Factsheet for Zm00001d016520_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05094	Sorghum	nucleus	82.58	89.9
Os02t0496100-01	Rice	nucleus	64.2	71.37
TraesCS6B01G127000.1	Wheat	nucleus	60.98	70.77
TraesCS6D01G083800.1	Wheat	nucleus	60.42	69.65
TraesCS6A01G098800.1	Wheat	nucleus	60.42	69.65
HORVU6Hr1G017910.1	Barley	nucleus	59.28	68.49
GSMUA_Achr9P01640_001	Banana	nucleus	39.96	55.38
GSMUA_Achr6P27750_001	Banana	nucleus	40.53	54.45
GSMUA_Achr8P28330_001	Banana	nucleus	30.3	48.93
PGSC0003DMT400011871	Potato	nucleus	42.23	46.65
Solyc12g098520.1.1	Tomato	nucleus	42.05	46.44
AT4G13980.1	Thale cress	nucleus	40.53	45.92
CDY12723	Canola	nucleus	39.77	44.21
KRH58845	Soybean	nucleus	39.96	44.05
Bra032752.1-P	Field mustard	nucleus	39.58	43.82
KRH42748	Soybean	nucleus	39.58	43.82
CDY01180	Canola	nucleus	39.58	43.82
VIT_05s0029g00350.t01	Wine grape	mitochondrion, nucleus	33.33	40.0
Zm00001d012749_P001	Maize	nucleus	27.27	33.26
Zm00001d046299_P001	Maize	nucleus	16.67	32.96
Zm00001d018941_P001	Maize	nucleus	22.73	32.0
Zm00001d032923_P002	Maize	nucleus	21.4	31.65
Zm00001d010812_P001	Maize	nucleus	26.7	31.4
Zm00001d016255_P001	Maize	nucleus	15.15	31.13
Zm00001d043536_P001	Maize	nucleus	14.39	30.52
Zm00001d038746_P001	Maize	nucleus	26.89	30.28
Zm00001d033987_P001	Maize	nucleus	20.64	29.38
Zm00001d044168_P001	Maize	nucleus	18.18	29.0
Zm00001d027757_P001	Maize	nucleus	20.08	27.6
Zm00001d046204_P001	Maize	nucleus	18.18	26.3
Zm00001d034886_P001	Maize	nucleus	25.57	25.62
Zm00001d011406_P001	Maize	nucleus	17.8	24.29
Zm00001d012823_P001	Maize	nucleus	24.62	23.38
Zm00001d044259_P001	Maize	plastid	16.48	23.08
Zm00001d048041_P004	Maize	nucleus	19.13	22.35
Zm00001d016674_P001	Maize	nucleus	21.02	21.85
Zm00001d034433_P003	Maize	nucleus	22.92	19.48

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	UniProt:A0A1D6H8P4	ProteinID:AQK71090.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam	InterPro:IPR036388
PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434	PANTHER:PTHR10015	PANTHER:PTHR10015:SF157	SMART:SM00415
SUPFAM:SSF46785	UniParc:UPI000221A05E	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	EnsemblPlantsGene:Zm00001d016520	EnsemblPlants:Zm00001d016520_P001
EnsemblPlants:Zm00001d016520_T001	SEG:seg	:	:	:	:

Description

HSF-transcription factor 29Heat stress transcription factor A-5

Coordinates

chr5:+:165944432..165950570

Molecular Weight (calculated)

58141.8 Da

IEP (calculated)

5.782

GRAVY (calculated)

-0.714

Length

528 amino acids

Sequence
(BLAST)

001: MVTNPSPRGR GDSPLHLGVG IHQPSPTRSR QQAAAAARAA AAPVMEVAGA REPGSGGGGG GGGGGPAPFL LKTYEMVDDP SSDAVVSWSD ASDGSFVVWN
101: QPEFAARMLP TYFKHNNFSS FIRQLNTYGF RKIDPERWEF ANEYFVKGQK HLLKNIHRRK PIHSHSHQPG ALPDNERALF EDEIDRLSRE KAALQADLWK
201: FNQQQSGAVN QLEDLERRVL DMEQRQTKML SFLQQARKNP QFVRKLVKMA EESPIFADAF HKKRRLPGLE CITDATETAT SFFDDHSSSS RQEMGNLLNQ
301: HFSDKLKLGL CPAMAESNLI TLSTQSSHED NGSPLGKHPD YERTGMECLP LVPQMMELSD TGTSICPSKS VSFTTAANDD GFLPCHLNLS LASCPMDVVR
401: SQIPDANVNT VDEKDGPPEV TTPTMEKDDG MPDRCHDATQ NQKEASGHAG AAADATGRPH RGSQAPPEEH TGPQVVVNDK FWEQFLTERP GCPEAEEASF
501: TLRRDPDHTH AYDEGTGSDT RDMGQLKL

Best Arabidopsis Sequence Match ( AT4G13980.1 )
(BLAST)

001: MNGALGNSSA SVSGGEGAGG PAPFLVKTYE MVDDSSTDQI VSWSANNNSF IVWNHAEFSR LLLPTYFKHN NFSSFIRQLN TYGFRKIDPE RWEFLNDDFI
101: KDQKHLLKNI HRRKPIHSHS HPPASSTDQE RAVLQEQMDK LSREKAAIEA KLLKFKQQKV VAKHQFEEMT EHVDDMENRQ KKLLNFLETA IRNPTFVKNF
201: GKKVEQLDIS AYNKKRRLPE VEQSKPPSED SHLDNSSGSS RRESGNIFHQ NFSNKLRLEL SPADSDMNMV SHSIQSSNEE GASPKGILSG GDPNTTLTKR
301: EGLPFAPEAL ELADTGTCPR RLLLNDNTRV ETLQQRLTSS EETDGSFSCH LNLTLASAPL PDKTASQIAK TTLKSQELNF NSIETSASEK NRGRQEIAVG
401: GSQANAAPPA RVNDVFWEQF LTERPGSSDN EEASSTYRGN PYEEQEEKRN GSMMLRNTKN IEQLTL

Arabidopsis Description

HSFA5Heat stress transcription factor A-5 [Source:UniProtKB/Swiss-Prot;Acc:Q94BZ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.