Factsheet for Bra032752.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01180	Canola	nucleus	98.74	98.74
AT4G13980.1	Thale cress	nucleus	84.91	86.91
KRH58845	Soybean	nucleus	57.23	56.99
KRH42748	Soybean	nucleus	56.39	56.39
Solyc12g098520.1.1	Tomato	nucleus	51.15	51.05
PGSC0003DMT400011871	Potato	nucleus	50.94	50.84
GSMUA_Achr9P01640_001	Banana	nucleus	39.2	49.08
GSMUA_Achr6P27750_001	Banana	nucleus	38.99	47.33
VIT_05s0029g00350.t01	Wine grape	mitochondrion, nucleus	43.61	47.27
Os02t0496100-01	Rice	nucleus	44.65	44.84
GSMUA_Achr8P28330_001	Banana	nucleus	29.77	43.43
EES05094	Sorghum	nucleus	44.03	43.3
TraesCS6B01G127000.1	Wheat	nucleus	40.25	42.2
TraesCS6D01G083800.1	Wheat	nucleus	40.25	41.92
HORVU6Hr1G017910.1	Barley	nucleus	40.04	41.79
TraesCS6A01G098800.1	Wheat	nucleus	40.04	41.7
Zm00001d016520_P001	Maize	nucleus	43.82	39.58
Bra012829.1-P	Field mustard	nucleus	18.87	36.29
Bra017595.1-P	Field mustard	nucleus	25.37	35.59
Bra012828.1-P	Field mustard	nucleus	19.71	34.94
Bra020988.1-P	Field mustard	nucleus	24.95	34.1
Bra012571.1-P	Field mustard	nucleus	26.62	32.56
Bra007739.1-P	Field mustard	nucleus	18.87	31.58
Bra035993.1-P	Field mustard	nucleus	18.45	31.32
Bra000557.1-P	Field mustard	nucleus	20.96	28.74
Bra013253.1-P	Field mustard	nucleus	16.77	28.47
Bra015050.1-P	Field mustard	nucleus	18.24	28.16
Bra032023.1-P	Field mustard	nucleus	26.62	27.85
Bra021381.1-P	Field mustard	nucleus	25.58	26.87
Bra040179.1-P	Field mustard	nucleus	24.32	26.85
Bra023800.1-P	Field mustard	nucleus	22.22	26.63
Bra033913.1-P	Field mustard	nucleus	22.64	26.54
Bra001071.1-P	Field mustard	nucleus	24.74	26.05
Bra023584.1-P	Field mustard	nucleus	24.11	26.02
Bra001885.1-P	Field mustard	nucleus	21.17	25.83
Bra013358.1-P	Field mustard	nucleus	27.46	25.34
Bra008593.1-P	Field mustard	nucleus	24.74	24.43
Bra023258.1-P	Field mustard	nucleus	24.11	23.61
Bra009515.1-P	Field mustard	nucleus	17.4	22.86
Bra035507.1-P	Field mustard	nucleus	19.71	22.01

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	EnsemblPlantsGene:Bra032752	EnsemblPlants:Bra032752.1	EnsemblPlants:Bra032752.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam
InterPro:IPR036388	UniProt:M4EVB9	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015
PANTHER:PTHR10015:SF157	SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI0002543C23	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf
SEG:seg	:	:	:	:	:

Description

AT4G13980 (E=4e-223) AT-HSFA5, HSFA5 | AT-HSFA5; DNA binding / transcription factor

Coordinates

chrA04:+:4884274..4885787

Molecular Weight (calculated)

53004.5 Da

IEP (calculated)

6.315

GRAVY (calculated)

-0.800

Length

477 amino acids

Sequence
(BLAST)

001: MNGALGNSSA SVNGGGGGDG AGGPAPFLVK TYEMVDDSST DEIVSWSSNN NSFIVWNHAE FSRLLLPTYF KHNNFSSFIR QLNTYGFRKI DPERWEFSND
101: DFIKDQKHLL KNIHRRKPIH SHSQPPVSSV DQERAALQEH MDKLSREKAA IEAKLFKFKQ HKATAKHNFD EMAEHVEDME KRQEKLMSFL ETAMRNPTFI
201: KSFGRKVEEL DLDVSAYNKK RRLPQGEQSK PPSEDSHLDN SSGSSRPESG NIFHQNFSSK LRLVLSPAVS DLNMVSHSIQ SSNEGGASPK GILSGSDPKT
301: TQTRREGLPF APEALELADT GSCPGILLLN DKTIPEPLQQ MITSSEETDG SFSCHLNLTL ASAPLPDKTA SQIAKATHKS QEIGRVTELN FNSIETSSSE
401: KNRGQQEVAA GGKQANAAPP ARVNDVFWEQ FLTERPGSSD NEEASSTYRE NPCEEQEEKR NGHVMSRNTK NIEQLTL

Best Arabidopsis Sequence Match ( AT4G13980.1 )
(BLAST)

001: MNGALGNSSA SVSGGEGAGG PAPFLVKTYE MVDDSSTDQI VSWSANNNSF IVWNHAEFSR LLLPTYFKHN NFSSFIRQLN TYGFRKIDPE RWEFLNDDFI
101: KDQKHLLKNI HRRKPIHSHS HPPASSTDQE RAVLQEQMDK LSREKAAIEA KLLKFKQQKV VAKHQFEEMT EHVDDMENRQ KKLLNFLETA IRNPTFVKNF
201: GKKVEQLDIS AYNKKRRLPE VEQSKPPSED SHLDNSSGSS RRESGNIFHQ NFSNKLRLEL SPADSDMNMV SHSIQSSNEE GASPKGILSG GDPNTTLTKR
301: EGLPFAPEAL ELADTGTCPR RLLLNDNTRV ETLQQRLTSS EETDGSFSCH LNLTLASAPL PDKTASQIAK TTLKSQELNF NSIETSASEK NRGRQEIAVG
401: GSQANAAPPA RVNDVFWEQF LTERPGSSDN EEASSTYRGN PYEEQEEKRN GSMMLRNTKN IEQLTL

Arabidopsis Description

HSFA5Heat stress transcription factor A-5 [Source:UniProtKB/Swiss-Prot;Acc:Q94BZ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.