Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g053960.2.1 | Tomato | nucleus | 25.52 | 60.56 |
| KRG91367 | Soybean | nucleus | 64.09 | 59.02 |
| KRH35452 | Soybean | nucleus | 62.02 | 57.1 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 45.7 | 53.1 |
| VIT_05s0020g04090.t01 | Wine grape | nucleus | 52.82 | 50.57 |
| CDX94887 | Canola | nucleus | 39.76 | 49.63 |
| KRG95588 | Soybean | nucleus | 54.01 | 49.19 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 48.66 | 49.1 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 44.21 | 48.38 |
| Solyc09g082670.2.1 | Tomato | nucleus | 51.04 | 48.31 |
| CDY34229 | Canola | nucleus | 54.3 | 48.28 |
| PGSC0003DMT400016511 | Potato | nucleus | 51.63 | 48.07 |
| KRH32059 | Soybean | nucleus | 48.37 | 47.8 |
| AT3G22830.1 | Thale cress | nucleus | 57.27 | 47.54 |
| CDY10674 | Canola | nucleus | 54.6 | 47.3 |
| CDY46606 | Canola | nucleus | 53.71 | 47.26 |
| KRH67266 | Soybean | nucleus | 53.71 | 46.89 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 46.29 | 46.85 |
| CDY46607 | Canola | nucleus | 51.34 | 46.63 |
| CDY10311 | Canola | nucleus | 53.12 | 46.13 |
| Bra023800.1-P | Field mustard | nucleus | 54.3 | 45.98 |
| Bra033913.1-P | Field mustard | nucleus | 55.19 | 45.7 |
| Bra001885.1-P | Field mustard | nucleus | 52.82 | 45.52 |
| TraesCS5A01G437900.1 | Wheat | nucleus | 46.59 | 45.38 |
| Zm00001d018941_P001 | Maize | nucleus | 50.45 | 45.33 |
| Os10t0419300-00 | Rice | nucleus | 48.07 | 45.25 |
| EER93298 | Sorghum | nucleus | 45.4 | 45.13 |
| PGSC0003DMT400041944 | Potato | nucleus | 45.99 | 45.06 |
| CDX94884 | Canola | nucleus | 38.28 | 44.95 |
| EER95940 | Sorghum | nucleus | 49.55 | 44.89 |
| Os07t0178600-01 | Rice | nucleus | 49.55 | 44.89 |
| TraesCS4D01G276500.1 | Wheat | nucleus | 44.81 | 44.28 |
| TraesCS5D01G445100.1 | Wheat | nucleus | 45.7 | 44.25 |
| TraesCS5B01G440700.1 | Wheat | nucleus | 45.99 | 43.91 |
| CDX92958 | Canola | nucleus | 44.81 | 43.9 |
| CDY14893 | Canola | nucleus | 34.12 | 43.89 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 44.21 | 43.31 |
| HORVU1Hr1G083420.2 | Barley | nucleus | 47.77 | 43.28 |
| TraesCS4B01G278100.1 | Wheat | nucleus | 43.62 | 43.11 |
| EER94213 | Sorghum | nucleus | 46.29 | 43.09 |
| TraesCS1A01G375600.2 | Wheat | nucleus | 46.88 | 42.93 |
| TraesCS1B01G396000.1 | Wheat | nucleus | 45.4 | 42.74 |
| AT5G43840.1 | Thale cress | nucleus | 35.61 | 42.55 |
| Bra035993.1-P | Field mustard | nucleus | 35.31 | 42.35 |
| Zm00001d032923_P002 | Maize | nucleus | 44.81 | 42.3 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 42.73 | 42.23 |
| TraesCS1D01G382900.1 | Wheat | nucleus | 45.4 | 42.03 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 45.1 | 40.97 |
| KRH61515 | Soybean | nucleus | 45.1 | 40.86 |
| KRH05436 | Soybean | nucleus | 43.03 | 40.85 |
| Os03t0161900-02 | Rice | nucleus | 45.7 | 40.63 |
| TraesCS5D01G393200.1 | Wheat | nucleus | 45.4 | 40.58 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 44.21 | 40.05 |
| TraesCS2B01G105100.1 | Wheat | nucleus | 48.07 | 40.0 |
| EER95463 | Sorghum | nucleus | 45.99 | 39.64 |
| TraesCS2D01G087400.1 | Wheat | nucleus | 48.37 | 39.56 |
| KRH15573 | Soybean | nucleus | 42.73 | 39.56 |
| HORVU2Hr1G014590.1 | Barley | nucleus | 48.96 | 39.47 |
| TraesCS2A01G089300.1 | Wheat | nucleus | 48.37 | 39.47 |
| Zm00001d033987_P001 | Maize | nucleus | 43.32 | 39.35 |
| Zm00001d027757_P001 | Maize | nucleus | 44.81 | 39.32 |
| EER90889 | Sorghum | nucleus | 43.03 | 39.08 |
| TraesCS3A01G405200.1 | Wheat | nucleus | 44.21 | 37.53 |
| TraesCS3B01G438900.1 | Wheat | nucleus | 43.32 | 33.72 |
| KRH39283 | Soybean | nucleus | 29.67 | 31.25 |
| HORVU5Hr1G105770.2 | Barley | nucleus | 46.88 | 30.33 |
| KRH02689 | Soybean | nucleus | 34.42 | 28.71 |
| KRH77766 | Soybean | nucleus | 39.47 | 28.66 |
| KRH07474 | Soybean | nucleus | 43.32 | 28.63 |
| KRH74387 | Soybean | nucleus | 41.54 | 28.57 |
| KRH27709 | Soybean | nucleus | 38.87 | 28.23 |
| KRH39566 | Soybean | nucleus | 41.84 | 28.2 |
| KRH19208 | Soybean | nucleus | 34.12 | 28.19 |
| KRH20029 | Soybean | nucleus | 34.72 | 25.77 |
| KRH11063 | Soybean | nucleus | 29.67 | 25.51 |
| KRH21206 | Soybean | nucleus | 29.67 | 25.51 |
| KRH59030 | Soybean | nucleus | 30.27 | 25.37 |
| KRH42919 | Soybean | nucleus | 29.97 | 25.12 |
| Zm00001d034433_P003 | Maize | nucleus | 45.4 | 24.64 |
| KRH32651 | Soybean | nucleus | 33.53 | 24.57 |
| KRH67848 | Soybean | nucleus | 30.27 | 24.11 |
| KRH42748 | Soybean | nucleus | 32.34 | 22.85 |
| KRH58845 | Soybean | nucleus | 32.34 | 22.76 |
Protein Annotations
| Gene3D:1.10.10.10 | EntrezGene:100806789 | MapMan:15.5.13 | EMBL:ACUP02006074 | ncoils:Coil | EnsemblPlantsGene:GLYMA_10G003100 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HSF_DNA-bd | InterPro:HSF_fam |
| UniProt:I1L7E2 | InterPro:IPR036388 | EnsemblPlants:KRH31657 | ProteinID:KRH31657 | ProteinID:KRH31657.1 | PFAM:PF00447 |
| PRINTS:PR00056 | PANTHER:PTHR10015 | PANTHER:PTHR10015:SF139 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI000233C213 |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:315508..317837
Molecular Weight (calculated)
39125.0 Da
IEP (calculated)
4.353
GRAVY (calculated)
-0.690
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPNNDGPMI LVKEEFPEGV AIAPQPLEGL HEIGPPPFLT KTYDIVDDVS TDEIVSWSRG NNSFVVWDPQ AFSVTLLPRY FEHNNFSSFV RQLNTYGFRK
101: VDPDKWEFAN EGFLRGQKHL LKNIRRKKTL TNQQQALPID HCVEVGRFGS LDGEVDALRR DKQVLMVELV KLRQQQQNTR NNLQSMENRL KRTQKQQQQM
201: MKFLTRAMQN PNFLQQLVQQ REWRKDLEEA ATFSNKRIRS DVEECSSFVK LEHEEEHNND ITSSELEVSD MDLVIMNTEE EEEKLLGAEI ESINEEVLWE
301: ELLNEGTEED VLIGLEEDDE DIVVLAEELG YLASTPK
101: VDPDKWEFAN EGFLRGQKHL LKNIRRKKTL TNQQQALPID HCVEVGRFGS LDGEVDALRR DKQVLMVELV KLRQQQQNTR NNLQSMENRL KRTQKQQQQM
201: MKFLTRAMQN PNFLQQLVQQ REWRKDLEEA ATFSNKRIRS DVEECSSFVK LEHEEEHNND ITSSELEVSD MDLVIMNTEE EEEKLLGAEI ESINEEVLWE
301: ELLNEGTEED VLIGLEEDDE DIVVLAEELG YLASTPK
001: MDVSKVTTSD GGGDSMETKP SPQPQPAAIL SSNAPPPFLS KTYDMVDDHN TDSIVSWSAN NNSFIVWKPP EFARDLLPKN FKHNNFSSFV RQLNTYGFRK
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SRQNP
101: VDPDRWEFAN EGFLRGQKHL LQSITRRKPA HGQGQGHQRS QHSNGQNSSV SACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL
201: QGMENRQQQL MSFLAKAVQS PHFLSQFLQQ QNQQNESNRR ISDTSKKRRF KRDGIVRNND SATPDGQIVK YQPPMHEQAK AMFKQLMKME PYKTGDDGFL
301: LGNGTSTTEG TEMETSSNQV SGITLKEMPT ASEIQSSSPI ETTPENVSAA SEATENCIPS PDDLTLPDFT HMLPENNSEK PPESFMEPNL GGSSPLLDPD
401: LLIDDSLSFD IDDFPMDSDI DPVDYGLLER LLMSSPVPDN MDSTPVDNET EQEQNGWDKT KHMDNLTQQM GLLSPETLDL SRQNP
Arabidopsis Description
HSFA1DHeat stress transcription factor A-1d [Source:UniProtKB/Swiss-Prot;Acc:Q9LQM7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.