Factsheet for Os07t0178600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95940	Sorghum	nucleus	80.65	80.65
Zm00001d018941_P001	Maize	nucleus	79.57	78.93
TraesCS2B01G105100.1	Wheat	nucleus	71.77	65.93
TraesCS2A01G089300.1	Wheat	nucleus	72.58	65.38
HORVU2Hr1G014590.1	Barley	nucleus	73.39	65.31
TraesCS2D01G087400.1	Wheat	nucleus	71.77	64.81
TraesCS3A01G405200.1	Wheat	nucleus	64.52	60.45
Solyc06g053960.2.1	Tomato	nucleus	21.51	56.34
TraesCS3B01G438900.1	Wheat	nucleus	64.25	55.2
Os10t0419300-00	Rice	nucleus	51.08	53.07
VIT_00s0179g00150.t01	Wine grape	nucleus	49.19	50.69
AT3G51910.1	Thale cress	nucleus	36.56	50.0
KRH31657	Soybean	nucleus	44.89	49.55
CDX95313	Canola	nucleus	34.68	48.13
KRG95588	Soybean	nucleus	47.58	47.84
KRG91367	Soybean	nucleus	46.51	47.27
Os03t0161900-02	Rice	nucleus	48.12	47.23
Bra012829.1-P	Field mustard	nucleus	31.45	47.18
KRH67266	Soybean	nucleus	48.12	46.37
KRH32059	Soybean	nucleus	42.2	46.04
PGSC0003DMT400049793	Potato	nucleus	44.89	45.88
Solyc09g082670.2.1	Tomato	nucleus	43.28	45.22
Solyc09g065660.2.1	Tomato	nucleus	45.16	45.16
KRH35452	Soybean	nucleus	44.35	45.08
CDX90626	Canola	nucleus	32.53	44.98
Bra012828.1-P	Field mustard	nucleus	32.53	44.98
PGSC0003DMT400049795	Potato	nucleus	43.28	44.72
CDY29054	Canola	nucleus	31.72	44.53
PGSC0003DMT400016511	Potato	nucleus	43.28	44.48
VIT_05s0020g04090.t01	Wine grape	nucleus	41.94	44.32
CDX90627	Canola	nucleus	33.6	43.55
CDY10674	Canola	nucleus	45.43	43.44
CDX94887	Canola	nucleus	31.45	43.33
CDY34229	Canola	nucleus	43.55	42.74
CDY10311	Canola	nucleus	43.82	42.01
Bra033913.1-P	Field mustard	nucleus	45.7	41.77
PGSC0003DMT400041944	Potato	nucleus	38.44	41.57
CDY46606	Canola	nucleus	42.74	41.51
CDY46607	Canola	nucleus	40.86	40.97
Bra023800.1-P	Field mustard	nucleus	43.82	40.95
CDY14893	Canola	nucleus	28.76	40.84
AT3G22830.1	Thale cress	nucleus	44.09	40.39
AT5G43840.1	Thale cress	nucleus	30.38	40.07
AT3G63350.1	Thale cress	nucleus	30.11	39.72
CDX94884	Canola	nucleus	30.38	39.37
Bra035993.1-P	Field mustard	nucleus	29.57	39.15
Bra007739.1-P	Field mustard	nucleus	29.84	38.95
CDY11470	Canola	nucleus	29.84	38.95
Bra001885.1-P	Field mustard	nucleus	40.86	38.87
CDX76693	Canola	nucleus	29.57	38.6
Os06t0565200-00	Rice	nucleus	33.6	37.76
Os01t0733200-01	Rice	nucleus	24.46	36.4
CDX92958	Canola	nucleus	33.6	36.34
Os02t0232000-01	Rice	nucleus	27.96	34.9
Os01t0571300-01	Rice	mitochondrion, nucleus	34.14	31.59
Os01t0625300-01	Rice	nucleus	28.76	31.56
Os03t0854500-01	Rice	nucleus	42.74	31.42
Os03t0224700-01	Rice	nucleus	34.41	31.22
Os02t0496100-01	Rice	nucleus	33.6	26.32
Os02t0527300-01	Rice	nucleus	35.22	26.31
Os05t0530400-01	Rice	nucleus	31.18	25.27
Os01t0749300-02	Rice	nucleus	29.3	24.77

Protein Annotations

Gene3D:1.10.10.10	MapMan:15.5.13	EntrezGene:4342550	EMBL:AY323488	EMBL:AY344487	ProteinID:BAD30327.1
ProteinID:BAF20942.1	ProteinID:BAT00300.1	ncoils:Coil	ProteinID:EAZ38891.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:HSF_DNA-bd	InterPro:HSF_fam
InterPro:IPR036388	EnsemblPlantsGene:Os07g0178600	EnsemblPlants:Os07t0178600-01	PFAM:PF00447	PRINTS:PR00056	ScanProsite:PS00434
PANTHER:PTHR10015	PANTHER:PTHR10015:SF139	UniProt:Q6VBB2	SMART:SM00415	SUPFAM:SSF46785	UniParc:UPI000000448C
InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	RefSeq:XP_015645272.1	SEG:seg	:	:

Description

HEAT STRESS TRANSCRIPTION FACTOR A2BSimilar to Heat shock transcription factor 29 (Fragment). (Os07t0178600-01)

Coordinates

chr7:+:4139160..4142436

Molecular Weight (calculated)

41526.5 Da

IEP (calculated)

4.388

GRAVY (calculated)

-0.697

Length

372 amino acids

Sequence
(BLAST)

001: MDDPMLNAVK EEESHGDGGG LEVVAGEDGA AAVAAGVAPR PMEGLHDAGP PPFLTKTYDM VDDAGTDAAV SWSATSNSFV VWDPHAFATV LLPRFFKHNN
101: FSSFVRQLNT YGFRKVDPDR WEFANENFLR GQRHLLKNIK RRKPPSHTAS NQQSLGPYLE VGHFGYDAEI DRLKRDKQLL MAEVVKLRQE QQNTKANLKA
201: MEDRLQGTEQ RQQQMMAFLA RVMKNPEFLK QLMSQNEMRK ELQDAISKKR RRRIDQGPEV DDVGTSSSIE QESPALFDPQ ESVEFLIDGI PSDLENSAMD
301: AGGLVEPQDF DVGASEQQQI GPQGELNDNF WEELLNEGLV GEENDNPVVE DDMNVLSEKM GYLNSNGPTA GE

Best Arabidopsis Sequence Match ( AT3G22830.1 )
(BLAST)

001: MDPSFRFIKE EFPAGFSDSP SPPSSSSYLY SSSMAEAAIN DPTTLSYPQP LEGLHESGPP PFLTKTYDLV EDSRTNHVVS WSKSNNSFIV WDPQAFSVTL
101: LPRFFKHNNF SSFVRQLNTY GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RKTSNNSNQM QQPQSSEQQS LDNFCIEVGR YGLDGEMDSL RRDKQVLMME
201: LVRLRQQQQS TKMYLTLIEE KLKKTESKQK QMMSFLARAM QNPDFIQQLV EQKEKRKEIE EAISKKRQRP IDQGKRNVED YGDESGYGND VAASSSALIG
301: MSQEYTYGNM SEFEMSELDK LAMHIQGLGD NSSAREEVLN VEKGNDEEEV EDQQQGYHKE NNEIYGEGFW EDLLNEGQNF DFEGDQENVD VLIQQLGYLG
401: SSSHTN

Arabidopsis Description

HSFA6BHeat stress transcription factor A-6b [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.