Factsheet for Zm00001d018941_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95940	Sorghum	nucleus	90.93	91.67
Os07t0178600-01	Rice	nucleus	78.93	79.57
TraesCS2B01G105100.1	Wheat	nucleus	69.87	64.69
TraesCS2A01G089300.1	Wheat	nucleus	70.93	64.41
TraesCS2D01G087400.1	Wheat	nucleus	70.4	64.08
HORVU2Hr1G014590.1	Barley	nucleus	70.67	63.4
TraesCS3A01G405200.1	Wheat	nucleus	62.67	59.19
Solyc06g053960.2.1	Tomato	nucleus	22.4	59.15
TraesCS3B01G438900.1	Wheat	nucleus	61.33	53.12
KRH31657	Soybean	nucleus	45.33	50.45
Zm00001d032923_P002	Maize	nucleus	46.93	49.3
AT3G51910.1	Thale cress	nucleus	35.73	49.26
VIT_00s0179g00150.t01	Wine grape	nucleus	47.2	49.03
CDX95313	Canola	nucleus	34.93	48.88
KRG91367	Soybean	nucleus	47.47	48.63
Bra012829.1-P	Field mustard	nucleus	31.47	47.58
KRG95588	Soybean	nucleus	46.67	47.3
KRH32059	Soybean	nucleus	42.93	47.21
VIT_05s0020g04090.t01	Wine grape	nucleus	43.2	46.02
Solyc09g082670.2.1	Tomato	nucleus	43.47	45.79
Bra012828.1-P	Field mustard	nucleus	32.8	45.72
KRH67266	Soybean	nucleus	46.93	45.6
KRH35452	Soybean	nucleus	44.27	45.36
CDX90626	Canola	nucleus	32.53	45.35
Zm00001d033987_P001	Maize	nucleus	44.8	45.28
PGSC0003DMT400016511	Potato	nucleus	43.47	45.03
CDY29054	Canola	nucleus	31.73	44.91
PGSC0003DMT400049793	Potato	nucleus	43.2	44.51
CDX90627	Canola	nucleus	33.87	44.25
CDX94887	Canola	nucleus	31.73	44.07
CDY10674	Canola	nucleus	45.6	43.96
Solyc09g065660.2.1	Tomato	nucleus	43.47	43.82
CDY34229	Canola	nucleus	44.27	43.8
PGSC0003DMT400049795	Potato	nucleus	41.6	43.33
CDY10311	Canola	nucleus	44.27	42.78
CDY46606	Canola	nucleus	43.47	42.56
CDY14893	Canola	nucleus	29.6	42.37
Bra033913.1-P	Field mustard	nucleus	45.87	42.26
AT3G22830.1	Thale cress	nucleus	45.6	42.12
Bra023800.1-P	Field mustard	nucleus	44.53	41.96
Zm00001d027757_P001	Maize	nucleus	42.93	41.93
PGSC0003DMT400041944	Potato	nucleus	38.4	41.86
CDY46607	Canola	nucleus	41.33	41.78
AT5G43840.1	Thale cress	nucleus	31.2	41.49
Bra001885.1-P	Field mustard	nucleus	42.67	40.92
CDX94884	Canola	nucleus	31.2	40.77
Bra035993.1-P	Field mustard	nucleus	30.13	40.21
Zm00001d016255_P001	Maize	nucleus	27.2	39.69
AT3G63350.1	Thale cress	nucleus	29.33	39.01
Bra007739.1-P	Field mustard	nucleus	29.33	38.6
CDY11470	Canola	nucleus	29.33	38.6
CDX92958	Canola	nucleus	35.2	38.37
CDX76693	Canola	nucleus	29.07	38.25
Zm00001d046299_P001	Maize	nucleus	26.93	37.83
Zm00001d034433_P003	Maize	nucleus	62.13	37.52
Zm00001d043536_P001	Maize	nucleus	22.13	33.33
Zm00001d046204_P001	Maize	nucleus	32.27	33.15
Zm00001d044168_P001	Maize	nucleus	28.0	31.72
Zm00001d034886_P001	Maize	nucleus	41.33	29.41
Zm00001d048041_P004	Maize	nucleus	33.87	28.1
Zm00001d011406_P001	Maize	nucleus	28.53	27.65
Zm00001d044259_P001	Maize	plastid	27.2	27.06
Zm00001d012823_P001	Maize	nucleus	39.2	26.44
Zm00001d012749_P001	Maize	nucleus	28.53	24.71
Zm00001d016674_P001	Maize	nucleus	32.27	23.82
Zm00001d010812_P001	Maize	nucleus	28.0	23.39
Zm00001d016520_P001	Maize	nucleus	32.0	22.73
Zm00001d038746_P001	Maize	nucleus	26.93	21.54

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:100280318	MapMan:15.5.13	UniProt:B6SVD5	EMBL:BT056006	ncoils:Coil
EMBL:EU956700	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HSF_DNA-bd
InterPro:HSF_fam	InterPro:IPR036388	ProteinID:ONM51696.1	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434
PANTHER:PTHR10015	PANTHER:PTHR10015:SF139	SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI000182B6CC	InterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sf	EnsemblPlantsGene:Zm00001d018941	EnsemblPlants:Zm00001d018941_P001	EnsemblPlants:Zm00001d018941_T001	SEG:seg	:

Description

HSF-transcription factor 4Heat stress transcription factor A-6b

Coordinates

chr7:-:9991664..9995513

Molecular Weight (calculated)

42046.1 Da

IEP (calculated)

4.464

GRAVY (calculated)

-0.716

Length

375 amino acids

Sequence
(BLAST)

001: MDSTLNQVKE ESHGEGGDLM AGTVEAADGP SAAVAAAPKP MEGLHDPGPP PFLTKTYDMV DDSDTDLIVS WSATNNSFVV WDPHAFATVL LPRHFKHNNF
101: SSFVRQLNTY GFRKVDPDRW EFANEGFLRG QRHLLKNIRR RKPPAQNATN QQSIGPYLEV GHFGYDAEID MLKRDKQLLM AEVVKLRQEQ QNTKANLKAM
201: EDRLQGTEQK QQQMMAFLAR VMRNPEFLKH LVSQNEMRKE LQDAISKKRR RRIDQGPEAD DLGASSSLEQ GSPVLFNAQD PVEFLVDGIP ADLESPAFDG
301: HGLIGPHDID IDIDIGSTSE QQQDMPQEDL NDNFWEQLLN EGLGEENDSP VIEDDMNVLS EKMGYLNSDG PTSSN

Best Arabidopsis Sequence Match ( AT3G22830.1 )
(BLAST)

001: MDPSFRFIKE EFPAGFSDSP SPPSSSSYLY SSSMAEAAIN DPTTLSYPQP LEGLHESGPP PFLTKTYDLV EDSRTNHVVS WSKSNNSFIV WDPQAFSVTL
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN

Arabidopsis Description

HSFA6BHeat stress transcription factor A-6b [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.