSSGSS RRESGNIFHQ NFSNKLRLEL SPADSDMNMV SHSIQSSNEE GASPKGILSG GDPNTTLTKR
301: EGLPFAPEAL ELADTGTCPR RLLLNDNTRV ETLQQRLTSS EETDGSFSCH LNLTLASAPL PDKTASQIAK TTLKSQELNF NSIETSASEK NRGRQEIAVG
401: GSQANAAPPA RVNDVFWEQF LTERPGSSDN EEASSTYRGN PYEEQEEKRN GSMMLRNTKN IEQLTL
Arabidopsis Description
HSFA5Heat stress transcription factor A-5 [Source:UniProtKB/Swiss-Prot;Acc:Q94BZ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.