Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012829.1-P | Field mustard | nucleus | 83.97 | 97.18 |
| CDX90626 | Canola | nucleus | 81.18 | 86.62 |
| CDY29054 | Canola | nucleus | 79.09 | 85.66 |
| CDX95313 | Canola | nucleus | 79.09 | 84.7 |
| AT3G51910.1 | Thale cress | nucleus | 73.52 | 77.57 |
| CDY11470 | Canola | nucleus | 55.05 | 55.44 |
| CDX76693 | Canola | nucleus | 54.7 | 55.09 |
| KRG95588 | Soybean | nucleus | 54.36 | 42.16 |
| PGSC0003DMT400049795 | Potato | nucleus | 52.61 | 41.94 |
| Solyc09g065660.2.1 | Tomato | nucleus | 54.36 | 41.94 |
| VIT_00s0179g00150.t01 | Wine grape | nucleus | 52.61 | 41.83 |
| PGSC0003DMT400049793 | Potato | nucleus | 52.96 | 41.76 |
| KRH32059 | Soybean | nucleus | 49.48 | 41.64 |
| GSMUA_Achr8P20520_001 | Banana | nucleus | 41.81 | 41.38 |
| TraesCS4B01G278100.1 | Wheat | nucleus | 47.74 | 40.18 |
| KRH67266 | Soybean | nucleus | 54.01 | 40.16 |
| HORVU4Hr1G073650.2 | Barley | nucleus | 48.08 | 40.12 |
| TraesCS4D01G276500.1 | Wheat | nucleus | 47.39 | 39.88 |
| TraesCS4A01G027700.1 | Wheat | nucleus | 47.04 | 39.59 |
| GSMUA_Achr6P24430_001 | Banana | nucleus | 41.81 | 38.96 |
| Zm00001d032923_P002 | Maize | nucleus | 47.74 | 38.38 |
| GSMUA_Achr5P03000_001 | Banana | nucleus | 44.6 | 38.32 |
| Os10t0419300-00 | Rice | nucleus | 47.74 | 38.27 |
| EER94213 | Sorghum | nucleus | 48.08 | 38.12 |
| Os03t0161900-02 | Rice | nucleus | 49.13 | 37.2 |
| CDY14893 | Canola | nucleus | 33.8 | 37.02 |
| TraesCS1B01G396000.1 | Wheat | nucleus | 45.99 | 36.87 |
| CDX94887 | Canola | nucleus | 34.49 | 36.67 |
| HORVU1Hr1G083420.2 | Barley | nucleus | 47.04 | 36.29 |
| TraesCS1D01G382900.1 | Wheat | nucleus | 45.99 | 36.26 |
| EER95463 | Sorghum | nucleus | 49.13 | 36.06 |
| EER93298 | Sorghum | nucleus | 42.16 | 35.69 |
| Zm00001d027757_P001 | Maize | nucleus | 47.74 | 35.68 |
| TraesCS1A01G375600.2 | Wheat | nucleus | 45.64 | 35.6 |
| CDY10674 | Canola | nucleus | 47.74 | 35.22 |
| CDY34229 | Canola | nucleus | 46.34 | 35.09 |
| TraesCS5A01G437900.1 | Wheat | nucleus | 42.16 | 34.97 |
| CDY10311 | Canola | nucleus | 47.04 | 34.79 |
| CDY21503 | Canola | nucleus | 42.16 | 34.67 |
| TraesCS5B01G440700.1 | Wheat | nucleus | 42.51 | 34.56 |
| CDY46607 | Canola | nucleus | 44.6 | 34.5 |
| TraesCS5D01G445100.1 | Wheat | nucleus | 41.81 | 34.48 |
| EER95940 | Sorghum | nucleus | 44.25 | 34.14 |
| CDY46606 | Canola | nucleus | 45.3 | 33.94 |
| GSMUA_Achr1P27200_001 | Banana | nucleus | 39.37 | 33.93 |
| Zm00001d018941_P001 | Maize | nucleus | 44.25 | 33.87 |
| Os07t0178600-01 | Rice | nucleus | 43.55 | 33.6 |
| CDX94884 | Canola | nucleus | 33.45 | 33.45 |
| HORVU5Hr1G094380.1 | Barley | nucleus | 43.21 | 33.42 |
| Zm00001d033987_P001 | Maize | nucleus | 41.81 | 32.34 |
| TraesCS5A01G383800.1 | Wheat | nucleus | 41.81 | 32.26 |
| TraesCS5D01G393200.1 | Wheat | nucleus | 42.16 | 32.1 |
| EER90889 | Sorghum | nucleus | 41.46 | 32.08 |
| CDX83217 | Canola | nucleus | 41.46 | 31.9 |
| TraesCS2B01G105100.1 | Wheat | nucleus | 44.6 | 31.6 |
| TraesCS3A01G405200.1 | Wheat | nucleus | 42.86 | 30.98 |
| TraesCS2D01G087400.1 | Wheat | nucleus | 44.25 | 30.83 |
| TraesCS2A01G089300.1 | Wheat | nucleus | 44.25 | 30.75 |
| HORVU2Hr1G014590.1 | Barley | nucleus | 44.6 | 30.62 |
| CDY43158 | Canola | nucleus | 32.4 | 30.39 |
| CDX92958 | Canola | nucleus | 35.19 | 29.36 |
| CDY13041 | Canola | nucleus | 30.66 | 28.66 |
| TraesCS3B01G438900.1 | Wheat | nucleus | 42.86 | 28.41 |
| CDX93024 | Canola | nucleus | 27.87 | 26.14 |
| CDY50608 | Canola | nucleus | 28.57 | 26.03 |
| CDY23108 | Canola | nucleus | 30.66 | 25.88 |
| CDX77420 | Canola | nucleus | 28.22 | 25.8 |
| CDY09259 | Canola | nucleus | 32.4 | 25.69 |
| CDY39545 | Canola | nucleus | 27.87 | 25.48 |
| CDX76506 | Canola | nucleus | 32.4 | 25.41 |
| CDX70290 | Canola | nucleus | 31.71 | 25.07 |
| CDX78797 | Canola | nucleus | 37.28 | 24.88 |
| CDX99415 | Canola | nucleus | 33.1 | 24.74 |
| CDY60785 | Canola | nucleus | 37.28 | 24.49 |
| CDY69818 | Canola | nucleus | 33.1 | 24.36 |
| CDY01562 | Canola | nucleus | 32.75 | 23.92 |
| CDX85486 | Canola | nucleus | 36.24 | 23.53 |
| CDY38085 | Canola | nucleus | 35.89 | 23.46 |
| CDY10361 | Canola | nucleus | 32.75 | 23.44 |
| CDY16977 | Canola | nucleus | 35.89 | 23.36 |
| HORVU5Hr1G105770.2 | Barley | nucleus | 42.16 | 23.22 |
| CDX92026 | Canola | nucleus | 36.24 | 23.21 |
| CDY58547 | Canola | nucleus | 36.24 | 22.91 |
| CDY28731 | Canola | nucleus | 34.15 | 22.48 |
| CDX74228 | Canola | nucleus | 35.19 | 22.2 |
| CDX93842 | Canola | nucleus | 37.63 | 22.18 |
| CDY01288 | Canola | nucleus | 37.63 | 21.95 |
| CDX69418 | Canola | nucleus | 36.24 | 21.36 |
| CDY12723 | Canola | nucleus | 33.45 | 20.21 |
| CDY01180 | Canola | nucleus | 32.75 | 19.71 |
| CDY44649 | Canola | nucleus | 31.36 | 18.95 |
| Zm00001d034433_P003 | Maize | nucleus | 40.42 | 18.68 |
| CDX78902 | Canola | nucleus | 32.4 | 17.99 |
| CDX84097 | Canola | nucleus | 5.57 | 5.95 |
| CDY43157 | Canola | cytosol | 1.74 | 5.56 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:15.5.13 | GO:A0A078DNS0 | EnsemblPlants:CDX90627 | ProteinID:CDX90627 | ProteinID:CDX90627.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00151271001 |
| InterPro:HSF_DNA-bd | InterPro:HSF_fam | InterPro:IPR036388 | PFAM:PF00447 | PRINTS:PR00056 | ScanProsite:PS00434 |
| PANTHER:PTHR10015 | PANTHER:PTHR10015:SF260 | SMART:SM00415 | SUPFAM:SSF46785 | UniParc:UPI0004EE9AA8 | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : | : |
Description
BnaA03g41540D
Coordinates
chrLK031863:-:1173596..1178286
Molecular Weight (calculated)
33570.2 Da
IEP (calculated)
7.092
GRAVY (calculated)
-0.654
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPFLHREND PPPSPPKPVE GLHEIGPPPF LIKTFEIVED PSTDHIVSWN RGGTSFVVWD LHSFSEFLLP RHFKHSNFSS FIRQLNTYGF RKIEAERWEF
101: ANEGFLLGQR HLLKSIKRRA SFALSSSSIQ DPCVELRKEK QLLLMELVSL RQQQETNKSY IKAMEQRIEG AERKQRKMMS FLARAMQSPS FLHQLLKQRD
201: MRVKELEDEA AERGRGSSSV SELEALALEM QGYGKQKNVK EEEDMVVERE LDDGFWEELL SNETPQHQIT FIIHFQIQKN KQFPKMV
101: ANEGFLLGQR HLLKSIKRRA SFALSSSSIQ DPCVELRKEK QLLLMELVSL RQQQETNKSY IKAMEQRIEG AERKQRKMMS FLARAMQSPS FLHQLLKQRD
201: MRVKELEDEA AERGRGSSSV SELEALALEM QGYGKQKNVK EEEDMVVERE LDDGFWEELL SNETPQHQIT FIIHFQIQKN KQFPKMV
001: MMNPFLPEGC DPPPPPQPME GLHENAPPPF LTKTFEMVDD PNTDHIVSWN RGGTSFVVWD LHSFSTILLP RHFKHSNFSS FIRQLNTYGF RKIEAERWEF
101: ANEEFLLGQR QLLKNIKRRN PFTPSSSPSH DACNELRREK QVLMMEIVSL RQQQQTTKSY IKAMEQRIEG TERKQRQMMS FLARAMQSPS FLHQLLKQRD
201: KKIKELEDNE SAKRKRGSSS MSELEVLALE MQGHGKQRNM LEEEDHQLVV ERELDDGFWE ELLSDESLAS TS
101: ANEEFLLGQR QLLKNIKRRN PFTPSSSPSH DACNELRREK QVLMMEIVSL RQQQQTTKSY IKAMEQRIEG TERKQRQMMS FLARAMQSPS FLHQLLKQRD
201: KKIKELEDNE SAKRKRGSSS MSELEVLALE MQGHGKQRNM LEEEDHQLVV ERELDDGFWE ELLSDESLAS TS
Arabidopsis Description
HSFA7AHeat stress transcription factor A-7a [Source:UniProtKB/Swiss-Prot;Acc:Q9SV12]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.