Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G278100.1 | Wheat | nucleus | 65.7 | 73.02 |
| TraesCS4D01G276500.1 | Wheat | nucleus | 65.17 | 72.43 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 64.64 | 71.85 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 64.64 | 71.22 |
| Os10t0419300-00 | Rice | nucleus | 62.53 | 66.2 |
| EER95463 | Sorghum | nucleus | 65.17 | 63.17 |
| Zm00001d027757_P001 | Maize | nucleus | 62.27 | 61.46 |
| Solyc06g053960.2.1 | Tomato | nucleus | 21.11 | 56.34 |
| CDX95313 | Canola | nucleus | 37.99 | 53.73 |
| Bra012829.1-P | Field mustard | nucleus | 35.09 | 53.63 |
| AT3G51910.1 | Thale cress | nucleus | 37.99 | 52.94 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 41.69 | 51.3 |
| CDX90626 | Canola | nucleus | 35.88 | 50.56 |
| Bra012828.1-P | Field mustard | nucleus | 35.88 | 50.56 |
| CDY29054 | Canola | nucleus | 35.09 | 50.19 |
| KRH32059 | Soybean | nucleus | 44.59 | 49.56 |
| VIT_00s0179g00150.t01 | Wine grape | nucleus | 46.97 | 49.31 |
| CDX90627 | Canola | nucleus | 37.2 | 49.13 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 43.01 | 48.95 |
| Os07t0178600-01 | Rice | nucleus | 47.23 | 48.12 |
| KRG95588 | Soybean | nucleus | 45.91 | 47.03 |
| KRH67266 | Soybean | nucleus | 47.23 | 46.37 |
| PGSC0003DMT400049793 | Potato | nucleus | 44.33 | 46.15 |
| KRH31657 | Soybean | nucleus | 40.63 | 45.7 |
| KRG91367 | Soybean | nucleus | 44.06 | 45.63 |
| PGSC0003DMT400049795 | Potato | nucleus | 43.01 | 45.28 |
| CDY11470 | Canola | nucleus | 34.04 | 45.26 |
| Bra007739.1-P | Field mustard | nucleus | 34.04 | 45.26 |
| CDX94887 | Canola | nucleus | 32.19 | 45.19 |
| CDX76693 | Canola | nucleus | 33.77 | 44.91 |
| Solyc09g065660.2.1 | Tomato | nucleus | 43.54 | 44.35 |
| CDY34229 | Canola | nucleus | 44.06 | 44.06 |
| KRH35452 | Soybean | nucleus | 42.22 | 43.72 |
| CDY46606 | Canola | nucleus | 43.8 | 43.34 |
| AT3G63350.1 | Thale cress | nucleus | 32.19 | 43.26 |
| CDY10674 | Canola | nucleus | 44.33 | 43.19 |
| CDY46607 | Canola | nucleus | 41.95 | 42.86 |
| CDY10311 | Canola | nucleus | 43.8 | 42.78 |
| Bra023800.1-P | Field mustard | nucleus | 44.59 | 42.46 |
| Bra033913.1-P | Field mustard | nucleus | 44.85 | 41.77 |
| VIT_05s0020g04090.t01 | Wine grape | nucleus | 38.79 | 41.76 |
| PGSC0003DMT400016511 | Potato | nucleus | 39.84 | 41.71 |
| AT3G22830.1 | Thale cress | nucleus | 44.59 | 41.63 |
| Solyc09g082670.2.1 | Tomato | nucleus | 39.05 | 41.57 |
| CDX94884 | Canola | nucleus | 31.4 | 41.46 |
| Bra001885.1-P | Field mustard | nucleus | 41.95 | 40.66 |
| CDY14893 | Canola | nucleus | 27.97 | 40.46 |
| PGSC0003DMT400041944 | Potato | nucleus | 36.41 | 40.12 |
| AT5G43840.1 | Thale cress | nucleus | 29.82 | 40.07 |
| Bra035993.1-P | Field mustard | nucleus | 29.02 | 39.15 |
| CDX92958 | Canola | nucleus | 35.36 | 38.95 |
| Os06t0565200-00 | Rice | nucleus | 31.4 | 35.95 |
| Os01t0733200-01 | Rice | nucleus | 23.48 | 35.6 |
| Os02t0232000-01 | Rice | nucleus | 25.86 | 32.89 |
| Os01t0571300-01 | Rice | mitochondrion, nucleus | 33.51 | 31.59 |
| Os03t0224700-01 | Rice | nucleus | 31.93 | 29.51 |
| Os01t0625300-01 | Rice | nucleus | 25.33 | 28.32 |
| Os03t0854500-01 | Rice | nucleus | 36.41 | 27.27 |
| Os02t0527300-01 | Rice | nucleus | 35.09 | 26.71 |
| Os05t0530400-01 | Rice | nucleus | 32.19 | 26.58 |
| Os02t0496100-01 | Rice | nucleus | 30.08 | 24.0 |
| Os01t0749300-02 | Rice | nucleus | 27.7 | 23.86 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | ProteinID:AAN06862.1 | EMBL:AY344489 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:HSF_DNA-bd |
| InterPro:HSF_fam | InterPro:IPR036388 | EnsemblPlantsGene:Os03g0161900 | EnsemblPlants:Os03t0161900-02 | PFAM:PF00447 | PRINTS:PR00056 |
| PANTHER:PTHR10015 | PANTHER:PTHR10015:SF201 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI00000AD26B | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : | : |
Description
HEAT STRESS TRANSCRIPTION FACTOR A2DSimilar to Isoform 2 of Heat stress transcription factor A-2d. (Os03t0161900-01);Heat stress transcriptioon factor, High-temperature stress tolerance (Os03t0161900-02)
Coordinates
chr3:+:3342254..3344542
Molecular Weight (calculated)
43709.1 Da
IEP (calculated)
8.902
GRAVY (calculated)
-0.725
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKMMPGMVK EEWPPSSPEE GEAPRPMEGL HEVGPPPFLT KTFDLVADPA TDGVVSWGRA GSSFVVWDPH VFAAVFLPRF FKHNNFSSFV RQLNTYFLVR
101: TNYLNKRSHF YSLRFQGFRK IDPDRWEFAN DGFLRGQRHL LKMIKRRRPL SYLPGSQQAL GTCLEVGQFG LDEEIDRLKR DKNILLAEVV KLRHKQQSTK
201: ANMRAMEERL QHAEQKQVQM MGFLARAMQN PDFFHQLIHQ QDKMKGLEDT FSKKRTRSID IVPFLNPGEV SQGDQLESTL LFDPRPFAEL NDEPAKSELE
301: NLALNIQGLG KGKQDVNRTR NQPRNQASNE TELTDDFWEE LLNEGARDDA GIPGMERRRP RYVDALAQKL GYLSNSSQK
101: TNYLNKRSHF YSLRFQGFRK IDPDRWEFAN DGFLRGQRHL LKMIKRRRPL SYLPGSQQAL GTCLEVGQFG LDEEIDRLKR DKNILLAEVV KLRHKQQSTK
201: ANMRAMEERL QHAEQKQVQM MGFLARAMQN PDFFHQLIHQ QDKMKGLEDT FSKKRTRSID IVPFLNPGEV SQGDQLESTL LFDPRPFAEL NDEPAKSELE
301: NLALNIQGLG KGKQDVNRTR NQPRNQASNE TELTDDFWEE LLNEGARDDA GIPGMERRRP RYVDALAQKL GYLSNSSQK
001: MDPSFRFIKE EFPAGFSDSP SPPSSSSYLY SSSMAEAAIN DPTTLSYPQP LEGLHESGPP PFLTKTYDLV EDSRTNHVVS WSKSNNSFIV WDPQAFSVTL
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN
Arabidopsis Description
HSFA6BHeat stress transcription factor A-6b [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.